EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000010654 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 66933 bases
Position: chrFYBX02009823.1:1328785-1395717
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000017045	Btz	PF09405.10	6.2e-19	1	1
ENSEBUP00000017019	Btz	PF09405.10	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017621	-	4149	-	ENSEBUP00000017045	720 (aa)	-	-
ENSEBUT00000017595	-	5212	-	ENSEBUP00000017019	741 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010654	casc3	82	42.806	ENSG00000108349	CASC3	99	36.627	Homo_sapiens
ENSEBUG00000010654	casc3	55	47.887	ENSAPOG00000008467	casc3	77	38.585	Acanthochromis_polyacanthus
ENSEBUG00000010654	casc3	98	37.284	ENSAMEG00000007764	CASC3	99	37.120	Ailuropoda_melanoleuca
ENSEBUG00000010654	casc3	82	34.510	ENSACIG00000000720	casc3	79	33.164	Amphilophus_citrinellus
ENSEBUG00000010654	casc3	64	37.545	ENSAOCG00000016676	casc3	80	38.889	Amphiprion_ocellaris
ENSEBUG00000010654	casc3	64	37.805	ENSAPEG00000006787	casc3	80	39.073	Amphiprion_percula
ENSEBUG00000010654	casc3	77	38.793	ENSATEG00000017196	casc3	78	39.590	Anabas_testudineus
ENSEBUG00000010654	casc3	90	35.942	ENSACAG00000002674	CASC3	87	36.705	Anolis_carolinensis
ENSEBUG00000010654	casc3	89	35.241	ENSANAG00000034820	-	97	35.448	Aotus_nancymaae
ENSEBUG00000010654	casc3	62	45.455	ENSANAG00000031954	-	95	44.749	Aotus_nancymaae
ENSEBUG00000010654	casc3	76	37.607	ENSACLG00000016198	casc3	81	35.647	Astatotilapia_calliptera
ENSEBUG00000010654	casc3	77	38.115	ENSAMXG00000032452	casc3	75	41.727	Astyanax_mexicanus
ENSEBUG00000010654	casc3	98	37.401	ENSBTAG00000006250	CASC3	99	37.533	Bos_taurus
ENSEBUG00000010654	casc3	98	35.827	ENSCJAG00000016032	CASC3	99	36.281	Callithrix_jacchus
ENSEBUG00000010654	casc3	98	36.472	ENSCAFG00000016141	CASC3	99	37.237	Canis_familiaris
ENSEBUG00000010654	casc3	98	35.884	ENSCAFG00020018882	CASC3	99	36.662	Canis_lupus_dingo
ENSEBUG00000010654	casc3	98	37.683	ENSCHIG00000006338	CASC3	99	37.600	Capra_hircus
ENSEBUG00000010654	casc3	89	36.364	ENSTSYG00000002975	CASC3	88	38.314	Carlito_syrichta
ENSEBUG00000010654	casc3	88	37.087	ENSCAPG00000010514	CASC3	99	38.045	Cavia_aperea
ENSEBUG00000010654	casc3	98	36.400	ENSCPOG00000015139	CASC3	99	37.849	Cavia_porcellus
ENSEBUG00000010654	casc3	98	36.436	ENSCCAG00000033620	CASC3	99	37.154	Cebus_capucinus
ENSEBUG00000010654	casc3	98	36.786	ENSCATG00000033593	CASC3	90	38.109	Cercocebus_atys
ENSEBUG00000010654	casc3	98	36.849	ENSCLAG00000013730	CASC3	99	37.566	Chinchilla_lanigera
ENSEBUG00000010654	casc3	98	36.786	ENSCSAG00000002777	CASC3	99	37.746	Chlorocebus_sabaeus
ENSEBUG00000010654	casc3	98	35.799	ENSCPBG00000004750	CASC3	98	37.008	Chrysemys_picta_bellii
