EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000010470 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 20152 bases
Position: chrFYBX02010137.1:1428997-1449148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000016689	LSM	PF01423.22	8.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017265	-	312	-	ENSEBUP00000016689	103 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000010470	-	79	60.241	ENSEBUG00000016992	lsm7	80	60.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010470	-	79	59.036	ENSG00000130332	LSM7	80	61.538	Homo_sapiens
ENSEBUG00000010470	-	78	58.537	ENSAPOG00000015573	lsm7	71	58.537	Acanthochromis_polyacanthus
ENSEBUG00000010470	-	79	57.831	ENSAMEG00000005484	LSM7	81	57.831	Ailuropoda_melanoleuca
ENSEBUG00000010470	-	79	59.036	ENSACIG00000006498	lsm7	66	59.036	Amphilophus_citrinellus
ENSEBUG00000010470	-	79	59.036	ENSAOCG00000001077	lsm7	75	59.036	Amphiprion_ocellaris
ENSEBUG00000010470	-	79	59.036	ENSAPEG00000000694	lsm7	81	59.036	Amphiprion_percula
ENSEBUG00000010470	-	79	59.036	ENSAPEG00000024447	lsm7	75	59.036	Amphiprion_percula
ENSEBUG00000010470	-	79	59.036	ENSATEG00000008557	lsm7	81	59.036	Anabas_testudineus
ENSEBUG00000010470	-	79	59.036	ENSANAG00000037196	-	81	59.036	Aotus_nancymaae
ENSEBUG00000010470	-	79	55.556	ENSANAG00000022222	-	79	55.556	Aotus_nancymaae
ENSEBUG00000010470	-	79	59.036	ENSACLG00000021021	lsm7	81	59.036	Astatotilapia_calliptera
ENSEBUG00000010470	-	79	59.036	ENSAMXG00000037622	lsm7	81	59.036	Astyanax_mexicanus
ENSEBUG00000010470	-	79	59.036	ENSBTAG00000004521	LSM7	81	59.036	Bos_taurus
ENSEBUG00000010470	-	83	51.724	WBGene00003081	lsm-7	84	51.724	Caenorhabditis_elegans
ENSEBUG00000010470	-	79	57.831	ENSCAFG00000019409	LSM7	81	57.831	Canis_familiaris
ENSEBUG00000010470	-	79	57.831	ENSCAFG00020018168	LSM7	61	57.831	Canis_lupus_dingo
ENSEBUG00000010470	-	79	59.036	ENSCHIG00000023663	LSM7	81	59.036	Capra_hircus
ENSEBUG00000010470	-	61	61.538	ENSCAPG00000014534	LSM7	92	61.538	Cavia_aperea
ENSEBUG00000010470	-	79	59.036	ENSCPOG00000014025	LSM7	82	59.036	Cavia_porcellus
ENSEBUG00000010470	-	79	59.036	ENSCCAG00000035456	LSM7	81	59.036	Cebus_capucinus
ENSEBUG00000010470	-	79	59.036	ENSCATG00000023543	LSM7	81	59.036	Cercocebus_atys
ENSEBUG00000010470	-	79	59.036	ENSCLAG00000011635	LSM7	81	59.036	Chinchilla_lanigera
ENSEBUG00000010470	-	79	59.036	ENSCSAG00000011599	LSM7	81	59.036	Chlorocebus_sabaeus
ENSEBUG00000010470	-	61	63.077	ENSCPBG00000021317	LSM7	69	63.077	Chrysemys_picta_bellii
ENSEBUG00000010470	-	79	57.831	ENSCING00000022134	-	84	57.831	Ciona_intestinalis
ENSEBUG00000010470	-	79	59.036	ENSCANG00000035525	LSM7	81	59.036	Colobus_angolensis_palliatus
ENSEBUG00000010470	-	69	49.315	ENSCGRG00001016005	-	76	49.315	Cricetulus_griseus_chok1gshd
ENSEBUG00000010470	-	79	59.036	ENSCGRG00001000807	-	81	59.036	Cricetulus_griseus_chok1gshd
