EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000010481 (Gene tree)
Gene ID: -
Gene Symbol: TDRKH
Alias: TDRD2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 114702 bases
Position: chrFYBX02009613.1:1198128-1312829
Accession: 11713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000016702	KH_1	PF00013.29	4.4e-29	1	2
ENSEBUP00000016702	KH_1	PF00013.29	4.4e-29	2	2
ENSEBUP00000016722	KH_1	PF00013.29	5.5e-29	1	2
ENSEBUP00000016722	KH_1	PF00013.29	5.5e-29	2	2
ENSEBUP00000016702	TUDOR	PF00567.24	8.9e-28	1	1
ENSEBUP00000016722	TUDOR	PF00567.24	1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017278	TDRKH-201	1849	-	ENSEBUP00000016702	556 (aa)	-	-
ENSEBUT00000017298	TDRKH-202	2103	-	ENSEBUP00000016722	597 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010481	TDRKH	83	35.867	ENSG00000182134	TDRKH	95	32.639	Homo_sapiens
ENSEBUG00000010481	TDRKH	87	36.667	ENSAMEG00000000421	TDRKH	90	36.852	Ailuropoda_melanoleuca
ENSEBUG00000010481	TDRKH	80	36.550	ENSACAG00000007457	TDRKH	93	36.550	Anolis_carolinensis
ENSEBUG00000010481	TDRKH	89	36.229	ENSANAG00000021663	TDRKH	94	37.673	Aotus_nancymaae
ENSEBUG00000010481	TDRKH	83	37.037	ENSBTAG00000021594	TDRKH	87	37.232	Bos_taurus
ENSEBUG00000010481	TDRKH	83	37.278	ENSCJAG00000007955	TDRKH	94	37.475	Callithrix_jacchus
ENSEBUG00000010481	TDRKH	83	36.576	ENSCAFG00000012856	TDRKH	87	36.699	Canis_familiaris
ENSEBUG00000010481	TDRKH	83	36.505	ENSCAFG00020009606	TDRKH	87	36.699	Canis_lupus_dingo
ENSEBUG00000010481	TDRKH	83	37.037	ENSCHIG00000025326	TDRKH	87	37.232	Capra_hircus
ENSEBUG00000010481	TDRKH	83	37.278	ENSTSYG00000010405	TDRKH	86	37.475	Carlito_syrichta
ENSEBUG00000010481	TDRKH	83	34.585	ENSCAPG00000007565	TDRKH	91	34.783	Cavia_aperea
ENSEBUG00000010481	TDRKH	83	36.561	ENSCPOG00000003556	TDRKH	86	36.759	Cavia_porcellus
ENSEBUG00000010481	TDRKH	89	36.229	ENSCCAG00000033931	TDRKH	94	37.475	Cebus_capucinus
ENSEBUG00000010481	TDRKH	83	36.062	ENSCATG00000041878	TDRKH	94	36.257	Cercocebus_atys
ENSEBUG00000010481	TDRKH	83	36.561	ENSCLAG00000001088	TDRKH	86	36.759	Chinchilla_lanigera
ENSEBUG00000010481	TDRKH	83	36.062	ENSCSAG00000001820	TDRKH	86	36.257	Chlorocebus_sabaeus
ENSEBUG00000010481	TDRKH	55	35.457	ENSCHOG00000000264	TDRKH	66	35.734	Choloepus_hoffmanni
ENSEBUG00000010481	TDRKH	83	37.924	ENSCPBG00000008824	TDRKH	80	38.048	Chrysemys_picta_bellii
ENSEBUG00000010481	TDRKH	83	36.842	ENSCANG00000037367	TDRKH	94	37.037	Colobus_angolensis_palliatus
ENSEBUG00000010481	TDRKH	83	30.398	ENSCGRG00001011699	-	87	30.398	Cricetulus_griseus_chok1gshd
ENSEBUG00000010481	TDRKH	84	36.364	ENSCGRG00001006583	-	88	36.557	Cricetulus_griseus_chok1gshd
ENSEBUG00000010481	TDRKH	84	36.364	ENSCGRG00000012937	-	88	36.557	Cricetulus_griseus_crigri
ENSEBUG00000010481	TDRKH	83	30.398	ENSCGRG00000013230	-	87	30.398	Cricetulus_griseus_crigri
ENSEBUG00000010481	TDRKH	83	36.220	ENSDNOG00000035650	TDRKH	94	36.417	Dasypus_novemcinctus
ENSEBUG00000010481	TDRKH	83	37.278	ENSDORG00000015322	Tdrkh	86	37.475	Dipodomys_ordii
