EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000010437 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: -
Full Name: CCR4-NOT transcription complex%2C subunit 3a
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 60817 bases
Position: chrFYBX02010632.1:553467-614283
Accession: ZDB-GENE-040927-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000016633	Not3	PF04065.15	2.8e-93	1	1
ENSEBUP00000016667	Not3	PF04065.15	2.8e-93	1	1
ENSEBUP00000016633	NOT2_3_5	PF04153.18	1e-39	1	1
ENSEBUP00000016667	NOT2_3_5	PF04153.18	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017242	-	4569	-	ENSEBUP00000016667	759 (aa)	-	-
ENSEBUT00000017210	-	4786	-	ENSEBUP00000016633	759 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010437	cnot3a	100	55.362	ENSG00000088038	CNOT3	100	80.682	Homo_sapiens
ENSEBUG00000010437	cnot3a	67	75.000	ENSAPOG00000015002	cnot3b	77	73.148	Acanthochromis_polyacanthus
ENSEBUG00000010437	cnot3a	55	76.518	ENSAPOG00000015499	CNOT3	75	70.000	Acanthochromis_polyacanthus
ENSEBUG00000010437	cnot3a	58	76.889	ENSACIG00000003652	cnot3b	75	76.444	Amphilophus_citrinellus
ENSEBUG00000010437	cnot3a	62	79.574	ENSACIG00000006635	cnot3a	84	74.525	Amphilophus_citrinellus
ENSEBUG00000010437	cnot3a	70	69.805	ENSAOCG00000023769	cnot3a	67	72.403	Amphiprion_ocellaris
ENSEBUG00000010437	cnot3a	59	75.000	ENSAOCG00000018385	-	77	68.750	Amphiprion_ocellaris
ENSEBUG00000010437	cnot3a	65	75.000	ENSAPEG00000002640	cnot3b	77	73.832	Amphiprion_percula
ENSEBUG00000010437	cnot3a	71	69.805	ENSAPEG00000006624	cnot3a	68	72.403	Amphiprion_percula
ENSEBUG00000010437	cnot3a	71	70.130	ENSATEG00000022737	cnot3a	71	72.403	Anabas_testudineus
ENSEBUG00000010437	cnot3a	99	68.506	ENSATEG00000015777	cnot3b	66	71.104	Anabas_testudineus
ENSEBUG00000010437	cnot3a	100	55.742	ENSACAG00000016085	CNOT3	100	57.106	Anolis_carolinensis
ENSEBUG00000010437	cnot3a	100	56.873	ENSANAG00000025756	CNOT3	100	56.577	Aotus_nancymaae
ENSEBUG00000010437	cnot3a	96	69.156	ENSACLG00000016702	cnot3b	67	71.753	Astatotilapia_calliptera
ENSEBUG00000010437	cnot3a	82	70.130	ENSACLG00000021136	cnot3a	71	72.727	Astatotilapia_calliptera
ENSEBUG00000010437	cnot3a	71	70.779	ENSAMXG00000012359	cnot3a	67	73.377	Astyanax_mexicanus
ENSEBUG00000010437	cnot3a	82	65.798	ENSAMXG00000009447	cnot3b	66	84.146	Astyanax_mexicanus
ENSEBUG00000010437	cnot3a	100	56.116	ENSCJAG00000001094	CNOT3	100	56.187	Callithrix_jacchus
ENSEBUG00000010437	cnot3a	100	55.499	ENSCAPG00000009533	CNOT3	100	56.466	Cavia_aperea
ENSEBUG00000010437	cnot3a	100	57.107	ENSCPOG00000020741	CNOT3	100	57.325	Cavia_porcellus
ENSEBUG00000010437	cnot3a	100	56.873	ENSCCAG00000036290	CNOT3	100	56.577	Cebus_capucinus
ENSEBUG00000010437	cnot3a	100	55.404	ENSCATG00000030324	CNOT3	100	56.352	Cercocebus_atys