ENSEBUG00000010654	casc3	98	37.185	ENSCANG00000008814	CASC3	99	37.188	Colobus_angolensis_palliatus
ENSEBUG00000010654	casc3	98	35.799	ENSCGRG00001014706	Casc3	99	36.424	Cricetulus_griseus_chok1gshd
ENSEBUG00000010654	casc3	98	35.724	ENSCGRG00000001952	Casc3	99	36.401	Cricetulus_griseus_crigri
ENSEBUG00000010654	casc3	54	48.872	ENSCSEG00000010047	casc3	52	40.654	Cynoglossus_semilaevis
ENSEBUG00000010654	casc3	70	49.664	ENSCVAG00000014935	casc3	88	36.335	Cyprinodon_variegatus
ENSEBUG00000010654	casc3	71	37.770	ENSDARG00000029911	casc3	75	41.071	Danio_rerio
ENSEBUG00000010654	casc3	98	36.702	ENSDNOG00000017249	CASC3	95	36.939	Dasypus_novemcinctus
ENSEBUG00000010654	casc3	83	40.636	ENSETEG00000013720	CASC3	99	36.388	Echinops_telfairi
ENSEBUG00000010654	casc3	98	36.508	ENSEASG00005002909	CASC3	97	42.321	Equus_asinus_asinus
ENSEBUG00000010654	casc3	100	34.960	ENSECAG00000019947	CASC3	84	36.170	Equus_caballus
ENSEBUG00000010654	casc3	65	33.929	ENSEEUG00000014253	CASC3	93	35.478	Erinaceus_europaeus
ENSEBUG00000010654	casc3	72	42.077	ENSELUG00000015093	casc3	78	36.290	Esox_lucius
ENSEBUG00000010654	casc3	98	36.436	ENSFCAG00000014998	CASC3	99	36.891	Felis_catus
ENSEBUG00000010654	casc3	91	36.769	ENSFALG00000000412	CASC3	100	36.161	Ficedula_albicollis
ENSEBUG00000010654	casc3	89	37.037	ENSFDAG00000020696	CASC3	94	37.426	Fukomys_damarensis
ENSEBUG00000010654	casc3	81	36.759	ENSFHEG00000015793	casc3	87	39.297	Fundulus_heteroclitus
ENSEBUG00000010654	casc3	100	36.352	ENSGALG00000031813	CASC3	100	36.611	Gallus_gallus
ENSEBUG00000010654	casc3	68	38.909	ENSGAFG00000017148	casc3	69	39.628	Gambusia_affinis
ENSEBUG00000010654	casc3	82	36.523	ENSGAGG00000008432	CASC3	82	48.958	Gopherus_agassizii
ENSEBUG00000010654	casc3	98	35.771	ENSGGOG00000005067	CASC3	99	36.627	Gorilla_gorilla
ENSEBUG00000010654	casc3	76	38.983	ENSHBUG00000013155	casc3	81	36.677	Haplochromis_burtoni
ENSEBUG00000010654	casc3	88	36.898	ENSHGLG00000012117	CASC3	99	36.905	Heterocephalus_glaber_female
ENSEBUG00000010654	casc3	89	37.147	ENSHGLG00100002268	CASC3	99	37.982	Heterocephalus_glaber_male
ENSEBUG00000010654	casc3	63	42.466	ENSHCOG00000002664	casc3	71	41.429	Hippocampus_comes
ENSEBUG00000010654	casc3	84	38.710	ENSIPUG00000002679	casc3	81	38.754	Ictalurus_punctatus
ENSEBUG00000010654	casc3	82	38.389	ENSSTOG00000006374	CASC3	88	38.630	Ictidomys_tridecemlineatus
ENSEBUG00000010654	casc3	98	36.999	ENSJJAG00000023525	Casc3	89	38.968	Jaculus_jaculus
ENSEBUG00000010654	casc3	57	45.562	ENSKMAG00000019507	casc3	71	38.057	Kryptolebias_marmoratus
ENSEBUG00000010654	casc3	88	33.819	ENSLACG00000013200	CASC3	87	34.298	Latimeria_chalumnae
ENSEBUG00000010654	casc3	50	55.333	ENSLOCG00000013518	casc3	60	47.429	Lepisosteus_oculatus
ENSEBUG00000010654	casc3	98	36.376	ENSLAFG00000000606	CASC3	99	37.549	Loxodonta_africana
