EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011011 (Gene tree)
Gene ID: -
Gene Symbol: THUMPD1
Alias: FLJ20274|Tan1
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 25931 bases
Position: chrFYBX02010154.1:3975271-4001201
Accession: 23807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000017609	THUMP	PF02926.17	3.2e-15	1	1
ENSEBUP00000017621	THUMP	PF02926.17	3.4e-15	1	1
ENSEBUP00000017631	THUMP	PF02926.17	5.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000018207	THUMPD1-203	1493	-	ENSEBUP00000017631	490 (aa)	-	-
ENSEBUT00000018185	THUMPD1-201	1318	-	ENSEBUP00000017609	368 (aa)	-	-
ENSEBUT00000018197	THUMPD1-202	2089	-	ENSEBUP00000017621	377 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011011	THUMPD1	74	42.960	ENSG00000066654	THUMPD1	84	38.931	Homo_sapiens
ENSEBUG00000011011	THUMPD1	80	41.751	ENSAPOG00000008440	thumpd1	90	41.751	Acanthochromis_polyacanthus
ENSEBUG00000011011	THUMPD1	76	43.643	ENSAMEG00000006257	THUMPD1	75	43.299	Ailuropoda_melanoleuca
ENSEBUG00000011011	THUMPD1	76	42.143	ENSACIG00000024395	thumpd1	79	43.494	Amphilophus_citrinellus
ENSEBUG00000011011	THUMPD1	71	44.318	ENSAOCG00000003509	thumpd1	80	44.151	Amphiprion_ocellaris
ENSEBUG00000011011	THUMPD1	71	44.318	ENSAPEG00000010515	thumpd1	80	44.318	Amphiprion_percula
ENSEBUG00000011011	THUMPD1	83	39.936	ENSATEG00000004737	thumpd1	96	39.936	Anabas_testudineus
ENSEBUG00000011011	THUMPD1	75	42.857	ENSAPLG00000015259	THUMPD1	83	46.341	Anas_platyrhynchos
ENSEBUG00000011011	THUMPD1	71	41.852	ENSACAG00000009625	-	82	42.593	Anolis_carolinensis
ENSEBUG00000011011	THUMPD1	77	34.471	ENSANAG00000027040	-	75	34.471	Aotus_nancymaae
ENSEBUG00000011011	THUMPD1	71	44.906	ENSANAG00000026882	-	76	43.525	Aotus_nancymaae
ENSEBUG00000011011	THUMPD1	64	38.983	ENSANAG00000027311	-	64	38.983	Aotus_nancymaae
ENSEBUG00000011011	THUMPD1	82	40.656	ENSACLG00000004830	thumpd1	80	44.318	Astatotilapia_calliptera
ENSEBUG00000011011	THUMPD1	77	40.845	ENSAMXG00000012356	thumpd1	80	42.593	Astyanax_mexicanus
ENSEBUG00000011011	THUMPD1	82	41.503	ENSBTAG00000047673	THUMPD1	72	44.528	Bos_taurus
ENSEBUG00000011011	THUMPD1	76	42.908	ENSCJAG00000009499	THUMPD1	78	41.980	Callithrix_jacchus
ENSEBUG00000011011	THUMPD1	76	43.793	ENSCAFG00000017985	THUMPD1	76	43.103	Canis_familiaris
ENSEBUG00000011011	THUMPD1	76	43.793	ENSCAFG00020021861	THUMPD1	76	43.103	Canis_lupus_dingo
ENSEBUG00000011011	THUMPD1	76	42.143	ENSCHIG00000010134	THUMPD1	71	43.939	Capra_hircus
ENSEBUG00000011011	THUMPD1	84	39.875	ENSTSYG00000011537	THUMPD1	78	41.980	Carlito_syrichta
ENSEBUG00000011011	THUMPD1	71	44.487	ENSCPOG00000008919	-	72	44.528	Cavia_porcellus
ENSEBUG00000011011	THUMPD1	71	44.487	ENSCPOG00000023684	-	72	44.528	Cavia_porcellus
ENSEBUG00000011011	THUMPD1	74	41.197	ENSCCAG00000019379	-	73	39.344	Cebus_capucinus
ENSEBUG00000011011	THUMPD1	74	43.525	ENSCCAG00000030205	THUMPD1	76	43.525	Cebus_capucinus
