EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011286 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: -
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 27068 bases
Position: chrFYBX02010095.1:208625-235692
Accession: ZDB-GENE-040914-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018064	DUF1604	PF07713.13	2.4e-32	1	1
ENSEBUP00000018093	DUF1604	PF07713.13	6.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000018669	-	5751	-	ENSEBUP00000018093	917 (aa)	-	-
ENSEBUT00000018640	-	6947	-	ENSEBUP00000018064	888 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011286	gpatch1	91	38.435	ENSG00000076650	GPATCH1	73	61.702	Homo_sapiens
ENSEBUG00000011286	gpatch1	91	38.408	ENSAMEG00000015575	GPATCH1	94	37.555	Ailuropoda_melanoleuca
ENSEBUG00000011286	gpatch1	70	51.381	ENSAOCG00000006668	gpatch1	95	34.443	Amphiprion_ocellaris
ENSEBUG00000011286	gpatch1	83	38.745	ENSATEG00000014494	gpatch1	95	35.722	Anabas_testudineus
ENSEBUG00000011286	gpatch1	80	37.136	ENSAPLG00000007584	GPATCH1	98	34.740	Anas_platyrhynchos
ENSEBUG00000011286	gpatch1	91	38.832	ENSANAG00000027002	GPATCH1	94	37.555	Aotus_nancymaae
ENSEBUG00000011286	gpatch1	72	41.460	ENSACLG00000024740	gpatch1	82	38.141	Astatotilapia_calliptera
ENSEBUG00000011286	gpatch1	72	40.890	ENSAMXG00000020177	gpatch1	99	36.570	Astyanax_mexicanus
ENSEBUG00000011286	gpatch1	91	37.557	ENSBTAG00000000721	GPATCH1	94	36.973	Bos_taurus
ENSEBUG00000011286	gpatch1	91	38.699	ENSCJAG00000000684	GPATCH1	94	37.336	Callithrix_jacchus
ENSEBUG00000011286	gpatch1	91	38.178	ENSCAFG00000007457	GPATCH1	79	37.624	Canis_familiaris
ENSEBUG00000011286	gpatch1	91	38.178	ENSCAFG00020019731	GPATCH1	94	37.568	Canis_lupus_dingo
ENSEBUG00000011286	gpatch1	91	38.365	ENSCHIG00000019626	GPATCH1	94	37.961	Capra_hircus
ENSEBUG00000011286	gpatch1	89	36.585	ENSCAPG00000008827	GPATCH1	94	36.517	Cavia_aperea
ENSEBUG00000011286	gpatch1	92	37.727	ENSCPOG00000024477	GPATCH1	94	36.692	Cavia_porcellus
ENSEBUG00000011286	gpatch1	91	38.347	ENSCCAG00000024676	GPATCH1	94	37.336	Cebus_capucinus
ENSEBUG00000011286	gpatch1	83	39.417	ENSCATG00000043637	GPATCH1	73	62.766	Cercocebus_atys
ENSEBUG00000011286	gpatch1	80	38.562	ENSCLAG00000003395	-	95	36.895	Chinchilla_lanigera
ENSEBUG00000011286	gpatch1	91	38.339	ENSCSAG00000004743	GPATCH1	94	36.997	Chlorocebus_sabaeus
ENSEBUG00000011286	gpatch1	73	43.085	ENSCHOG00000012865	GPATCH1	77	42.021	Choloepus_hoffmanni
ENSEBUG00000011286	gpatch1	80	36.835	ENSCPBG00000000666	GPATCH1	93	36.801	Chrysemys_picta_bellii
ENSEBUG00000011286	gpatch1	83	31.039	ENSCING00000012518	-	99	30.212	Ciona_intestinalis
ENSEBUG00000011286	gpatch1	81	38.006	ENSCANG00000012540	GPATCH1	93	35.262	Colobus_angolensis_palliatus
