EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000010838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 7970 bases
Position: chrFYBX02009838.1:726323-734292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000017374	ResIII	PF04851.15	4.2e-05	1	1
ENSEBUP00000017374	DEAD	PF00270.29	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000017950	-	1278	-	ENSEBUP00000017374	425 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000010838	-	92	31.605	ENSEBUG00000007713	ddx59	51	41.667
ENSEBUG00000010838	-	58	41.176	ENSEBUG00000006265	ddx18	53	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010838	-	91	43.073	ENSG00000278053	DDX52	64	41.791	Homo_sapiens
ENSEBUG00000010838	-	91	43.073	ENSAMEG00000013159	DDX52	63	42.532	Ailuropoda_melanoleuca
ENSEBUG00000010838	-	92	41.045	ENSACIG00000002843	ddx52	69	40.547	Amphilophus_citrinellus
ENSEBUG00000010838	-	91	42.569	ENSACAG00000006395	DDX52	73	42.065	Anolis_carolinensis
ENSEBUG00000010838	-	91	43.325	ENSANAG00000028587	DDX52	64	42.040	Aotus_nancymaae
ENSEBUG00000010838	-	91	43.325	ENSBTAG00000010313	DDX52	64	42.250	Bos_taurus
ENSEBUG00000010838	-	94	34.783	WBGene00011032	R05D11.4	68	33.875	Caenorhabditis_elegans
ENSEBUG00000010838	-	91	43.325	ENSCJAG00000015190	DDX52	64	42.250	Callithrix_jacchus
ENSEBUG00000010838	-	91	42.821	ENSCAFG00000013554	-	64	41.750	Canis_familiaris
ENSEBUG00000010838	-	91	43.073	ENSCAFG00000018145	-	64	42.000	Canis_familiaris
ENSEBUG00000010838	-	91	43.073	ENSCAFG00020003753	DDX52	64	42.278	Canis_lupus_dingo
ENSEBUG00000010838	-	91	43.577	ENSCHIG00000006275	DDX52	65	42.785	Capra_hircus
ENSEBUG00000010838	-	91	42.821	ENSTSYG00000002996	DDX52	64	41.750	Carlito_syrichta
ENSEBUG00000010838	-	91	42.821	ENSCPOG00000001232	DDX52	65	41.542	Cavia_porcellus
ENSEBUG00000010838	-	91	42.821	ENSCCAG00000023213	DDX52	64	40.247	Cebus_capucinus
ENSEBUG00000010838	-	91	43.325	ENSCATG00000041437	DDX52	64	42.250	Cercocebus_atys
ENSEBUG00000010838	-	91	43.073	ENSCLAG00000016292	DDX52	64	42.040	Chinchilla_lanigera
ENSEBUG00000010838	-	91	43.325	ENSCSAG00000006122	DDX52	63	42.532	Chlorocebus_sabaeus
ENSEBUG00000010838	-	91	43.333	ENSCPBG00000009806	DDX52	61	41.837	Chrysemys_picta_bellii
ENSEBUG00000010838	-	92	37.838	ENSCING00000016218	-	85	37.192	Ciona_intestinalis
ENSEBUG00000010838	-	81	38.859	ENSCSAVG00000003835	-	84	39.943	Ciona_savignyi
ENSEBUG00000010838	-	91	43.325	ENSCANG00000035140	DDX52	63	42.532	Colobus_angolensis_palliatus
ENSEBUG00000010838	-	91	43.325	ENSCGRG00001020695	Ddx52	64	42.040	Cricetulus_griseus_chok1gshd