ENSEBUG00000010437	cnot3a	100	57.487	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSEBUG00000010437	cnot3a	100	55.625	ENSCSAG00000001900	CNOT3	100	56.582	Chlorocebus_sabaeus
ENSEBUG00000010437	cnot3a	100	56.101	ENSCPBG00000011655	CNOT3	100	57.419	Chrysemys_picta_bellii
ENSEBUG00000010437	cnot3a	100	46.985	ENSCING00000000293	-	89	59.124	Ciona_intestinalis
ENSEBUG00000010437	cnot3a	100	55.625	ENSCANG00000013408	CNOT3	100	56.582	Colobus_angolensis_palliatus
ENSEBUG00000010437	cnot3a	100	56.841	ENSCGRG00001000855	Cnot3	100	56.855	Cricetulus_griseus_chok1gshd
ENSEBUG00000010437	cnot3a	52	60.648	ENSCGRG00000012929	Cnot3	68	60.185	Cricetulus_griseus_crigri
ENSEBUG00000010437	cnot3a	71	69.156	ENSCSEG00000003574	cnot3a	71	71.753	Cynoglossus_semilaevis
ENSEBUG00000010437	cnot3a	65	70.930	ENSCSEG00000016892	cnot3b	63	70.755	Cynoglossus_semilaevis
ENSEBUG00000010437	cnot3a	65	75.984	ENSCVAG00000008168	cnot3a	63	76.378	Cyprinodon_variegatus
ENSEBUG00000010437	cnot3a	71	67.532	ENSCVAG00000022122	cnot3b	57	72.857	Cyprinodon_variegatus
ENSEBUG00000010437	cnot3a	89	67.427	ENSDARG00000019842	cnot3b	73	70.684	Danio_rerio
ENSEBUG00000010437	cnot3a	100	55.485	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSEBUG00000010437	cnot3a	60	100.000	ENSETEG00000006305	CNOT3	61	100.000	Echinops_telfairi
ENSEBUG00000010437	cnot3a	82	68.285	ENSELUG00000000953	cnot3b	65	67.752	Esox_lucius
ENSEBUG00000010437	cnot3a	82	64.242	ENSELUG00000014743	cnot3a	69	65.758	Esox_lucius
ENSEBUG00000010437	cnot3a	100	56.352	ENSFCAG00000014042	CNOT3	100	57.106	Felis_catus
ENSEBUG00000010437	cnot3a	71	70.000	ENSFHEG00000023166	cnot3a	86	68.750	Fundulus_heteroclitus
ENSEBUG00000010437	cnot3a	82	67.532	ENSFHEG00000001696	cnot3b	56	72.170	Fundulus_heteroclitus
ENSEBUG00000010437	cnot3a	61	65.273	ENSGMOG00000005365	cnot3a	68	67.846	Gadus_morhua
ENSEBUG00000010437	cnot3a	71	70.724	ENSGAFG00000013094	cnot3a	71	69.737	Gambusia_affinis
ENSEBUG00000010437	cnot3a	71	69.008	ENSGAFG00000003459	cnot3b	61	69.481	Gambusia_affinis
ENSEBUG00000010437	cnot3a	64	64.217	ENSGACG00000011489	cnot3a	68	66.773	Gasterosteus_aculeatus
ENSEBUG00000010437	cnot3a	56	68.595	ENSGACG00000009395	cnot3b	52	73.636	Gasterosteus_aculeatus
ENSEBUG00000010437	cnot3a	99	55.428	ENSGAGG00000012677	CNOT3	99	55.397	Gopherus_agassizii
ENSEBUG00000010437	cnot3a	100	55.362	ENSGGOG00000012996	CNOT3	100	56.313	Gorilla_gorilla
ENSEBUG00000010437	cnot3a	82	70.130	ENSHBUG00000005275	cnot3a	71	72.727	Haplochromis_burtoni
ENSEBUG00000010437	cnot3a	62	73.148	ENSHBUG00000019699	cnot3b	53	73.148	Haplochromis_burtoni
ENSEBUG00000010437	cnot3a	63	69.349	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSEBUG00000010437	cnot3a	65	75.581	ENSHCOG00000020968	cnot3a	67	71.429	Hippocampus_comes
ENSEBUG00000010437	cnot3a	71	66.997	ENSIPUG00000000167	cnot3	70	67.434	Ictalurus_punctatus