ENSEBUG00000011286	gpatch1	88	37.209	ENSCGRG00001016736	Gpatch1	94	36.626	Cricetulus_griseus_chok1gshd
ENSEBUG00000011286	gpatch1	90	32.251	ENSCGRG00000005069	Gpatch1	92	31.733	Cricetulus_griseus_crigri
ENSEBUG00000011286	gpatch1	72	36.006	ENSCSEG00000019456	-	99	31.991	Cynoglossus_semilaevis
ENSEBUG00000011286	gpatch1	83	38.452	ENSDARG00000033418	gpatch1	84	38.747	Danio_rerio
ENSEBUG00000011286	gpatch1	91	37.884	ENSDNOG00000005291	GPATCH1	98	37.134	Dasypus_novemcinctus
ENSEBUG00000011286	gpatch1	95	36.142	ENSDORG00000012546	Gpatch1	98	34.978	Dipodomys_ordii
ENSEBUG00000011286	gpatch1	72	39.797	ENSETEG00000003626	GPATCH1	95	34.283	Echinops_telfairi
ENSEBUG00000011286	gpatch1	91	38.276	ENSEASG00005021162	GPATCH1	97	37.053	Equus_asinus_asinus
ENSEBUG00000011286	gpatch1	94	37.057	ENSECAG00000022743	GPATCH1	91	37.077	Equus_caballus
ENSEBUG00000011286	gpatch1	61	51.974	ENSEEUG00000012925	GPATCH1	63	51.974	Erinaceus_europaeus
ENSEBUG00000011286	gpatch1	84	38.049	ENSELUG00000018195	gpatch1	94	36.297	Esox_lucius
ENSEBUG00000011286	gpatch1	91	37.104	ENSFCAG00000014917	GPATCH1	94	37.049	Felis_catus
ENSEBUG00000011286	gpatch1	91	36.271	ENSFALG00000007821	GPATCH1	89	36.610	Ficedula_albicollis
ENSEBUG00000011286	gpatch1	89	37.146	ENSFDAG00000003871	GPATCH1	94	36.322	Fukomys_damarensis
ENSEBUG00000011286	gpatch1	83	35.696	ENSGMOG00000003830	gpatch1	99	33.795	Gadus_morhua
ENSEBUG00000011286	gpatch1	91	37.543	ENSGALG00000004839	GPATCH1	97	36.721	Gallus_gallus
ENSEBUG00000011286	gpatch1	83	39.076	ENSGACG00000017544	gpatch1	97	37.214	Gasterosteus_aculeatus
ENSEBUG00000011286	gpatch1	91	36.023	ENSGAGG00000010067	GPATCH1	95	35.155	Gopherus_agassizii
ENSEBUG00000011286	gpatch1	88	38.361	ENSGGOG00000010862	GPATCH1	93	36.765	Gorilla_gorilla
ENSEBUG00000011286	gpatch1	72	42.190	ENSHBUG00000023462	gpatch1	96	35.916	Haplochromis_burtoni
ENSEBUG00000011286	gpatch1	92	38.020	ENSHGLG00000009334	GPATCH1	94	37.202	Heterocephalus_glaber_female
ENSEBUG00000011286	gpatch1	92	37.908	ENSHGLG00100018074	GPATCH1	94	37.093	Heterocephalus_glaber_male
ENSEBUG00000011286	gpatch1	73	42.076	ENSIPUG00000014977	gpatch1	95	37.033	Ictalurus_punctatus
ENSEBUG00000011286	gpatch1	91	37.514	ENSSTOG00000003720	GPATCH1	94	36.017	Ictidomys_tridecemlineatus
ENSEBUG00000011286	gpatch1	91	37.915	ENSJJAG00000023765	Gpatch1	94	36.744	Jaculus_jaculus
ENSEBUG00000011286	gpatch1	72	42.587	ENSKMAG00000017950	gpatch1	95	37.018	Kryptolebias_marmoratus
ENSEBUG00000011286	gpatch1	72	40.825	ENSLBEG00000026527	gpatch1	93	35.700	Labrus_bergylta
ENSEBUG00000011286	gpatch1	80	37.795	ENSLACG00000008130	GPATCH1	94	36.075	Latimeria_chalumnae
ENSEBUG00000011286	gpatch1	83	38.868	ENSLOCG00000001800	gpatch1	95	36.218	Lepisosteus_oculatus
ENSEBUG00000011286	gpatch1	91	37.572	ENSLAFG00000013589	GPATCH1	94	36.243	Loxodonta_africana
