EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000010530 (Gene tree)
Gene ID: -
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 51969 bases
Position: chrFYBX02006035.1:2489390-2541358
Accession: ZDB-GENE-060929-1010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000016793	RrnaAD	PF00398.20	1.7e-35	1	1
ENSEBUP00000016810	RrnaAD	PF00398.20	1.7e-35	1	1
ENSEBUP00000016780	RrnaAD	PF00398.20	1.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017369	-	4213	-	ENSEBUP00000016793	350 (aa)	-	-
ENSEBUT00000017386	-	3758	-	ENSEBUP00000016810	350 (aa)	-	-
ENSEBUT00000017357	-	4324	-	ENSEBUP00000016780	387 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010530	tfb1m	93	53.231	ENSG00000029639	TFB1M	92	53.918	Homo_sapiens
ENSEBUG00000010530	tfb1m	92	55.108	ENSAPOG00000015493	tfb1m	88	56.051	Acanthochromis_polyacanthus
ENSEBUG00000010530	tfb1m	93	51.840	ENSAMEG00000012761	TFB1M	92	52.812	Ailuropoda_melanoleuca
ENSEBUG00000010530	tfb1m	93	55.385	ENSACIG00000014290	tfb1m	90	56.329	Amphilophus_citrinellus
ENSEBUG00000010530	tfb1m	94	53.939	ENSAOCG00000004027	tfb1m	89	54.859	Amphiprion_ocellaris
ENSEBUG00000010530	tfb1m	94	53.939	ENSAPEG00000020359	tfb1m	89	54.859	Amphiprion_percula
ENSEBUG00000010530	tfb1m	92	56.037	ENSATEG00000006826	tfb1m	89	57.006	Anabas_testudineus
ENSEBUG00000010530	tfb1m	93	53.086	ENSAPLG00000006328	TFB1M	92	53.918	Anas_platyrhynchos
ENSEBUG00000010530	tfb1m	57	30.732	ENSAPLG00000009464	DIMT1	70	30.732	Anas_platyrhynchos
ENSEBUG00000010530	tfb1m	94	52.663	ENSACAG00000005244	TFB1M	94	53.846	Anolis_carolinensis
ENSEBUG00000010530	tfb1m	57	30.244	ENSACAG00000008504	DIMT1	68	30.244	Anolis_carolinensis
ENSEBUG00000010530	tfb1m	92	54.969	ENSANAG00000021469	TFB1M	92	55.486	Aotus_nancymaae
ENSEBUG00000010530	tfb1m	94	54.545	ENSACLG00000018734	tfb1m	89	55.799	Astatotilapia_calliptera
ENSEBUG00000010530	tfb1m	95	55.821	ENSAMXG00000036128	tfb1m	86	58.280	Astyanax_mexicanus
ENSEBUG00000010530	tfb1m	93	53.963	ENSBTAG00000031895	TFB1M	98	58.559	Bos_taurus
ENSEBUG00000010530	tfb1m	86	40.000	WBGene00020189	tfbm-1	83	40.000	Caenorhabditis_elegans
ENSEBUG00000010530	tfb1m	94	53.659	ENSCJAG00000012540	TFB1M	93	55.172	Callithrix_jacchus
ENSEBUG00000010530	tfb1m	93	53.067	ENSCAFG00000000581	TFB1M	93	54.062	Canis_familiaris
ENSEBUG00000010530	tfb1m	93	53.067	ENSCAFG00020015224	TFB1M	93	54.062	Canis_lupus_dingo
ENSEBUG00000010530	tfb1m	94	54.054	ENSCHIG00000017013	TFB1M	97	54.769	Capra_hircus
ENSEBUG00000010530	tfb1m	93	51.692	ENSTSYG00000012298	TFB1M	92	52.665	Carlito_syrichta
ENSEBUG00000010530	tfb1m	67	35.622	ENSCAPG00000013843	TFB1M	76	36.087	Cavia_aperea
ENSEBUG00000010530	tfb1m	92	54.037	ENSCPOG00000030422	TFB1M	92	54.545	Cavia_porcellus
ENSEBUG00000010530	tfb1m	94	53.963	ENSCCAG00000015250	TFB1M	92	55.486	Cebus_capucinus