ENSEBUG00000010470	-	69	49.315	ENSCGRG00000006821	-	76	49.315	Cricetulus_griseus_crigri
ENSEBUG00000010470	-	79	59.036	ENSCGRG00000014355	-	80	59.036	Cricetulus_griseus_crigri
ENSEBUG00000010470	-	79	59.036	ENSCSEG00000014900	lsm7	70	59.036	Cynoglossus_semilaevis
ENSEBUG00000010470	-	79	59.036	ENSCVAG00000021091	lsm7	77	59.036	Cyprinodon_variegatus
ENSEBUG00000010470	-	79	60.241	ENSDARG00000058328	lsm7	81	60.241	Danio_rerio
ENSEBUG00000010470	-	79	57.831	ENSDORG00000024460	Lsm7	81	57.831	Dipodomys_ordii
ENSEBUG00000010470	-	79	58.333	FBgn0261068	LSm7	76	58.333	Drosophila_melanogaster
ENSEBUG00000010470	-	79	57.831	ENSETEG00000012788	LSM7	81	57.831	Echinops_telfairi
ENSEBUG00000010470	-	79	59.036	ENSECAG00000001440	LSM7	53	59.036	Equus_caballus
ENSEBUG00000010470	-	79	57.831	ENSFCAG00000003445	LSM7	81	57.831	Felis_catus
ENSEBUG00000010470	-	79	59.036	ENSFALG00000011912	LSM7	82	59.036	Ficedula_albicollis
ENSEBUG00000010470	-	79	59.036	ENSFDAG00000007661	LSM7	86	59.036	Fukomys_damarensis
ENSEBUG00000010470	-	79	59.036	ENSFHEG00000006349	lsm7	74	59.036	Fundulus_heteroclitus
ENSEBUG00000010470	-	79	57.831	ENSGMOG00000013320	lsm7	81	57.831	Gadus_morhua
ENSEBUG00000010470	-	79	59.036	ENSGAFG00000013902	lsm7	81	59.036	Gambusia_affinis
ENSEBUG00000010470	-	79	59.036	ENSGACG00000010390	lsm7	81	59.036	Gasterosteus_aculeatus
ENSEBUG00000010470	-	79	59.036	ENSGGOG00000010172	LSM7	81	59.036	Gorilla_gorilla
ENSEBUG00000010470	-	79	59.036	ENSHBUG00000004616	lsm7	81	59.036	Haplochromis_burtoni
ENSEBUG00000010470	-	79	59.036	ENSHGLG00000010587	LSM7	81	59.036	Heterocephalus_glaber_female
ENSEBUG00000010470	-	79	59.036	ENSHGLG00100000852	LSM7	81	59.036	Heterocephalus_glaber_male
ENSEBUG00000010470	-	79	59.036	ENSHCOG00000020252	lsm7	82	59.036	Hippocampus_comes
ENSEBUG00000010470	-	79	59.036	ENSIPUG00000024724	lsm7	81	59.036	Ictalurus_punctatus
ENSEBUG00000010470	-	79	59.036	ENSSTOG00000028372	LSM7	81	59.036	Ictidomys_tridecemlineatus
ENSEBUG00000010470	-	79	59.036	ENSJJAG00000001936	Lsm7	81	59.036	Jaculus_jaculus
ENSEBUG00000010470	-	79	59.036	ENSKMAG00000022151	lsm7	81	59.036	Kryptolebias_marmoratus
ENSEBUG00000010470	-	79	59.036	ENSLBEG00000005203	lsm7	81	59.036	Labrus_bergylta
ENSEBUG00000010470	-	79	59.036	ENSLACG00000015700	LSM7	81	59.036	Latimeria_chalumnae
ENSEBUG00000010470	-	79	59.036	ENSLOCG00000004356	lsm7	81	59.036	Lepisosteus_oculatus
ENSEBUG00000010470	-	79	59.036	ENSLAFG00000029302	LSM7	81	59.036	Loxodonta_africana
ENSEBUG00000010470	-	79	59.036	ENSMFAG00000044572	LSM7	81	59.036	Macaca_fascicularis
ENSEBUG00000010470	-	79	59.036	ENSMMUG00000000452	LSM7	81	59.036	Macaca_mulatta
ENSEBUG00000010470	-	79	59.036	ENSMNEG00000004393	LSM7	81	59.036	Macaca_nemestrina
ENSEBUG00000010470	-	79	59.036	ENSMLEG00000030852	LSM7	82	59.036	Mandrillus_leucophaeus