ENSEBUG00000010838	-	91	43.325	ENSCGRG00000008830	Ddx52	64	42.040	Cricetulus_griseus_crigri
ENSEBUG00000010838	-	92	42.184	ENSCSEG00000010008	ddx52	57	41.687	Cynoglossus_semilaevis
ENSEBUG00000010838	-	92	41.935	ENSCVAG00000005302	ddx52	65	41.439	Cyprinodon_variegatus
ENSEBUG00000010838	-	92	43.035	ENSDNOG00000047454	DDX52	64	42.250	Dasypus_novemcinctus
ENSEBUG00000010838	-	91	43.325	ENSDORG00000004276	Ddx52	64	42.750	Dipodomys_ordii
ENSEBUG00000010838	-	92	41.667	FBgn0036754	CG5589	53	49.761	Drosophila_melanogaster
ENSEBUG00000010838	-	91	40.302	ENSETEG00000016042	DDX52	51	51.220	Echinops_telfairi
ENSEBUG00000010838	-	91	43.325	ENSEASG00005011275	DDX52	60	42.040	Equus_asinus_asinus
ENSEBUG00000010838	-	91	43.325	ENSECAG00000012286	DDX52	64	42.250	Equus_caballus
ENSEBUG00000010838	-	92	41.791	ENSELUG00000018002	ddx52	55	49.268	Esox_lucius
ENSEBUG00000010838	-	91	43.073	ENSFCAG00000010573	DDX52	64	42.000	Felis_catus
ENSEBUG00000010838	-	91	42.821	ENSFALG00000005155	DDX52	62	41.814	Ficedula_albicollis
ENSEBUG00000010838	-	91	37.626	ENSFDAG00000011133	-	62	37.056	Fukomys_damarensis
ENSEBUG00000010838	-	91	43.073	ENSFDAG00000008340	-	64	42.000	Fukomys_damarensis
ENSEBUG00000010838	-	92	41.935	ENSFHEG00000017239	ddx52	59	41.439	Fundulus_heteroclitus
ENSEBUG00000010838	-	91	40.806	ENSGMOG00000014879	ddx52	68	40.302	Gadus_morhua
ENSEBUG00000010838	-	92	41.687	ENSGAFG00000000702	ddx52	60	41.191	Gambusia_affinis
ENSEBUG00000010838	-	92	41.294	ENSGACG00000020624	ddx52	80	40.554	Gasterosteus_aculeatus
ENSEBUG00000010838	-	91	41.814	ENSGAGG00000007234	DDX52	59	41.013	Gopherus_agassizii
ENSEBUG00000010838	-	91	43.325	ENSGGOG00000028224	DDX52	64	42.040	Gorilla_gorilla
ENSEBUG00000010838	-	91	42.821	ENSHGLG00000006235	-	65	41.542	Heterocephalus_glaber_female
ENSEBUG00000010838	-	91	34.615	ENSHGLG00000019205	-	57	43.243	Heterocephalus_glaber_female
ENSEBUG00000010838	-	91	42.821	ENSHGLG00100013765	-	71	41.814	Heterocephalus_glaber_male
ENSEBUG00000010838	-	91	34.615	ENSHGLG00100018699	-	58	43.243	Heterocephalus_glaber_male
ENSEBUG00000010838	-	91	41.562	ENSHCOG00000007966	ddx52	70	41.045	Hippocampus_comes
ENSEBUG00000010838	-	62	37.184	ENSSTOG00000002550	DDX52	80	36.101	Ictidomys_tridecemlineatus
ENSEBUG00000010838	-	91	43.577	ENSJJAG00000021877	Ddx52	64	42.289	Jaculus_jaculus
ENSEBUG00000010838	-	92	41.791	ENSKMAG00000022270	ddx52	82	41.761	Kryptolebias_marmoratus
ENSEBUG00000010838	-	91	42.965	ENSLACG00000012514	DDX52	63	41.687	Latimeria_chalumnae
ENSEBUG00000010838	-	89	41.388	ENSLAFG00000002635	DDX52	84	43.023	Loxodonta_africana