ENSEBUG00000010437	cnot3a	100	57.503	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSEBUG00000010437	cnot3a	67	74.713	ENSKMAG00000004863	cnot3a	78	74.330	Kryptolebias_marmoratus
ENSEBUG00000010437	cnot3a	82	67.532	ENSKMAG00000018723	cnot3b	66	70.130	Kryptolebias_marmoratus
ENSEBUG00000010437	cnot3a	82	68.506	ENSLBEG00000018278	cnot3b	66	71.010	Labrus_bergylta
ENSEBUG00000010437	cnot3a	100	56.371	ENSLACG00000009742	CNOT3	100	56.868	Latimeria_chalumnae
ENSEBUG00000010437	cnot3a	67	68.831	ENSLOCG00000000005	cnot3b	75	83.537	Lepisosteus_oculatus
ENSEBUG00000010437	cnot3a	100	55.459	ENSMFAG00000040073	CNOT3	100	56.709	Macaca_fascicularis
ENSEBUG00000010437	cnot3a	100	55.031	ENSMNEG00000036750	CNOT3	100	55.975	Macaca_nemestrina
ENSEBUG00000010437	cnot3a	100	49.938	ENSMLEG00000036579	CNOT3	100	51.940	Mandrillus_leucophaeus
ENSEBUG00000010437	cnot3a	71	70.248	ENSMAMG00000019357	cnot3b	65	70.455	Mastacembelus_armatus
ENSEBUG00000010437	cnot3a	71	69.156	ENSMAMG00000019397	cnot3a	72	71.753	Mastacembelus_armatus
ENSEBUG00000010437	cnot3a	96	69.156	ENSMZEG00005002466	cnot3b	67	71.753	Maylandia_zebra
ENSEBUG00000010437	cnot3a	82	70.130	ENSMZEG00005016304	cnot3a	71	72.727	Maylandia_zebra
ENSEBUG00000010437	cnot3a	100	57.484	ENSMAUG00000014996	Cnot3	100	56.910	Mesocricetus_auratus
ENSEBUG00000010437	cnot3a	60	55.437	ENSMICG00000002370	CNOT3	100	56.329	Microcebus_murinus
ENSEBUG00000010437	cnot3a	67	100.000	ENSMOCG00000013249	Cnot3	93	100.000	Microtus_ochrogaster
ENSEBUG00000010437	cnot3a	59	75.000	ENSMMOG00000013086	cnot3b	75	73.148	Mola_mola
ENSEBUG00000010437	cnot3a	71	69.167	ENSMMOG00000016446	cnot3a	66	73.191	Mola_mola
ENSEBUG00000010437	cnot3a	81	74.312	ENSMALG00000004936	cnot3b	72	72.811	Monopterus_albus
ENSEBUG00000010437	cnot3a	71	69.481	ENSMALG00000009204	cnot3a	71	72.078	Monopterus_albus
ENSEBUG00000010437	cnot3a	100	56.366	MGP_CAROLIEiJ_G0029095	Cnot3	100	90.000	Mus_caroli
ENSEBUG00000010437	cnot3a	100	56.366	ENSMUSG00000035632	Cnot3	100	90.000	Mus_musculus
ENSEBUG00000010437	cnot3a	100	56.489	MGP_PahariEiJ_G0020964	Cnot3	100	90.000	Mus_pahari
ENSEBUG00000010437	cnot3a	100	56.366	MGP_SPRETEiJ_G0030148	Cnot3	100	90.000	Mus_spretus
ENSEBUG00000010437	cnot3a	100	55.846	ENSNGAG00000013266	Cnot3	100	56.890	Nannospalax_galili
ENSEBUG00000010437	cnot3a	81	73.832	ENSNBRG00000003336	cnot3b	87	68.313	Neolamprologus_brichardi
ENSEBUG00000010437	cnot3a	76	75.969	ENSNBRG00000002401	cnot3a	68	75.581	Neolamprologus_brichardi
ENSEBUG00000010437	cnot3a	56	100.000	ENSOPRG00000001605	-	70	67.742	Ochotona_princeps
ENSEBUG00000010437	cnot3a	100	55.843	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSEBUG00000010437	cnot3a	82	70.130	ENSONIG00000006568	cnot3a	75	72.727	Oreochromis_niloticus