ENSEBUG00000010530	tfb1m	75	58.889	ENSCATG00000009009	TFB1M	91	52.830	Cercocebus_atys
ENSEBUG00000010530	tfb1m	93	53.086	ENSCLAG00000004500	TFB1M	93	53.918	Chinchilla_lanigera
ENSEBUG00000010530	tfb1m	91	53.312	ENSCSAG00000013259	TFB1M	92	53.292	Chlorocebus_sabaeus
ENSEBUG00000010530	tfb1m	94	50.456	ENSCHOG00000011245	TFB1M	93	51.402	Choloepus_hoffmanni
ENSEBUG00000010530	tfb1m	51	31.319	ENSCHOG00000007922	DIMT1	52	31.319	Choloepus_hoffmanni
ENSEBUG00000010530	tfb1m	94	53.659	ENSCPBG00000016320	TFB1M	94	54.859	Chrysemys_picta_bellii
ENSEBUG00000010530	tfb1m	85	39.597	ENSCING00000003901	-	77	39.597	Ciona_intestinalis
ENSEBUG00000010530	tfb1m	93	36.111	ENSCSAVG00000004721	-	78	42.333	Ciona_savignyi
ENSEBUG00000010530	tfb1m	94	52.439	ENSCANG00000029768	TFB1M	95	53.605	Colobus_angolensis_palliatus
ENSEBUG00000010530	tfb1m	93	54.268	ENSCGRG00001022866	Tfb1m	93	54.859	Cricetulus_griseus_chok1gshd
ENSEBUG00000010530	tfb1m	90	54.859	ENSCGRG00000018084	Tfb1m	94	55.484	Cricetulus_griseus_crigri
ENSEBUG00000010530	tfb1m	95	52.367	ENSCSEG00000000131	tfb1m	90	54.545	Cynoglossus_semilaevis
ENSEBUG00000010530	tfb1m	92	54.434	ENSCVAG00000009201	tfb1m	92	54.462	Cyprinodon_variegatus
ENSEBUG00000010530	tfb1m	93	55.963	ENSDARG00000040727	tfb1m	94	60.079	Danio_rerio
ENSEBUG00000010530	tfb1m	79	42.545	ENSDNOG00000032672	-	95	42.545	Dasypus_novemcinctus
ENSEBUG00000010530	tfb1m	94	50.150	ENSDNOG00000015984	-	89	52.025	Dasypus_novemcinctus
ENSEBUG00000010530	tfb1m	93	53.231	ENSDORG00000012938	Tfb1m	93	53.750	Dipodomys_ordii
ENSEBUG00000010530	tfb1m	90	44.375	FBgn0261381	mtTFB1	95	44.375	Drosophila_melanogaster
ENSEBUG00000010530	tfb1m	95	36.145	ENSETEG00000005709	TFB1M	83	49.693	Echinops_telfairi
ENSEBUG00000010530	tfb1m	93	52.454	ENSEASG00005018887	TFB1M	92	53.438	Equus_asinus_asinus
ENSEBUG00000010530	tfb1m	93	53.374	ENSECAG00000020997	TFB1M	92	54.375	Equus_caballus
ENSEBUG00000010530	tfb1m	93	53.846	ENSEEUG00000014899	TFB1M	95	54.232	Erinaceus_europaeus
ENSEBUG00000010530	tfb1m	95	54.925	ENSELUG00000002752	tfb1m	83	56.000	Esox_lucius
ENSEBUG00000010530	tfb1m	93	51.840	ENSFCAG00000038785	TFB1M	93	52.812	Felis_catus
ENSEBUG00000010530	tfb1m	95	52.266	ENSFALG00000012500	TFB1M	92	53.292	Ficedula_albicollis
ENSEBUG00000010530	tfb1m	90	53.822	ENSFDAG00000016985	TFB1M	92	53.822	Fukomys_damarensis
ENSEBUG00000010530	tfb1m	92	54.658	ENSFHEG00000008407	tfb1m	91	54.688	Fundulus_heteroclitus
ENSEBUG00000010530	tfb1m	94	55.927	ENSGMOG00000018738	tfb1m	92	57.053	Gadus_morhua
ENSEBUG00000010530	tfb1m	92	53.271	ENSGALG00000013647	TFB1M	90	53.797	Gallus_gallus
ENSEBUG00000010530	tfb1m	92	55.046	ENSGAFG00000017997	tfb1m	92	55.077	Gambusia_affinis
ENSEBUG00000010530	tfb1m	95	53.593	ENSGACG00000006884	tfb1m	90	55.172	Gasterosteus_aculeatus