ENSEBUG00000010481	TDRKH	83	34.825	ENSETEG00000008020	TDRKH	87	34.825	Echinops_telfairi
ENSEBUG00000010481	TDRKH	87	37.218	ENSEASG00005005213	TDRKH	91	37.406	Equus_asinus_asinus
ENSEBUG00000010481	TDRKH	87	35.993	ENSECAG00000013096	TDRKH	94	36.647	Equus_caballus
ENSEBUG00000010481	TDRKH	64	40.404	ENSEEUG00000015952	TDRKH	62	40.404	Erinaceus_europaeus
ENSEBUG00000010481	TDRKH	83	36.770	ENSFCAG00000010980	TDRKH	86	36.965	Felis_catus
ENSEBUG00000010481	TDRKH	83	35.478	ENSFDAG00000015315	TDRKH	86	35.673	Fukomys_damarensis
ENSEBUG00000010481	TDRKH	83	37.008	ENSGALG00000031812	TDRKH	86	37.008	Gallus_gallus
ENSEBUG00000010481	TDRKH	83	37.822	ENSGAGG00000005447	TDRKH	86	38.020	Gopherus_agassizii
ENSEBUG00000010481	TDRKH	83	36.062	ENSGGOG00000025419	TDRKH	94	36.452	Gorilla_gorilla
ENSEBUG00000010481	TDRKH	83	37.008	ENSHGLG00000007478	TDRKH	86	37.008	Heterocephalus_glaber_female
ENSEBUG00000010481	TDRKH	83	37.008	ENSHGLG00100007927	TDRKH	86	37.008	Heterocephalus_glaber_male
ENSEBUG00000010481	TDRKH	83	36.489	ENSSTOG00000006506	TDRKH	86	36.686	Ictidomys_tridecemlineatus
ENSEBUG00000010481	TDRKH	83	36.957	ENSJJAG00000000323	Tdrkh	86	37.154	Jaculus_jaculus
ENSEBUG00000010481	TDRKH	68	34.353	ENSLACG00000017639	TDRKH	98	35.529	Latimeria_chalumnae
ENSEBUG00000010481	TDRKH	83	36.561	ENSLAFG00000006274	TDRKH	87	37.154	Loxodonta_africana
ENSEBUG00000010481	TDRKH	83	36.062	ENSMFAG00000041641	TDRKH	94	36.257	Macaca_fascicularis
ENSEBUG00000010481	TDRKH	83	36.062	ENSMMUG00000009096	TDRKH	94	36.257	Macaca_mulatta
ENSEBUG00000010481	TDRKH	83	36.062	ENSMNEG00000021524	TDRKH	94	36.257	Macaca_nemestrina
ENSEBUG00000010481	TDRKH	83	36.062	ENSMLEG00000033882	TDRKH	94	36.257	Mandrillus_leucophaeus
ENSEBUG00000010481	TDRKH	83	36.399	ENSMAUG00000019159	Tdrkh	86	36.595	Mesocricetus_auratus
ENSEBUG00000010481	TDRKH	84	31.590	ENSMICG00000042330	-	92	32.520	Microcebus_murinus
ENSEBUG00000010481	TDRKH	83	37.081	ENSMICG00000010682	-	86	37.278	Microcebus_murinus
ENSEBUG00000010481	TDRKH	79	30.435	ENSMOCG00000014074	-	87	30.303	Microtus_ochrogaster
ENSEBUG00000010481	TDRKH	83	35.742	ENSMOCG00000002113	-	88	35.938	Microtus_ochrogaster
ENSEBUG00000010481	TDRKH	84	35.397	ENSMODG00000018906	TDRKH	85	35.619	Monodelphis_domestica
ENSEBUG00000010481	TDRKH	83	36.257	MGP_CAROLIEiJ_G0025310	Tdrkh	87	36.452	Mus_caroli
ENSEBUG00000010481	TDRKH	83	36.452	ENSMUSG00000041912	Tdrkh	87	36.647	Mus_musculus
ENSEBUG00000010481	TDRKH	83	36.452	MGP_PahariEiJ_G0026753	Tdrkh	87	36.647	Mus_pahari
ENSEBUG00000010481	TDRKH	83	36.452	MGP_SPRETEiJ_G0026252	Tdrkh	87	36.647	Mus_spretus
ENSEBUG00000010481	TDRKH	83	36.791	ENSMPUG00000003558	TDRKH	86	36.914	Mustela_putorius_furo
ENSEBUG00000010481	TDRKH	83	36.452	ENSMLUG00000002213	TDRKH	86	36.647	Myotis_lucifugus
ENSEBUG00000010481	TDRKH	83	37.081	ENSNGAG00000017825	Tdrkh	87	37.278	Nannospalax_galili
ENSEBUG00000010481	TDRKH	83	36.062	ENSNLEG00000010284	TDRKH	94	36.257	Nomascus_leucogenys
ENSEBUG00000010481	TDRKH	55	35.574	ENSMEUG00000006144	TDRKH	63	35.574	Notamacropus_eugenii