ENSEBUG00000010470	-	79	59.036	ENSMAMG00000005410	lsm7	81	59.036	Mastacembelus_armatus
ENSEBUG00000010470	-	79	59.036	ENSMZEG00005028055	lsm7	81	59.036	Maylandia_zebra
ENSEBUG00000010470	-	79	60.241	ENSMGAG00000000750	LSM7	72	60.241	Meleagris_gallopavo
ENSEBUG00000010470	-	79	59.036	ENSMAUG00000009276	Lsm7	81	59.036	Mesocricetus_auratus
ENSEBUG00000010470	-	79	59.036	ENSMICG00000028619	-	81	59.036	Microcebus_murinus
ENSEBUG00000010470	-	79	59.036	ENSMICG00000009988	-	81	59.036	Microcebus_murinus
ENSEBUG00000010470	-	79	59.036	ENSMOCG00000016925	Lsm7	81	59.036	Microtus_ochrogaster
ENSEBUG00000010470	-	79	59.036	ENSMMOG00000019645	lsm7	79	59.036	Mola_mola
ENSEBUG00000010470	-	79	59.036	ENSMODG00000004722	LSM7	81	59.036	Monodelphis_domestica
ENSEBUG00000010470	-	79	59.036	ENSMALG00000014511	lsm7	64	59.036	Monopterus_albus
ENSEBUG00000010470	-	79	57.831	MGP_CAROLIEiJ_G0015607	Lsm7	81	57.831	Mus_caroli
ENSEBUG00000010470	-	79	57.831	ENSMUSG00000035215	Lsm7	81	57.831	Mus_musculus
ENSEBUG00000010470	-	79	57.831	MGP_PahariEiJ_G0031020	Lsm7	81	57.831	Mus_pahari
ENSEBUG00000010470	-	79	57.831	MGP_SPRETEiJ_G0016425	Lsm7	81	57.831	Mus_spretus
ENSEBUG00000010470	-	79	59.036	ENSMLUG00000013097	-	81	59.036	Myotis_lucifugus
ENSEBUG00000010470	-	79	61.446	ENSMLUG00000024002	-	77	61.446	Myotis_lucifugus
ENSEBUG00000010470	-	79	59.036	ENSNGAG00000021637	Lsm7	81	59.036	Nannospalax_galili
ENSEBUG00000010470	-	79	59.036	ENSNBRG00000015770	lsm7	72	59.036	Neolamprologus_brichardi
ENSEBUG00000010470	-	79	59.036	ENSNBRG00000001237	-	66	59.036	Neolamprologus_brichardi
ENSEBUG00000010470	-	79	59.036	ENSNLEG00000002265	LSM7	81	59.036	Nomascus_leucogenys
ENSEBUG00000010470	-	79	44.578	ENSODEG00000008190	-	79	44.578	Octodon_degus
ENSEBUG00000010470	-	79	59.036	ENSODEG00000013590	-	81	59.036	Octodon_degus
ENSEBUG00000010470	-	77	54.321	ENSODEG00000018769	-	79	54.321	Octodon_degus
ENSEBUG00000010470	-	79	59.036	ENSONIG00000001801	lsm7	72	59.036	Oreochromis_niloticus
ENSEBUG00000010470	-	79	59.036	ENSORLG00000023951	lsm7	81	59.036	Oryzias_latipes
ENSEBUG00000010470	-	79	59.036	ENSORLG00020022226	lsm7	81	59.036	Oryzias_latipes_hni
ENSEBUG00000010470	-	79	59.036	ENSORLG00015020044	lsm7	77	59.036	Oryzias_latipes_hsok
ENSEBUG00000010470	-	79	59.036	ENSOMEG00000012806	lsm7	81	59.036	Oryzias_melastigma
ENSEBUG00000010470	-	79	51.807	ENSOGAG00000024373	-	81	51.807	Otolemur_garnettii
ENSEBUG00000010470	-	79	59.036	ENSOGAG00000000144	-	81	59.036	Otolemur_garnettii
ENSEBUG00000010470	-	79	59.036	ENSOARG00000014013	LSM7	81	59.036	Ovis_aries
ENSEBUG00000010470	-	79	59.036	ENSPPAG00000026500	LSM7	81	59.036	Pan_paniscus
ENSEBUG00000010470	-	79	57.831	ENSPPRG00000008624	LSM7	81	57.831	Panthera_pardus
ENSEBUG00000010470	-	79	57.831	ENSPTIG00000016252	LSM7	81	57.831	Panthera_tigris_altaica