ENSEBUG00000010530	tfb1m	93	54.462	ENSGAGG00000025345	TFB1M	92	55.696	Gopherus_agassizii
ENSEBUG00000010530	tfb1m	93	53.231	ENSGGOG00000012189	TFB1M	92	53.918	Gorilla_gorilla
ENSEBUG00000010530	tfb1m	94	54.545	ENSHBUG00000019396	tfb1m	89	55.799	Haplochromis_burtoni
ENSEBUG00000010530	tfb1m	92	52.484	ENSHGLG00000002028	TFB1M	92	52.978	Heterocephalus_glaber_female
ENSEBUG00000010530	tfb1m	92	52.484	ENSHGLG00100001412	TFB1M	92	52.978	Heterocephalus_glaber_male
ENSEBUG00000010530	tfb1m	92	55.763	ENSHCOG00000014135	tfb1m	91	55.799	Hippocampus_comes
ENSEBUG00000010530	tfb1m	95	55.723	ENSIPUG00000010964	tfb1m	94	56.740	Ictalurus_punctatus
ENSEBUG00000010530	tfb1m	93	52.923	ENSSTOG00000026264	TFB1M	92	53.918	Ictidomys_tridecemlineatus
ENSEBUG00000010530	tfb1m	94	54.268	ENSJJAG00000022171	Tfb1m	90	55.486	Jaculus_jaculus
ENSEBUG00000010530	tfb1m	90	55.063	ENSKMAG00000012667	tfb1m	90	55.096	Kryptolebias_marmoratus
ENSEBUG00000010530	tfb1m	92	55.046	ENSLBEG00000011505	tfb1m	91	55.077	Labrus_bergylta
ENSEBUG00000010530	tfb1m	97	54.360	ENSLACG00000012594	TFB1M	91	56.740	Latimeria_chalumnae
ENSEBUG00000010530	tfb1m	93	53.172	ENSLOCG00000016850	tfb1m	91	54.375	Lepisosteus_oculatus
ENSEBUG00000010530	tfb1m	90	45.886	ENSLAFG00000032309	-	98	45.886	Loxodonta_africana
ENSEBUG00000010530	tfb1m	91	54.545	ENSLAFG00000014035	-	92	54.545	Loxodonta_africana
ENSEBUG00000010530	tfb1m	97	51.032	ENSMFAG00000031968	TFB1M	92	53.292	Macaca_fascicularis
ENSEBUG00000010530	tfb1m	97	51.032	ENSMMUG00000011171	TFB1M	92	53.292	Macaca_mulatta
ENSEBUG00000010530	tfb1m	97	51.032	ENSMNEG00000042278	TFB1M	92	53.292	Macaca_nemestrina
ENSEBUG00000010530	tfb1m	94	52.744	ENSMLEG00000000044	TFB1M	92	53.605	Mandrillus_leucophaeus
ENSEBUG00000010530	tfb1m	93	54.769	ENSMAMG00000009423	tfb1m	89	56.051	Mastacembelus_armatus
ENSEBUG00000010530	tfb1m	94	54.545	ENSMZEG00005005640	tfb1m	85	55.799	Maylandia_zebra
ENSEBUG00000010530	tfb1m	74	54.651	ENSMGAG00000012779	TFB1M	97	55.469	Meleagris_gallopavo
ENSEBUG00000010530	tfb1m	92	53.538	ENSMAUG00000006705	Tfb1m	92	54.114	Mesocricetus_auratus
ENSEBUG00000010530	tfb1m	93	52.923	ENSMICG00000045849	TFB1M	92	53.918	Microcebus_murinus
ENSEBUG00000010530	tfb1m	91	55.799	ENSMOCG00000013879	Tfb1m	92	55.799	Microtus_ochrogaster
ENSEBUG00000010530	tfb1m	94	54.192	ENSMMOG00000002203	tfb1m	91	55.077	Mola_mola
ENSEBUG00000010530	tfb1m	91	54.545	ENSMODG00000008169	TFB1M	93	54.545	Monodelphis_domestica
ENSEBUG00000010530	tfb1m	94	53.963	ENSMALG00000011657	tfb1m	85	54.859	Monopterus_albus
ENSEBUG00000010530	tfb1m	93	53.231	MGP_CAROLIEiJ_G0021018	Tfb1m	92	54.232	Mus_caroli
ENSEBUG00000010530	tfb1m	93	53.231	ENSMUSG00000036983	Tfb1m	92	54.232	Mus_musculus
ENSEBUG00000010530	tfb1m	91	54.232	MGP_PahariEiJ_G0023336	Tfb1m	92	54.232	Mus_pahari
ENSEBUG00000010530	tfb1m	93	53.231	MGP_SPRETEiJ_G0021923	Tfb1m	92	54.232	Mus_spretus