ENSEBUG00000010838	-	91	43.325	ENSMFAG00000000640	DDX52	64	42.250	Macaca_fascicularis
ENSEBUG00000010838	-	91	43.325	ENSMMUG00000002980	DDX52	64	42.250	Macaca_mulatta
ENSEBUG00000010838	-	91	43.577	ENSMNEG00000043658	DDX52	66	42.750	Macaca_nemestrina
ENSEBUG00000010838	-	91	43.325	ENSMLEG00000017518	DDX52	63	42.532	Mandrillus_leucophaeus
ENSEBUG00000010838	-	91	43.325	ENSMAUG00000021084	Ddx52	64	42.532	Mesocricetus_auratus
ENSEBUG00000010838	-	91	38.791	ENSMICG00000004290	-	64	37.562	Microcebus_murinus
ENSEBUG00000010838	-	91	43.577	ENSMOCG00000009654	Ddx52	64	42.289	Microtus_ochrogaster
ENSEBUG00000010838	-	91	42.065	ENSMMOG00000018825	ddx52	63	41.542	Mola_mola
ENSEBUG00000010838	-	91	42.569	ENSMODG00000002493	DDX52	63	41.500	Monodelphis_domestica
ENSEBUG00000010838	-	91	41.562	ENSMALG00000007621	ddx52	65	39.303	Monopterus_albus
ENSEBUG00000010838	-	91	43.829	MGP_CAROLIEiJ_G0016888	Ddx52	64	42.537	Mus_caroli
ENSEBUG00000010838	-	91	43.577	ENSMUSG00000020677	Ddx52	64	42.289	Mus_musculus
ENSEBUG00000010838	-	91	43.577	MGP_PahariEiJ_G0018018	Ddx52	64	42.289	Mus_pahari
ENSEBUG00000010838	-	91	43.577	MGP_SPRETEiJ_G0017733	Ddx52	64	42.289	Mus_spretus
ENSEBUG00000010838	-	91	43.325	ENSMPUG00000015007	DDX52	64	42.250	Mustela_putorius_furo
ENSEBUG00000010838	-	91	41.960	ENSMLUG00000007167	-	64	41.895	Myotis_lucifugus
ENSEBUG00000010838	-	91	42.065	ENSMLUG00000024480	-	77	42.065	Myotis_lucifugus
ENSEBUG00000010838	-	92	42.786	ENSNGAG00000020686	Ddx52	65	41.791	Nannospalax_galili
ENSEBUG00000010838	-	91	41.310	ENSNBRG00000007750	ddx52	68	41.310	Neolamprologus_brichardi
ENSEBUG00000010838	-	91	43.325	ENSNLEG00000002826	DDX52	64	42.040	Nomascus_leucogenys
ENSEBUG00000010838	-	78	44.477	ENSMEUG00000011234	DDX52	82	43.314	Notamacropus_eugenii
ENSEBUG00000010838	-	91	34.750	ENSOPRG00000003899	DDX52	65	34.568	Ochotona_princeps
ENSEBUG00000010838	-	90	42.893	ENSODEG00000002857	-	70	41.604	Octodon_degus
ENSEBUG00000010838	-	91	42.338	ENSODEG00000012814	-	65	41.117	Octodon_degus
ENSEBUG00000010838	-	91	41.058	ENSONIG00000004869	ddx52	61	41.058	Oreochromis_niloticus
ENSEBUG00000010838	-	91	43.392	ENSOANG00000007133	DDX52	69	39.200	Ornithorhynchus_anatinus
ENSEBUG00000010838	-	92	43.317	ENSOCUG00000014532	DDX52	64	42.327	Oryctolagus_cuniculus
ENSEBUG00000010838	-	92	41.542	ENSORLG00000005241	ddx52	60	41.045	Oryzias_latipes
ENSEBUG00000010838	-	91	40.050	ENSOGAG00000000868	DDX52	65	39.000	Otolemur_garnettii
ENSEBUG00000010838	-	91	43.577	ENSOARG00000002998	DDX52	64	42.500	Ovis_aries