ENSEBUG00000010470	-	79	59.036	ENSPTRG00000010233	LSM7	81	59.036	Pan_troglodytes
ENSEBUG00000010470	-	79	59.036	ENSPANG00000020668	LSM7	81	59.036	Papio_anubis
ENSEBUG00000010470	-	79	60.241	ENSPKIG00000011325	lsm7	81	60.241	Paramormyrops_kingsleyae
ENSEBUG00000010470	-	79	60.241	ENSPSIG00000017149	LSM7	73	60.241	Pelodiscus_sinensis
ENSEBUG00000010470	-	79	59.036	ENSPMGG00000006498	lsm7	81	59.036	Periophthalmus_magnuspinnatus
ENSEBUG00000010470	-	79	59.036	ENSPCIG00000030454	LSM7	81	59.036	Phascolarctos_cinereus
ENSEBUG00000010470	-	79	59.036	ENSPFOG00000012467	lsm7	73	59.036	Poecilia_formosa
ENSEBUG00000010470	-	79	59.036	ENSPLAG00000000252	lsm7	77	59.036	Poecilia_latipinna
ENSEBUG00000010470	-	79	59.036	ENSPMEG00000000587	lsm7	77	59.036	Poecilia_mexicana
ENSEBUG00000010470	-	79	59.036	ENSPCOG00000017177	LSM7	81	59.036	Propithecus_coquereli
ENSEBUG00000010470	-	79	59.036	ENSPNYG00000006938	lsm7	81	59.036	Pundamilia_nyererei
ENSEBUG00000010470	-	79	59.036	ENSPNAG00000010141	lsm7	81	59.036	Pygocentrus_nattereri
ENSEBUG00000010470	-	79	59.036	ENSRNOG00000019552	Lsm7	81	59.036	Rattus_norvegicus
ENSEBUG00000010470	-	79	59.036	ENSRBIG00000035978	LSM7	81	59.036	Rhinopithecus_bieti
ENSEBUG00000010470	-	79	59.036	ENSRROG00000034044	LSM7	81	59.036	Rhinopithecus_roxellana
ENSEBUG00000010470	-	71	39.744	YNL147W	-	68	39.744	Saccharomyces_cerevisiae
ENSEBUG00000010470	-	79	59.036	ENSSBOG00000034899	LSM7	81	59.036	Saimiri_boliviensis_boliviensis
ENSEBUG00000010470	-	80	58.333	ENSSFOG00015006728	lsm7	81	59.036	Scleropages_formosus
ENSEBUG00000010470	-	79	59.036	ENSSMAG00000004195	lsm7	76	59.036	Scophthalmus_maximus
ENSEBUG00000010470	-	79	59.036	ENSSDUG00000001863	lsm7	81	59.036	Seriola_dumerili
ENSEBUG00000010470	-	79	59.036	ENSSLDG00000016339	lsm7	81	59.036	Seriola_lalandi_dorsalis
ENSEBUG00000010470	-	79	59.036	ENSSPAG00000015221	lsm7	81	59.036	Stegastes_partitus
ENSEBUG00000010470	-	79	59.036	ENSSSCG00000013463	LSM7	81	59.036	Sus_scrofa
ENSEBUG00000010470	-	79	59.036	ENSTGUG00000000067	LSM7	82	59.036	Taeniopygia_guttata
ENSEBUG00000010470	-	79	59.036	ENSTRUG00000022913	lsm7	81	59.036	Takifugu_rubripes
ENSEBUG00000010470	-	79	59.036	ENSTNIG00000015525	lsm7	81	59.036	Tetraodon_nigroviridis
ENSEBUG00000010470	-	59	55.556	ENSTBEG00000016602	LSM7	90	55.556	Tupaia_belangeri
ENSEBUG00000010470	-	79	57.831	ENSUAMG00000000912	LSM7	69	57.831	Ursus_americanus
ENSEBUG00000010470	-	79	57.831	ENSUMAG00000006556	LSM7	65	57.831	Ursus_maritimus
ENSEBUG00000010470	-	61	60.000	ENSVVUG00000002640	LSM7	60	60.000	Vulpes_vulpes
ENSEBUG00000010470	-	79	60.241	ENSXETG00000022166	lsm7	82	60.241	Xenopus_tropicalis
ENSEBUG00000010470	-	79	59.036	ENSXCOG00000002572	lsm7	81	59.036	Xiphophorus_couchianus
ENSEBUG00000010470	-	79	59.036	ENSXMAG00000018630	lsm7	81	59.036	Xiphophorus_maculatus