ENSEBUG00000011011	THUMPD1	76	36.770	ENSCATG00000020844	-	74	37.455	Cercocebus_atys
ENSEBUG00000011011	THUMPD1	78	41.034	ENSCATG00000040309	THUMPD1	80	41.034	Cercocebus_atys
ENSEBUG00000011011	THUMPD1	76	41.667	ENSCLAG00000016508	THUMPD1	77	41.667	Chinchilla_lanigera
ENSEBUG00000011011	THUMPD1	78	41.034	ENSCSAG00000007610	THUMPD1	80	41.034	Chlorocebus_sabaeus
ENSEBUG00000011011	THUMPD1	71	35.870	ENSCSAG00000009860	-	58	35.870	Chlorocebus_sabaeus
ENSEBUG00000011011	THUMPD1	77	42.568	ENSCHOG00000005587	THUMPD1	76	42.955	Choloepus_hoffmanni
ENSEBUG00000011011	THUMPD1	71	44.906	ENSCPBG00000019055	THUMPD1	73	44.906	Chrysemys_picta_bellii
ENSEBUG00000011011	THUMPD1	65	40.000	ENSCANG00000038770	THUMPD1	75	40.000	Colobus_angolensis_palliatus
ENSEBUG00000011011	THUMPD1	66	40.000	ENSCANG00000035822	-	77	40.000	Colobus_angolensis_palliatus
ENSEBUG00000011011	THUMPD1	72	43.657	ENSCGRG00001014829	Thumpd1	73	43.657	Cricetulus_griseus_chok1gshd
ENSEBUG00000011011	THUMPD1	72	43.657	ENSCGRG00000000060	Thumpd1	73	43.657	Cricetulus_griseus_crigri
ENSEBUG00000011011	THUMPD1	73	41.791	ENSCSEG00000002041	thumpd1	83	41.791	Cynoglossus_semilaevis
ENSEBUG00000011011	THUMPD1	72	42.910	ENSCVAG00000014960	thumpd1	80	43.233	Cyprinodon_variegatus
ENSEBUG00000011011	THUMPD1	80	41.528	ENSDARG00000100264	thumpd1	74	43.750	Danio_rerio
ENSEBUG00000011011	THUMPD1	77	42.034	ENSDNOG00000043510	THUMPD1	74	43.416	Dasypus_novemcinctus
ENSEBUG00000011011	THUMPD1	74	42.960	ENSDORG00000028216	Thumpd1	75	42.960	Dipodomys_ordii
ENSEBUG00000011011	THUMPD1	71	30.741	FBgn0035532	CG15014	81	30.634	Drosophila_melanogaster
ENSEBUG00000011011	THUMPD1	74	40.580	ENSETEG00000002763	THUMPD1	71	37.812	Echinops_telfairi
ENSEBUG00000011011	THUMPD1	74	43.116	ENSECAG00000005354	THUMPD1	75	42.909	Equus_caballus
ENSEBUG00000011011	THUMPD1	71	44.944	ENSEEUG00000011256	THUMPD1	62	44.944	Erinaceus_europaeus
ENSEBUG00000011011	THUMPD1	71	44.275	ENSELUG00000013612	thumpd1	60	44.275	Esox_lucius
ENSEBUG00000011011	THUMPD1	76	43.103	ENSFCAG00000039296	THUMPD1	76	43.103	Felis_catus
ENSEBUG00000011011	THUMPD1	61	45.175	ENSFALG00000014029	THUMPD1	78	45.614	Ficedula_albicollis
ENSEBUG00000011011	THUMPD1	75	41.577	ENSFHEG00000013319	thumpd1	77	41.971	Fundulus_heteroclitus
ENSEBUG00000011011	THUMPD1	78	44.097	ENSGMOG00000003369	thumpd1	84	45.620	Gadus_morhua
ENSEBUG00000011011	THUMPD1	73	42.066	ENSGAFG00000011000	thumpd1	82	41.912	Gambusia_affinis
ENSEBUG00000011011	THUMPD1	80	39.617	ENSGACG00000019511	thumpd1	79	42.222	Gasterosteus_aculeatus
ENSEBUG00000011011	THUMPD1	71	44.906	ENSGAGG00000008225	THUMPD1	80	44.906	Gopherus_agassizii
ENSEBUG00000011011	THUMPD1	71	44.528	ENSGGOG00000005231	-	58	44.528	Gorilla_gorilla
ENSEBUG00000011011	THUMPD1	57	36.620	ENSGGOG00000043232	-	63	36.620	Gorilla_gorilla