ENSEBUG00000010838	-	91	43.577	ENSPPAG00000028453	DDX52	65	42.289	Pan_paniscus
ENSEBUG00000010838	-	91	43.325	ENSPPRG00000009742	DDX52	65	42.250	Panthera_pardus
ENSEBUG00000010838	-	91	42.821	ENSPTIG00000013697	DDX52	65	41.750	Panthera_tigris_altaica
ENSEBUG00000010838	-	91	43.577	ENSPTRG00000009058	DDX52	64	42.289	Pan_troglodytes
ENSEBUG00000010838	-	91	42.821	ENSPANG00000022101	DDX52	63	42.025	Papio_anubis
ENSEBUG00000010838	-	91	42.211	ENSPKIG00000013058	ddx52	65	39.043	Paramormyrops_kingsleyae
ENSEBUG00000010838	-	91	42.065	ENSPSIG00000010226	DDX52	63	41.266	Pelodiscus_sinensis
ENSEBUG00000010838	-	91	42.677	ENSPMGG00000005458	ddx52	77	42.172	Periophthalmus_magnuspinnatus
ENSEBUG00000010838	-	91	43.577	ENSPEMG00000003263	Ddx52	64	42.289	Peromyscus_maniculatus_bairdii
ENSEBUG00000010838	-	91	43.073	ENSPCIG00000017730	DDX52	57	42.065	Phascolarctos_cinereus
ENSEBUG00000010838	-	92	41.935	ENSPLAG00000008368	ddx52	59	41.439	Poecilia_latipinna
ENSEBUG00000010838	-	91	43.325	ENSPPYG00000008221	DDX52	64	42.040	Pongo_abelii
ENSEBUG00000010838	-	84	44.414	ENSPCAG00000005814	DDX52	59	43.597	Procavia_capensis
ENSEBUG00000010838	-	91	44.332	ENSPVAG00000010462	DDX52	63	43.325	Pteropus_vampyrus
ENSEBUG00000010838	-	91	41.058	ENSPNYG00000020730	ddx52	68	40.302	Pundamilia_nyererei
ENSEBUG00000010838	-	91	43.829	ENSRNOG00000002612	Ddx52	64	42.537	Rattus_norvegicus
ENSEBUG00000010838	-	91	38.677	ENSRBIG00000032462	DDX52	63	38.060	Rhinopithecus_bieti
ENSEBUG00000010838	-	91	37.310	ENSRROG00000034760	DDX52	60	36.856	Rhinopithecus_roxellana
ENSEBUG00000010838	-	73	42.079	YGL171W	-	54	42.079	Saccharomyces_cerevisiae
ENSEBUG00000010838	-	91	42.821	ENSSBOG00000035787	DDX52	64	41.750	Saimiri_boliviensis_boliviensis
ENSEBUG00000010838	-	90	43.544	ENSSHAG00000013962	DDX52	61	42.532	Sarcophilus_harrisii
ENSEBUG00000010838	-	91	42.569	ENSSFOG00015005055	ddx52	68	40.250	Scleropages_formosus
ENSEBUG00000010838	-	92	42.432	ENSSLDG00000016999	ddx52	67	41.935	Seriola_lalandi_dorsalis
ENSEBUG00000010838	-	91	41.814	ENSSPUG00000000720	DDX52	59	41.519	Sphenodon_punctatus
ENSEBUG00000010838	-	91	43.577	ENSSSCG00000021275	DDX52	64	42.500	Sus_scrofa
ENSEBUG00000010838	-	91	42.569	ENSTGUG00000008303	-	66	41.562	Taeniopygia_guttata
ENSEBUG00000010838	-	91	40.050	ENSTNIG00000009990	ddx52	64	40.050	Tetraodon_nigroviridis
ENSEBUG00000010838	-	91	43.577	ENSTTRG00000008917	DDX52	64	42.500	Tursiops_truncatus
ENSEBUG00000010838	-	91	42.821	ENSVVUG00000020209	DDX52	73	42.025	Vulpes_vulpes
ENSEBUG00000010838	-	91	51.220	ENSXETG00000025903	ddx52	57	51.220	Xenopus_tropicalis