EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000010930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 7588 bases
Position: chrFYBX02009681.1:3172613-3180200
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000017492	RRM_1	PF00076.22	3.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000018069	-	1380	-	ENSEBUP00000017492	459 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000010930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000010930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000010930	-	80	48.426	ENSEBUG00000009015	-	71	48.426
ENSEBUG00000010930	-	91	34.978	ENSEBUG00000016806	rbm12	76	34.978
ENSEBUG00000010930	-	86	57.674	ENSEBUG00000004292	-	76	56.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000010930	-	84	33.254	ENSACIG00000014943	rbm12b	97	32.181	Amphilophus_citrinellus
ENSEBUG00000010930	-	56	32.740	ENSAPEG00000022079	rbm12b	75	34.043	Amphiprion_percula
ENSEBUG00000010930	-	85	30.426	ENSATEG00000004578	rbm12b	55	35.714	Anabas_testudineus
ENSEBUG00000010930	-	55	39.189	ENSACLG00000005578	rbm12b	55	39.189	Astatotilapia_calliptera
ENSEBUG00000010930	-	84	31.064	ENSFHEG00000016425	rbm12b	71	30.655	Fundulus_heteroclitus
ENSEBUG00000010930	-	81	40.789	ENSGALG00000035129	RBM12B	57	40.789	Gallus_gallus
ENSEBUG00000010930	-	84	31.078	ENSGAFG00000007224	rbm12b	72	30.189	Gambusia_affinis
ENSEBUG00000010930	-	84	30.769	ENSIPUG00000001167	RBM12B	70	30.769	Ictalurus_punctatus
ENSEBUG00000010930	-	75	55.914	ENSLACG00000007177	RBM12B	57	59.524	Latimeria_chalumnae
ENSEBUG00000010930	-	85	30.625	ENSMAMG00000011998	rbm12b	73	30.508	Mastacembelus_armatus
ENSEBUG00000010930	-	81	39.474	ENSMGAG00000011985	RBM12B	63	30.508	Meleagris_gallopavo
ENSEBUG00000010930	-	84	30.271	ENSMALG00000012059	rbm12b	71	30.290	Monopterus_albus
ENSEBUG00000010930	-	84	30.754	ENSPKIG00000018719	rbm12b	57	36.000	Paramormyrops_kingsleyae
ENSEBUG00000010930	-	56	33.910	ENSPMGG00000012348	-	67	35.443	Periophthalmus_magnuspinnatus
ENSEBUG00000010930	-	84	31.429	ENSPFOG00000020937	rbm12b	69	31.034	Poecilia_formosa
ENSEBUG00000010930	-	84	30.339	ENSSHAG00000015335	RBM12B	52	36.000	Sarcophilus_harrisii
ENSEBUG00000010930	-	84	32.049	ENSSFOG00015001584	rbm12b	72	30.550	Scleropages_formosus
ENSEBUG00000010930	-	84	36.486	ENSSMAG00000019708	rbm12b	66	36.486	Scophthalmus_maximus
ENSEBUG00000010930	-	71	37.838	ENSSDUG00000006856	rbm12b	51	37.838	Seriola_dumerili
ENSEBUG00000010930	-	71	37.838	ENSSLDG00000016156	rbm12b	51	37.838	Seriola_lalandi_dorsalis
ENSEBUG00000010930	-	84	30.248	ENSXETG00000014694	rbm12b	60	41.892	Xenopus_tropicalis