ENSEBUG00000011011	THUMPD1	82	40.328	ENSHBUG00000017996	thumpd1	80	43.985	Haplochromis_burtoni
ENSEBUG00000011011	THUMPD1	74	42.391	ENSHGLG00000011001	-	78	41.096	Heterocephalus_glaber_female
ENSEBUG00000011011	THUMPD1	74	42.754	ENSHGLG00100016023	THUMPD1	78	41.438	Heterocephalus_glaber_male
ENSEBUG00000011011	THUMPD1	64	37.917	ENSHCOG00000008618	thumpd1	54	37.917	Hippocampus_comes
ENSEBUG00000011011	THUMPD1	66	42.213	ENSIPUG00000012500	thumpd1	62	42.279	Ictalurus_punctatus
ENSEBUG00000011011	THUMPD1	76	42.708	ENSSTOG00000007011	THUMPD1	77	42.708	Ictidomys_tridecemlineatus
ENSEBUG00000011011	THUMPD1	73	43.015	ENSJJAG00000004295	-	75	42.647	Jaculus_jaculus
ENSEBUG00000011011	THUMPD1	78	37.543	ENSKMAG00000009545	thumpd1	64	39.925	Kryptolebias_marmoratus
ENSEBUG00000011011	THUMPD1	76	41.993	ENSLBEG00000009349	thumpd1	82	42.125	Labrus_bergylta
ENSEBUG00000011011	THUMPD1	71	41.438	ENSLACG00000005833	THUMPD1	77	41.438	Latimeria_chalumnae
ENSEBUG00000011011	THUMPD1	78	39.519	ENSLOCG00000000854	thumpd1	81	42.424	Lepisosteus_oculatus
ENSEBUG00000011011	THUMPD1	82	41.042	ENSLAFG00000025838	THUMPD1	81	41.042	Loxodonta_africana
ENSEBUG00000011011	THUMPD1	78	41.034	ENSMFAG00000036996	THUMPD1	80	41.034	Macaca_fascicularis
ENSEBUG00000011011	THUMPD1	65	38.934	ENSMFAG00000041474	-	75	38.934	Macaca_fascicularis
ENSEBUG00000011011	THUMPD1	65	38.934	ENSMMUG00000038414	-	75	38.934	Macaca_mulatta
ENSEBUG00000011011	THUMPD1	78	41.034	ENSMMUG00000004225	THUMPD1	80	41.034	Macaca_mulatta
ENSEBUG00000011011	THUMPD1	65	38.934	ENSMNEG00000038856	-	75	38.934	Macaca_nemestrina
ENSEBUG00000011011	THUMPD1	78	41.034	ENSMNEG00000020726	THUMPD1	80	41.034	Macaca_nemestrina
ENSEBUG00000011011	THUMPD1	78	41.034	ENSMLEG00000036436	THUMPD1	80	41.034	Mandrillus_leucophaeus
ENSEBUG00000011011	THUMPD1	65	39.095	ENSMLEG00000030012	-	75	39.095	Mandrillus_leucophaeus
ENSEBUG00000011011	THUMPD1	76	41.786	ENSMAMG00000006858	thumpd1	80	41.852	Mastacembelus_armatus
ENSEBUG00000011011	THUMPD1	82	40.328	ENSMZEG00005013693	thumpd1	80	43.985	Maylandia_zebra
ENSEBUG00000011011	THUMPD1	51	48.925	ENSMGAG00000010340	THUMPD1	86	48.925	Meleagris_gallopavo
ENSEBUG00000011011	THUMPD1	72	43.609	ENSMAUG00000013306	Thumpd1	73	43.609	Mesocricetus_auratus
ENSEBUG00000011011	THUMPD1	65	37.395	ENSMICG00000030865	-	58	37.333	Microcebus_murinus
ENSEBUG00000011011	THUMPD1	80	41.176	ENSMICG00000038483	-	77	42.215	Microcebus_murinus
ENSEBUG00000011011	THUMPD1	75	42.294	ENSMOCG00000003447	Thumpd1	76	42.294	Microtus_ochrogaster
ENSEBUG00000011011	THUMPD1	81	40.532	ENSMMOG00000011323	thumpd1	79	42.701	Mola_mola
ENSEBUG00000011011	THUMPD1	66	44.939	ENSMODG00000024776	-	72	44.853	Monodelphis_domestica
ENSEBUG00000011011	THUMPD1	72	43.015	ENSMODG00000006971	-	71	44.485	Monodelphis_domestica
ENSEBUG00000011011	THUMPD1	73	42.435	ENSMALG00000019522	thumpd1	84	42.647	Monopterus_albus
