EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011178 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 27246 bases
Position: chrFYBX02009867.1:2288013-2315258
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000017877	Gar1	PF04410.14	3.9e-36	1	1
ENSEBUP00000017908	Gar1	PF04410.14	3.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000018452	-	4081	-	ENSEBUP00000017877	221 (aa)	-	-
ENSEBUT00000018484	-	4081	-	ENSEBUP00000017908	221 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011178	gar1	56	70.732	ENSAOCG00000020947	gar1	61	72.308	Amphiprion_ocellaris
ENSEBUG00000011178	gar1	56	70.732	ENSAPEG00000001676	gar1	61	72.308	Amphiprion_percula
ENSEBUG00000011178	gar1	63	70.714	ENSCGRG00001003919	Gar1	50	60.432	Cricetulus_griseus_chok1gshd
ENSEBUG00000011178	gar1	92	48.485	FBgn0011824	CG4038	71	50.735	Drosophila_melanogaster
ENSEBUG00000011178	gar1	85	70.714	ENSMAUG00000016788	Gar1	87	66.667	Mesocricetus_auratus
ENSEBUG00000011178	gar1	62	71.014	ENSMOCG00000001340	Gar1	58	86.957	Microtus_ochrogaster
ENSEBUG00000011178	gar1	81	71.014	MGP_CAROLIEiJ_G0025627	Gar1	91	66.038	Mus_caroli
ENSEBUG00000011178	gar1	79	71.014	ENSMUSG00000028010	Gar1	89	66.038	Mus_musculus
ENSEBUG00000011178	gar1	79	71.739	MGP_PahariEiJ_G0027076	Gar1	58	86.957	Mus_pahari
ENSEBUG00000011178	gar1	79	71.014	MGP_SPRETEiJ_G0026580	Gar1	58	86.957	Mus_spretus
ENSEBUG00000011178	gar1	66	59.589	ENSODEG00000011083	GAR1	50	81.443	Octodon_degus
ENSEBUG00000011178	gar1	70	67.097	ENSSPUG00000008707	GAR1	55	82.828	Sphenodon_punctatus