ENSEBUG00000010530	tfb1m	93	52.761	ENSMPUG00000002073	TFB1M	93	53.750	Mustela_putorius_furo
ENSEBUG00000010530	tfb1m	95	52.836	ENSMLUG00000011329	TFB1M	93	54.062	Myotis_lucifugus
ENSEBUG00000010530	tfb1m	92	54.658	ENSNGAG00000015154	Tfb1m	90	55.172	Nannospalax_galili
ENSEBUG00000010530	tfb1m	94	54.545	ENSNBRG00000009004	tfb1m	89	55.799	Neolamprologus_brichardi
ENSEBUG00000010530	tfb1m	93	52.923	ENSNLEG00000034352	TFB1M	92	53.605	Nomascus_leucogenys
ENSEBUG00000010530	tfb1m	94	42.553	ENSMEUG00000001699	-	91	43.887	Notamacropus_eugenii
ENSEBUG00000010530	tfb1m	93	41.667	ENSOPRG00000008921	TFB1M	94	41.693	Ochotona_princeps
ENSEBUG00000010530	tfb1m	93	53.067	ENSODEG00000005915	TFB1M	93	53.894	Octodon_degus
ENSEBUG00000010530	tfb1m	94	54.545	ENSONIG00000008109	tfb1m	92	55.799	Oreochromis_niloticus
ENSEBUG00000010530	tfb1m	93	54.630	ENSOCUG00000012154	TFB1M	93	55.172	Oryctolagus_cuniculus
ENSEBUG00000010530	tfb1m	92	55.452	ENSORLG00000017328	tfb1m	78	55.486	Oryzias_latipes
ENSEBUG00000010530	tfb1m	92	55.763	ENSORLG00020002250	tfb1m	93	55.799	Oryzias_latipes_hni
ENSEBUG00000010530	tfb1m	92	55.763	ENSORLG00015016067	tfb1m	93	55.799	Oryzias_latipes_hsok
ENSEBUG00000010530	tfb1m	92	55.140	ENSOMEG00000015641	tfb1m	91	55.172	Oryzias_melastigma
ENSEBUG00000010530	tfb1m	94	50.904	ENSOGAG00000011681	TFB1M	93	52.188	Otolemur_garnettii
ENSEBUG00000010530	tfb1m	94	53.392	ENSOARG00000004216	TFB1M	97	54.079	Ovis_aries
ENSEBUG00000010530	tfb1m	93	53.231	ENSPPAG00000030834	TFB1M	92	53.918	Pan_paniscus
ENSEBUG00000010530	tfb1m	93	51.840	ENSPPRG00000013578	TFB1M	93	52.812	Panthera_pardus
ENSEBUG00000010530	tfb1m	93	51.840	ENSPTIG00000003540	TFB1M	93	52.812	Panthera_tigris_altaica
ENSEBUG00000010530	tfb1m	93	52.923	ENSPTRG00000018730	TFB1M	92	53.605	Pan_troglodytes
ENSEBUG00000010530	tfb1m	97	51.622	ENSPANG00000007489	TFB1M	92	53.918	Papio_anubis
ENSEBUG00000010530	tfb1m	92	57.632	ENSPKIG00000021117	tfb1m	91	57.367	Paramormyrops_kingsleyae
ENSEBUG00000010530	tfb1m	95	52.252	ENSPSIG00000006643	TFB1M	93	54.114	Pelodiscus_sinensis
ENSEBUG00000010530	tfb1m	98	51.462	ENSPMGG00000011289	tfb1m	92	53.605	Periophthalmus_magnuspinnatus
ENSEBUG00000010530	tfb1m	92	54.658	ENSPEMG00000010410	Tfb1m	92	54.859	Peromyscus_maniculatus_bairdii
ENSEBUG00000010530	tfb1m	56	56.853	ENSPMAG00000008056	tfb1m	87	56.923	Petromyzon_marinus
ENSEBUG00000010530	tfb1m	93	52.160	ENSPCIG00000001010	TFB1M	89	52.665	Phascolarctos_cinereus
ENSEBUG00000010530	tfb1m	92	55.623	ENSPFOG00000005139	tfb1m	92	55.657	Poecilia_formosa
ENSEBUG00000010530	tfb1m	92	55.657	ENSPLAG00000021410	tfb1m	92	55.692	Poecilia_latipinna
ENSEBUG00000010530	tfb1m	92	55.657	ENSPMEG00000020166	tfb1m	92	55.692	Poecilia_mexicana
ENSEBUG00000010530	tfb1m	92	55.352	ENSPREG00000022392	tfb1m	92	55.385	Poecilia_reticulata