ENSEBUG00000011011	THUMPD1	75	41.727	MGP_CAROLIEiJ_G0030382	Thumpd1	77	42.086	Mus_caroli
ENSEBUG00000011011	THUMPD1	75	42.806	ENSMUSG00000030942	Thumpd1	77	42.806	Mus_musculus
ENSEBUG00000011011	THUMPD1	75	43.214	MGP_PahariEiJ_G0013593	Thumpd1	77	43.214	Mus_pahari
ENSEBUG00000011011	THUMPD1	72	44.151	ENSMLUG00000010547	THUMPD1	69	43.820	Myotis_lucifugus
ENSEBUG00000011011	THUMPD1	75	41.727	ENSNGAG00000018643	Thumpd1	76	41.727	Nannospalax_galili
ENSEBUG00000011011	THUMPD1	82	40.264	ENSNBRG00000006987	thumpd1	76	43.123	Neolamprologus_brichardi
ENSEBUG00000011011	THUMPD1	74	42.960	ENSNLEG00000012369	THUMPD1	76	42.960	Nomascus_leucogenys
ENSEBUG00000011011	THUMPD1	56	45.517	ENSOPRG00000011342	THUMPD1	51	45.517	Ochotona_princeps
ENSEBUG00000011011	THUMPD1	71	43.182	ENSODEG00000012360	THUMPD1	72	43.182	Octodon_degus
ENSEBUG00000011011	THUMPD1	73	43.015	ENSONIG00000000146	thumpd1	93	42.909	Oreochromis_niloticus
ENSEBUG00000011011	THUMPD1	82	40.439	ENSOANG00000014297	THUMPD1	69	44.656	Ornithorhynchus_anatinus
ENSEBUG00000011011	THUMPD1	74	43.165	ENSOCUG00000009895	-	76	43.165	Oryctolagus_cuniculus
ENSEBUG00000011011	THUMPD1	71	43.182	ENSORLG00000027557	thumpd1	83	43.182	Oryzias_latipes
ENSEBUG00000011011	THUMPD1	71	42.803	ENSORLG00020010206	thumpd1	82	42.803	Oryzias_latipes_hni
ENSEBUG00000011011	THUMPD1	73	42.537	ENSORLG00015009581	thumpd1	84	42.537	Oryzias_latipes_hsok
ENSEBUG00000011011	THUMPD1	74	42.647	ENSOMEG00000019361	thumpd1	80	42.647	Oryzias_melastigma
ENSEBUG00000011011	THUMPD1	73	42.857	ENSOGAG00000026723	THUMPD1	75	42.857	Otolemur_garnettii
ENSEBUG00000011011	THUMPD1	76	42.349	ENSOARG00000013107	THUMPD1	71	44.151	Ovis_aries
ENSEBUG00000011011	THUMPD1	74	42.960	ENSPPAG00000033818	-	61	42.960	Pan_paniscus
ENSEBUG00000011011	THUMPD1	67	37.652	ENSPPAG00000001653	-	72	37.652	Pan_paniscus
ENSEBUG00000011011	THUMPD1	76	43.103	ENSPPRG00000014118	-	76	43.103	Panthera_pardus
ENSEBUG00000011011	THUMPD1	76	43.103	ENSPTIG00000013856	-	76	43.103	Panthera_tigris_altaica
ENSEBUG00000011011	THUMPD1	74	42.960	ENSPTRG00000007848	THUMPD1	61	42.960	Pan_troglodytes
ENSEBUG00000011011	THUMPD1	64	37.131	ENSPTRG00000046073	-	68	37.131	Pan_troglodytes
ENSEBUG00000011011	THUMPD1	78	41.034	ENSPANG00000025507	THUMPD1	80	41.034	Papio_anubis
ENSEBUG00000011011	THUMPD1	65	38.934	ENSPANG00000034881	-	75	38.934	Papio_anubis
ENSEBUG00000011011	THUMPD1	71	41.985	ENSPKIG00000014491	thumpd1	78	41.887	Paramormyrops_kingsleyae
ENSEBUG00000011011	THUMPD1	68	44.841	ENSPSIG00000012430	THUMPD1	84	44.841	Pelodiscus_sinensis
ENSEBUG00000011011	THUMPD1	75	43.509	ENSPMGG00000014479	thumpd1	92	43.509	Periophthalmus_magnuspinnatus
ENSEBUG00000011011	THUMPD1	63	43.966	ENSPMAG00000001389	thumpd1	95	41.065	Petromyzon_marinus
ENSEBUG00000011011	THUMPD1	71	42.481	ENSPCIG00000029241	THUMPD1	51	44.361	Phascolarctos_cinereus