ENSEBUG00000010437	cnot3a	100	56.587	ENSOCUG00000007691	CNOT3	100	57.580	Oryctolagus_cuniculus
ENSEBUG00000010437	cnot3a	100	70.684	ENSORLG00000011174	cnot3a	71	73.052	Oryzias_latipes
ENSEBUG00000010437	cnot3a	96	68.182	ENSORLG00000005982	cnot3b	68	70.779	Oryzias_latipes
ENSEBUG00000010437	cnot3a	82	70.358	ENSORLG00020008009	cnot3a	71	72.727	Oryzias_latipes_hni
ENSEBUG00000010437	cnot3a	71	70.417	ENSORLG00020005779	cnot3b	67	70.779	Oryzias_latipes_hni
ENSEBUG00000010437	cnot3a	82	70.358	ENSORLG00015013729	cnot3a	71	72.727	Oryzias_latipes_hsok
ENSEBUG00000010437	cnot3a	71	70.417	ENSORLG00015019021	cnot3b	67	70.779	Oryzias_latipes_hsok
ENSEBUG00000010437	cnot3a	96	71.104	ENSOMEG00000015557	cnot3b	68	70.779	Oryzias_melastigma
ENSEBUG00000010437	cnot3a	71	70.779	ENSOMEG00000010309	cnot3a	83	73.377	Oryzias_melastigma
ENSEBUG00000010437	cnot3a	100	56.131	ENSOGAG00000006945	CNOT3	100	56.544	Otolemur_garnettii
ENSEBUG00000010437	cnot3a	100	55.362	ENSPPAG00000002748	CNOT3	100	56.313	Pan_paniscus
ENSEBUG00000010437	cnot3a	100	56.352	ENSPPRG00000011705	CNOT3	100	57.106	Panthera_pardus
ENSEBUG00000010437	cnot3a	73	71.020	ENSPTIG00000008781	CNOT3	100	69.600	Panthera_tigris_altaica
ENSEBUG00000010437	cnot3a	100	55.362	ENSPTRG00000011444	CNOT3	100	56.313	Pan_troglodytes
ENSEBUG00000010437	cnot3a	100	55.362	ENSPTRG00000046717	-	100	56.313	Pan_troglodytes
ENSEBUG00000010437	cnot3a	100	55.404	ENSPANG00000009375	CNOT3	100	56.352	Papio_anubis
ENSEBUG00000010437	cnot3a	82	67.532	ENSPKIG00000011733	CNOT3	70	70.261	Paramormyrops_kingsleyae
ENSEBUG00000010437	cnot3a	62	77.447	ENSPKIG00000015967	-	100	73.518	Paramormyrops_kingsleyae
ENSEBUG00000010437	cnot3a	59	72.689	ENSPMGG00000022539	cnot3b	56	72.941	Periophthalmus_magnuspinnatus
ENSEBUG00000010437	cnot3a	100	57.322	ENSPEMG00000024185	Cnot3	100	56.582	Peromyscus_maniculatus_bairdii
ENSEBUG00000010437	cnot3a	71	73.391	ENSPCIG00000023018	CNOT3	84	87.195	Phascolarctos_cinereus
ENSEBUG00000010437	cnot3a	82	67.208	ENSPFOG00000007168	cnot3b	67	69.805	Poecilia_formosa
ENSEBUG00000010437	cnot3a	71	70.724	ENSPFOG00000008693	cnot3a	100	54.239	Poecilia_formosa
ENSEBUG00000010437	cnot3a	84	72.093	ENSPLAG00000013457	cnot3b	67	69.805	Poecilia_latipinna
ENSEBUG00000010437	cnot3a	71	70.724	ENSPLAG00000013324	cnot3a	71	69.737	Poecilia_latipinna
ENSEBUG00000010437	cnot3a	71	70.724	ENSPMEG00000017718	cnot3a	67	69.737	Poecilia_mexicana
ENSEBUG00000010437	cnot3a	84	72.093	ENSPMEG00000010184	cnot3b	67	69.805	Poecilia_mexicana
ENSEBUG00000010437	cnot3a	72	65.900	ENSPREG00000000662	cnot3b	57	67.355	Poecilia_reticulata
ENSEBUG00000010437	cnot3a	68	74.537	ENSPREG00000007592	cnot3a	80	75.794	Poecilia_reticulata
ENSEBUG00000010437	cnot3a	100	55.237	ENSPPYG00000010372	CNOT3	100	56.187	Pongo_abelii
ENSEBUG00000010437	cnot3a	78	94.017	ENSPCAG00000011999	CNOT3	75	93.220	Procavia_capensis