ENSEBUG00000010481	TDRKH	58	37.067	ENSOPRG00000016049	TDRKH	67	37.067	Ochotona_princeps
ENSEBUG00000010481	TDRKH	83	37.426	ENSODEG00000009532	-	86	37.426	Octodon_degus
ENSEBUG00000010481	TDRKH	83	36.364	ENSODEG00000001075	-	86	36.957	Octodon_degus
ENSEBUG00000010481	TDRKH	83	36.926	ENSOCUG00000001387	TDRKH	86	36.926	Oryctolagus_cuniculus
ENSEBUG00000010481	TDRKH	50	30.824	ENSOGAG00000030085	-	85	30.824	Otolemur_garnettii
ENSEBUG00000010481	TDRKH	83	32.731	ENSOGAG00000032601	-	86	32.866	Otolemur_garnettii
ENSEBUG00000010481	TDRKH	83	34.109	ENSOGAG00000001839	-	87	34.302	Otolemur_garnettii
ENSEBUG00000010481	TDRKH	83	37.037	ENSOARG00000021052	TDRKH	87	37.232	Ovis_aries
ENSEBUG00000010481	TDRKH	83	36.062	ENSPPAG00000028994	TDRKH	86	36.257	Pan_paniscus
ENSEBUG00000010481	TDRKH	83	36.770	ENSPPRG00000001585	TDRKH	86	36.965	Panthera_pardus
ENSEBUG00000010481	TDRKH	83	36.770	ENSPTIG00000019916	TDRKH	86	36.965	Panthera_tigris_altaica
ENSEBUG00000010481	TDRKH	83	36.062	ENSPTRG00000001297	TDRKH	94	36.257	Pan_troglodytes
ENSEBUG00000010481	TDRKH	83	36.062	ENSPANG00000001986	TDRKH	94	36.257	Papio_anubis
ENSEBUG00000010481	TDRKH	84	36.008	ENSPSIG00000008541	TDRKH	94	36.204	Pelodiscus_sinensis
ENSEBUG00000010481	TDRKH	83	36.062	ENSPEMG00000011171	Tdrkh	87	36.257	Peromyscus_maniculatus_bairdii
ENSEBUG00000010481	TDRKH	84	36.117	ENSPCIG00000021201	TDRKH	85	36.117	Phascolarctos_cinereus
ENSEBUG00000010481	TDRKH	83	36.062	ENSPPYG00000000855	TDRKH	86	36.257	Pongo_abelii
ENSEBUG00000010481	TDRKH	83	36.686	ENSPCOG00000027505	TDRKH	86	36.884	Propithecus_coquereli
ENSEBUG00000010481	TDRKH	83	35.478	ENSPVAG00000005234	TDRKH	86	35.478	Pteropus_vampyrus
ENSEBUG00000010481	TDRKH	83	36.257	ENSRNOG00000020860	Tdrkh	87	36.452	Rattus_norvegicus
ENSEBUG00000010481	TDRKH	83	36.842	ENSRBIG00000044860	TDRKH	94	36.257	Rhinopithecus_bieti
ENSEBUG00000010481	TDRKH	83	36.842	ENSRROG00000036923	TDRKH	94	36.257	Rhinopithecus_roxellana
ENSEBUG00000010481	TDRKH	80	35.426	ENSSBOG00000034454	TDRKH	91	35.650	Saimiri_boliviensis_boliviensis
ENSEBUG00000010481	TDRKH	84	35.659	ENSSHAG00000015859	TDRKH	77	36.047	Sarcophilus_harrisii
ENSEBUG00000010481	TDRKH	71	37.788	ENSSARG00000008525	TDRKH	75	38.018	Sorex_araneus
ENSEBUG00000010481	TDRKH	84	35.977	ENSSPUG00000002369	TDRKH	92	35.977	Sphenodon_punctatus
ENSEBUG00000010481	TDRKH	83	37.475	ENSSSCG00000027770	TDRKH	87	37.673	Sus_scrofa
ENSEBUG00000010481	TDRKH	83	37.037	ENSTBEG00000011201	TDRKH	86	37.232	Tupaia_belangeri
ENSEBUG00000010481	TDRKH	70	38.018	ENSTTRG00000003149	TDRKH	86	34.714	Tursiops_truncatus
ENSEBUG00000010481	TDRKH	88	36.096	ENSUAMG00000019589	TDRKH	93	36.280	Ursus_americanus
ENSEBUG00000010481	TDRKH	88	36.096	ENSUMAG00000001456	TDRKH	93	36.280	Ursus_maritimus
ENSEBUG00000010481	TDRKH	83	36.257	ENSVPAG00000000666	TDRKH	86	36.452	Vicugna_pacos
ENSEBUG00000010481	TDRKH	83	36.647	ENSVVUG00000013241	TDRKH	94	36.770	Vulpes_vulpes
ENSEBUG00000010481	TDRKH	83	33.333	ENSXETG00000019909	tdrkh	80	33.547	Xenopus_tropicalis