ENSEBUG00000011011	THUMPD1	73	43.750	ENSPFOG00000012649	thumpd1	83	43.431	Poecilia_formosa
ENSEBUG00000011011	THUMPD1	73	43.542	ENSPLAG00000000137	thumpd1	83	43.223	Poecilia_latipinna
ENSEBUG00000011011	THUMPD1	73	43.911	ENSPMEG00000007750	thumpd1	83	43.590	Poecilia_mexicana
ENSEBUG00000011011	THUMPD1	71	44.318	ENSPREG00000000144	thumpd1	86	44.318	Poecilia_reticulata
ENSEBUG00000011011	THUMPD1	61	43.556	ENSPPYG00000007160	-	74	43.556	Pongo_abelii
ENSEBUG00000011011	THUMPD1	53	46.939	ENSPCAG00000001534	THUMPD1	66	46.939	Procavia_capensis
ENSEBUG00000011011	THUMPD1	78	42.069	ENSPCOG00000024663	THUMPD1	75	43.223	Propithecus_coquereli
ENSEBUG00000011011	THUMPD1	74	41.489	ENSPVAG00000005659	-	74	41.343	Pteropus_vampyrus
ENSEBUG00000011011	THUMPD1	82	40.328	ENSPNYG00000007061	thumpd1	79	43.985	Pundamilia_nyererei
ENSEBUG00000011011	THUMPD1	72	43.609	ENSPNAG00000024872	thumpd1	85	43.609	Pygocentrus_nattereri
ENSEBUG00000011011	THUMPD1	74	42.238	ENSRBIG00000040752	THUMPD1	76	42.238	Rhinopithecus_bieti
ENSEBUG00000011011	THUMPD1	66	40.816	ENSRBIG00000040136	-	79	40.816	Rhinopithecus_bieti
ENSEBUG00000011011	THUMPD1	78	41.034	ENSRROG00000042189	THUMPD1	80	41.034	Rhinopithecus_roxellana
ENSEBUG00000011011	THUMPD1	66	40.408	ENSRROG00000045699	-	79	40.408	Rhinopithecus_roxellana
ENSEBUG00000011011	THUMPD1	77	42.321	ENSSBOG00000034246	THUMPD1	78	42.321	Saimiri_boliviensis_boliviensis
ENSEBUG00000011011	THUMPD1	68	44.061	ENSSHAG00000003853	THUMPD1	77	43.509	Sarcophilus_harrisii
ENSEBUG00000011011	THUMPD1	73	37.828	ENSSFOG00015007512	thumpd1	78	38.577	Scleropages_formosus
ENSEBUG00000011011	THUMPD1	80	40.816	ENSSMAG00000000723	thumpd1	80	41.481	Scophthalmus_maximus
ENSEBUG00000011011	THUMPD1	81	41.479	ENSSDUG00000014502	thumpd1	93	41.158	Seriola_dumerili
ENSEBUG00000011011	THUMPD1	81	41.479	ENSSLDG00000007694	thumpd1	93	41.158	Seriola_lalandi_dorsalis
ENSEBUG00000011011	THUMPD1	73	40.345	ENSSPUG00000005096	THUMPD1	83	42.553	Sphenodon_punctatus
ENSEBUG00000011011	THUMPD1	80	41.472	ENSSPAG00000006993	thumpd1	82	43.223	Stegastes_partitus
ENSEBUG00000011011	THUMPD1	76	43.299	ENSSSCG00000024748	THUMPD1	76	43.299	Sus_scrofa
ENSEBUG00000011011	THUMPD1	65	45.714	ENSTGUG00000009247	THUMPD1	85	46.122	Taeniopygia_guttata
ENSEBUG00000011011	THUMPD1	85	40.125	ENSTRUG00000015656	thumpd1	97	40.187	Takifugu_rubripes
ENSEBUG00000011011	THUMPD1	83	39.806	ENSTNIG00000001584	thumpd1	87	43.116	Tetraodon_nigroviridis
ENSEBUG00000011011	THUMPD1	73	44.565	ENSTBEG00000005252	THUMPD1	73	41.693	Tupaia_belangeri
ENSEBUG00000011011	THUMPD1	76	43.262	ENSTTRG00000016435	THUMPD1	74	44.161	Tursiops_truncatus
ENSEBUG00000011011	THUMPD1	71	45.113	ENSVPAG00000003422	THUMPD1	73	45.113	Vicugna_pacos
ENSEBUG00000011011	THUMPD1	76	43.103	ENSVVUG00000023241	THUMPD1	76	43.103	Vulpes_vulpes
ENSEBUG00000011011	THUMPD1	73	44.280	ENSXMAG00000026052	thumpd1	82	44.118	Xiphophorus_maculatus