ENSEBUG00000010437	cnot3a	100	56.045	ENSPVAG00000015564	CNOT3	100	55.680	Pteropus_vampyrus
ENSEBUG00000010437	cnot3a	82	70.130	ENSPNYG00000002282	cnot3a	71	72.727	Pundamilia_nyererei
ENSEBUG00000010437	cnot3a	62	72.868	ENSPNYG00000003358	cnot3b	54	73.626	Pundamilia_nyererei
ENSEBUG00000010437	cnot3a	71	70.455	ENSPNAG00000017679	cnot3a	70	73.052	Pygocentrus_nattereri
ENSEBUG00000010437	cnot3a	93	68.078	ENSPNAG00000027459	cnot3b	71	70.684	Pygocentrus_nattereri
ENSEBUG00000010437	cnot3a	100	56.242	ENSRNOG00000053234	Cnot3	100	57.433	Rattus_norvegicus
ENSEBUG00000010437	cnot3a	100	55.945	ENSRBIG00000031025	CNOT3	100	56.456	Rhinopithecus_bieti
ENSEBUG00000010437	cnot3a	100	56.070	ENSRROG00000003872	CNOT3	100	56.456	Rhinopithecus_roxellana
ENSEBUG00000010437	cnot3a	100	56.266	ENSSBOG00000030268	CNOT3	100	56.242	Saimiri_boliviensis_boliviensis
ENSEBUG00000010437	cnot3a	82	68.182	ENSSFOG00015019203	-	68	70.779	Scleropages_formosus
ENSEBUG00000010437	cnot3a	71	69.421	ENSSMAG00000013235	cnot3a	71	71.753	Scophthalmus_maximus
ENSEBUG00000010437	cnot3a	82	67.857	ENSSMAG00000016031	cnot3b	66	70.455	Scophthalmus_maximus
ENSEBUG00000010437	cnot3a	62	79.149	ENSSDUG00000008181	cnot3a	97	73.764	Seriola_dumerili
ENSEBUG00000010437	cnot3a	82	68.182	ENSSDUG00000003428	cnot3b	65	70.779	Seriola_dumerili
ENSEBUG00000010437	cnot3a	67	69.481	ENSSLDG00000014733	cnot3a	70	72.078	Seriola_lalandi_dorsalis
ENSEBUG00000010437	cnot3a	82	68.182	ENSSLDG00000014376	cnot3b	65	70.779	Seriola_lalandi_dorsalis
ENSEBUG00000010437	cnot3a	100	55.995	ENSSPUG00000008510	CNOT3	100	57.161	Sphenodon_punctatus
ENSEBUG00000010437	cnot3a	82	68.182	ENSSPAG00000001429	cnot3b	65	70.779	Stegastes_partitus
ENSEBUG00000010437	cnot3a	65	75.194	ENSSPAG00000003858	cnot3a	82	72.078	Stegastes_partitus
ENSEBUG00000010437	cnot3a	71	69.583	ENSTRUG00000015732	cnot3a	72	71.753	Takifugu_rubripes
ENSEBUG00000010437	cnot3a	61	65.909	ENSTNIG00000005663	cnot3b	58	64.080	Tetraodon_nigroviridis
ENSEBUG00000010437	cnot3a	64	68.078	ENSTNIG00000008082	cnot3a	82	70.861	Tetraodon_nigroviridis
ENSEBUG00000010437	cnot3a	50	93.985	ENSTBEG00000009620	-	54	93.985	Tupaia_belangeri
ENSEBUG00000010437	cnot3a	77	64.815	ENSUMAG00000010934	CNOT3	86	77.311	Ursus_maritimus
ENSEBUG00000010437	cnot3a	99	56.140	ENSVVUG00000008239	CNOT3	99	54.967	Vulpes_vulpes
ENSEBUG00000010437	cnot3a	100	53.000	ENSXETG00000003166	cnot3	100	56.113	Xenopus_tropicalis
ENSEBUG00000010437	cnot3a	71	69.583	ENSXCOG00000019460	cnot3a	87	73.282	Xiphophorus_couchianus
ENSEBUG00000010437	cnot3a	57	71.705	ENSXCOG00000018976	cnot3b	61	67.778	Xiphophorus_couchianus
ENSEBUG00000010437	cnot3a	82	66.883	ENSXMAG00000014176	cnot3b	59	69.481	Xiphophorus_maculatus
ENSEBUG00000010437	cnot3a	71	70.724	ENSXMAG00000012273	cnot3a	71	69.737	Xiphophorus_maculatus