ENSEBUG00000010530	tfb1m	93	51.534	ENSPPYG00000017123	TFB1M	93	52.500	Pongo_abelii
ENSEBUG00000010530	tfb1m	83	44.983	ENSPCAG00000007078	TFB1M	93	46.071	Procavia_capensis
ENSEBUG00000010530	tfb1m	93	52.308	ENSPCOG00000028453	TFB1M	92	53.292	Propithecus_coquereli
ENSEBUG00000010530	tfb1m	93	52.761	ENSPVAG00000015818	TFB1M	93	53.750	Pteropus_vampyrus
ENSEBUG00000010530	tfb1m	95	54.762	ENSPNYG00000007330	tfb1m	90	56.000	Pundamilia_nyererei
ENSEBUG00000010530	tfb1m	95	55.422	ENSPNAG00000007507	tfb1m	90	56.426	Pygocentrus_nattereri
ENSEBUG00000010530	tfb1m	93	52.778	ENSRNOG00000056223	Tfb1m	92	53.605	Rattus_norvegicus
ENSEBUG00000010530	tfb1m	94	52.439	ENSRBIG00000039975	TFB1M	95	53.605	Rhinopithecus_bieti
ENSEBUG00000010530	tfb1m	94	52.134	ENSRROG00000033802	TFB1M	95	53.292	Rhinopithecus_roxellana
ENSEBUG00000010530	tfb1m	94	53.659	ENSSBOG00000008663	TFB1M	92	55.172	Saimiri_boliviensis_boliviensis
ENSEBUG00000010530	tfb1m	80	52.313	ENSSHAG00000013259	TFB1M	82	52.313	Sarcophilus_harrisii
ENSEBUG00000010530	tfb1m	92	57.764	ENSSFOG00015009739	tfb1m	91	57.680	Scleropages_formosus
ENSEBUG00000010530	tfb1m	92	55.108	ENSSMAG00000008229	tfb1m	89	55.732	Scophthalmus_maximus
ENSEBUG00000010530	tfb1m	94	53.659	ENSSDUG00000011871	tfb1m	89	54.545	Seriola_dumerili
ENSEBUG00000010530	tfb1m	92	54.517	ENSSLDG00000023923	tfb1m	89	54.545	Seriola_lalandi_dorsalis
ENSEBUG00000010530	tfb1m	62	57.407	ENSSARG00000003159	TFB1M	97	57.407	Sorex_araneus
ENSEBUG00000010530	tfb1m	94	51.524	ENSSPUG00000015253	TFB1M	92	52.351	Sphenodon_punctatus
ENSEBUG00000010530	tfb1m	94	53.659	ENSSPAG00000019515	tfb1m	89	54.545	Stegastes_partitus
ENSEBUG00000010530	tfb1m	95	53.571	ENSSSCG00000024361	TFB1M	96	54.154	Sus_scrofa
ENSEBUG00000010530	tfb1m	94	52.888	ENSTGUG00000011136	TFB1M	92	53.918	Taeniopygia_guttata
ENSEBUG00000010530	tfb1m	92	56.037	ENSTRUG00000020334	tfb1m	88	57.006	Takifugu_rubripes
ENSEBUG00000010530	tfb1m	59	60.096	ENSTNIG00000016882	tfb1m	92	60.096	Tetraodon_nigroviridis
ENSEBUG00000010530	tfb1m	93	52.308	ENSTBEG00000008769	TFB1M	92	53.292	Tupaia_belangeri
ENSEBUG00000010530	tfb1m	93	53.659	ENSTTRG00000006327	TFB1M	96	54.154	Tursiops_truncatus
ENSEBUG00000010530	tfb1m	91	52.500	ENSUAMG00000017802	TFB1M	91	52.500	Ursus_americanus
ENSEBUG00000010530	tfb1m	93	51.840	ENSUMAG00000013377	TFB1M	84	52.500	Ursus_maritimus
ENSEBUG00000010530	tfb1m	95	52.711	ENSVPAG00000010148	TFB1M	94	54.062	Vicugna_pacos
ENSEBUG00000010530	tfb1m	93	52.454	ENSVVUG00000007643	TFB1M	94	53.438	Vulpes_vulpes
ENSEBUG00000010530	tfb1m	92	54.348	ENSXETG00000007852	tfb1m	92	54.375	Xenopus_tropicalis
ENSEBUG00000010530	tfb1m	92	55.046	ENSXCOG00000013230	tfb1m	92	55.077	Xiphophorus_couchianus
ENSEBUG00000010530	tfb1m	92	55.046	ENSXMAG00000019222	tfb1m	92	55.077	Xiphophorus_maculatus