ENSEBUG00000010654	casc3	98	36.786	ENSMFAG00000041496	CASC3	90	38.109	Macaca_fascicularis
ENSEBUG00000010654	casc3	98	36.786	ENSMMUG00000045187	CASC3	90	38.109	Macaca_mulatta
ENSEBUG00000010654	casc3	89	37.240	ENSMLEG00000029049	CASC3	97	38.824	Mandrillus_leucophaeus
ENSEBUG00000010654	casc3	59	41.429	ENSMAMG00000005235	casc3	66	37.778	Mastacembelus_armatus
ENSEBUG00000010654	casc3	76	37.607	ENSMZEG00005003815	casc3	81	35.647	Maylandia_zebra
ENSEBUG00000010654	casc3	82	36.916	ENSMGAG00000013247	CASC3	99	38.109	Meleagris_gallopavo
ENSEBUG00000010654	casc3	73	35.531	ENSMAUG00000006023	Casc3	79	35.478	Mesocricetus_auratus
ENSEBUG00000010654	casc3	98	35.952	ENSMICG00000003321	CASC3	90	38.205	Microcebus_murinus
ENSEBUG00000010654	casc3	98	36.137	ENSMOCG00000013644	Casc3	88	37.775	Microtus_ochrogaster
ENSEBUG00000010654	casc3	62	55.769	ENSMMOG00000014339	casc3	80	37.370	Mola_mola
ENSEBUG00000010654	casc3	88	35.075	ENSMODG00000013044	CASC3	91	36.508	Monodelphis_domestica
ENSEBUG00000010654	casc3	88	36.103	MGP_CAROLIEiJ_G0017099	Casc3	88	37.004	Mus_caroli
ENSEBUG00000010654	casc3	88	36.405	ENSMUSG00000078676	Casc3	88	37.445	Mus_musculus
ENSEBUG00000010654	casc3	88	36.254	MGP_SPRETEiJ_G0017943	Casc3	88	37.298	Mus_spretus
ENSEBUG00000010654	casc3	98	37.216	ENSMPUG00000014903	CASC3	99	37.500	Mustela_putorius_furo
ENSEBUG00000010654	casc3	98	36.085	ENSMLUG00000010520	CASC3	99	37.565	Myotis_lucifugus
ENSEBUG00000010654	casc3	98	34.914	ENSNGAG00000023121	Casc3	88	37.518	Nannospalax_galili
ENSEBUG00000010654	casc3	98	35.600	ENSNLEG00000001598	CASC3	99	36.495	Nomascus_leucogenys
ENSEBUG00000010654	casc3	68	42.969	ENSMEUG00000015662	CASC3	95	32.794	Notamacropus_eugenii
ENSEBUG00000010654	casc3	54	35.181	ENSOPRG00000007240	-	70	35.785	Ochotona_princeps
ENSEBUG00000010654	casc3	98	36.460	ENSODEG00000017858	CASC3	99	36.053	Octodon_degus
ENSEBUG00000010654	casc3	76	38.655	ENSONIG00000009337	casc3	99	33.201	Oreochromis_niloticus
ENSEBUG00000010654	casc3	98	36.352	ENSOCUG00000002954	CASC3	99	37.252	Oryctolagus_cuniculus
ENSEBUG00000010654	casc3	67	38.235	ENSORLG00000023125	casc3	99	31.605	Oryzias_latipes
ENSEBUG00000010654	casc3	100	35.891	ENSOGAG00000034486	CASC3	100	37.113	Otolemur_garnettii
ENSEBUG00000010654	casc3	98	37.616	ENSOARG00000013239	CASC3	99	37.716	Ovis_aries
ENSEBUG00000010654	casc3	82	42.806	ENSPPAG00000035069	CASC3	99	36.495	Pan_paniscus
ENSEBUG00000010654	casc3	98	36.436	ENSPPRG00000023670	CASC3	99	36.891	Panthera_pardus
ENSEBUG00000010654	casc3	88	37.237	ENSPTIG00000010891	CASC3	88	38.235	Panthera_tigris_altaica
ENSEBUG00000010654	casc3	98	36.786	ENSPANG00000021708	CASC3	99	36.925	Papio_anubis
ENSEBUG00000010654	casc3	78	38.914	ENSPKIG00000023186	casc3	77	41.404	Paramormyrops_kingsleyae
ENSEBUG00000010654	casc3	98	34.881	ENSPEMG00000009774	Casc3	99	35.942	Peromyscus_maniculatus_bairdii
ENSEBUG00000010654	casc3	81	41.767	ENSPFOG00000017632	casc3	99	33.509	Poecilia_formosa
ENSEBUG00000010654	casc3	68	37.993	ENSPLAG00000005268	casc3	68	39.091	Poecilia_latipinna
ENSEBUG00000010654	casc3	54	53.906	ENSPREG00000011856	casc3	99	31.414	Poecilia_reticulata
ENSEBUG00000010654	casc3	98	36.267	ENSPPYG00000008467	CASC3	99	36.579	Pongo_abelii
ENSEBUG00000010654	casc3	82	37.002	ENSPCOG00000008183	CASC3	90	38.473	Propithecus_coquereli
ENSEBUG00000010654	casc3	98	35.428	ENSPVAG00000008556	CASC3	99	37.037	Pteropus_vampyrus
ENSEBUG00000010654	casc3	76	38.983	ENSPNYG00000011962	casc3	81	36.677	Pundamilia_nyererei
ENSEBUG00000010654	casc3	74	41.256	ENSPNAG00000015928	casc3	75	41.197	Pygocentrus_nattereri
ENSEBUG00000010654	casc3	74	45.989	ENSRNOG00000009716	Casc3	88	37.298	Rattus_norvegicus
ENSEBUG00000010654	casc3	98	36.786	ENSRBIG00000033289	CASC3	99	37.335	Rhinopithecus_bieti
ENSEBUG00000010654	casc3	98	36.786	ENSRROG00000022337	CASC3	99	37.335	Rhinopithecus_roxellana
ENSEBUG00000010654	casc3	88	37.369	ENSSBOG00000031406	CASC3	96	37.931	Saimiri_boliviensis_boliviensis
ENSEBUG00000010654	casc3	89	36.404	ENSSHAG00000013338	CASC3	99	38.338	Sarcophilus_harrisii
ENSEBUG00000010654	casc3	76	42.788	ENSSFOG00015002645	casc3	78	41.528	Scleropages_formosus
ENSEBUG00000010654	casc3	56	45.000	ENSSMAG00000016096	casc3	74	34.444	Scophthalmus_maximus
ENSEBUG00000010654	casc3	61	38.060	ENSSDUG00000016893	casc3	72	38.112	Seriola_dumerili
ENSEBUG00000010654	casc3	51	53.704	ENSSLDG00000020308	casc3	99	31.148	Seriola_lalandi_dorsalis
ENSEBUG00000010654	casc3	56	48.718	ENSSARG00000010378	CASC3	73	45.631	Sorex_araneus
ENSEBUG00000010654	casc3	64	38.866	ENSSPAG00000023008	casc3	77	39.228	Stegastes_partitus
ENSEBUG00000010654	casc3	93	35.484	ENSSSCG00000017477	CASC3	97	38.018	Sus_scrofa
ENSEBUG00000010654	casc3	76	36.426	ENSTGUG00000002300	CASC3	99	35.135	Taeniopygia_guttata
ENSEBUG00000010654	casc3	76	39.344	ENSTRUG00000000673	casc3	75	39.236	Takifugu_rubripes
ENSEBUG00000010654	casc3	73	43.069	ENSTNIG00000003208	casc3	99	33.632	Tetraodon_nigroviridis
ENSEBUG00000010654	casc3	61	44.309	ENSTBEG00000017459	CASC3	63	45.205	Tupaia_belangeri
ENSEBUG00000010654	casc3	59	44.554	ENSTTRG00000016896	CASC3	68	45.000	Tursiops_truncatus
ENSEBUG00000010654	casc3	98	36.111	ENSUAMG00000015116	CASC3	99	36.925	Ursus_americanus
ENSEBUG00000010654	casc3	89	37.109	ENSUMAG00000017697	CASC3	87	51.678	Ursus_maritimus
ENSEBUG00000010654	casc3	98	36.605	ENSVVUG00000000997	CASC3	99	37.368	Vulpes_vulpes
ENSEBUG00000010654	casc3	70	47.590	ENSXMAG00000013937	casc3	79	38.994	Xiphophorus_maculatus