ENSEBUG00000011286	gpatch1	91	38.488	ENSMFAG00000034418	GPATCH1	73	62.766	Macaca_fascicularis
ENSEBUG00000011286	gpatch1	91	39.155	ENSMMUG00000011790	GPATCH1	73	62.766	Macaca_mulatta
ENSEBUG00000011286	gpatch1	91	38.488	ENSMNEG00000045084	GPATCH1	73	61.702	Macaca_nemestrina
ENSEBUG00000011286	gpatch1	66	36.535	ENSMLEG00000043840	GPATCH1	87	34.474	Mandrillus_leucophaeus
ENSEBUG00000011286	gpatch1	72	41.460	ENSMZEG00005001926	gpatch1	82	38.141	Maylandia_zebra
ENSEBUG00000011286	gpatch1	88	37.471	ENSMGAG00000005775	GPATCH1	93	37.130	Meleagris_gallopavo
ENSEBUG00000011286	gpatch1	91	35.334	ENSMICG00000004829	GPATCH1	96	34.486	Microcebus_murinus
ENSEBUG00000011286	gpatch1	91	38.364	ENSMOCG00000000174	Gpatch1	95	37.093	Microtus_ochrogaster
ENSEBUG00000011286	gpatch1	91	35.864	ENSMMOG00000002140	gpatch1	96	35.886	Mola_mola
ENSEBUG00000011286	gpatch1	91	35.550	ENSMODG00000012226	GPATCH1	94	34.848	Monodelphis_domestica
ENSEBUG00000011286	gpatch1	73	41.418	ENSMALG00000014386	gpatch1	95	36.325	Monopterus_albus
ENSEBUG00000011286	gpatch1	94	36.865	ENSMUSG00000063808	Gpatch1	96	61.702	Mus_musculus
ENSEBUG00000011286	gpatch1	94	37.017	MGP_PahariEiJ_G0012816	Gpatch1	96	62.766	Mus_pahari
ENSEBUG00000011286	gpatch1	83	38.577	MGP_SPRETEiJ_G0030681	Gpatch1	96	62.766	Mus_spretus
ENSEBUG00000011286	gpatch1	91	37.359	ENSMPUG00000007658	GPATCH1	94	36.677	Mustela_putorius_furo
ENSEBUG00000011286	gpatch1	91	37.810	ENSMLUG00000012161	GPATCH1	94	36.916	Myotis_lucifugus
ENSEBUG00000011286	gpatch1	91	38.276	ENSNGAG00000012455	Gpatch1	94	36.482	Nannospalax_galili
ENSEBUG00000011286	gpatch1	83	39.544	ENSNLEG00000007659	GPATCH1	73	61.702	Nomascus_leucogenys
ENSEBUG00000011286	gpatch1	64	34.551	ENSMEUG00000015174	GPATCH1	62	34.551	Notamacropus_eugenii
ENSEBUG00000011286	gpatch1	91	36.818	ENSODEG00000007103	GPATCH1	94	37.202	Octodon_degus
ENSEBUG00000011286	gpatch1	83	39.033	ENSONIG00000003302	gpatch1	96	36.422	Oreochromis_niloticus
ENSEBUG00000011286	gpatch1	96	35.691	ENSOANG00000012732	GPATCH1	94	35.575	Ornithorhynchus_anatinus
ENSEBUG00000011286	gpatch1	91	38.470	ENSOCUG00000015905	GPATCH1	94	37.609	Oryctolagus_cuniculus
ENSEBUG00000011286	gpatch1	83	40.000	ENSORLG00000018706	gpatch1	94	38.503	Oryzias_latipes
ENSEBUG00000011286	gpatch1	73	41.384	ENSOMEG00000022688	gpatch1	96	36.585	Oryzias_melastigma
ENSEBUG00000011286	gpatch1	84	39.130	ENSOGAG00000004016	GPATCH1	98	38.228	Otolemur_garnettii
ENSEBUG00000011286	gpatch1	91	38.629	ENSOARG00000004365	GPATCH1	94	37.773	Ovis_aries
ENSEBUG00000011286	gpatch1	91	38.259	ENSPPAG00000020990	GPATCH1	74	61.053	Pan_paniscus
ENSEBUG00000011286	gpatch1	91	37.615	ENSPPRG00000017245	GPATCH1	94	36.842	Panthera_pardus
ENSEBUG00000011286	gpatch1	91	37.975	ENSPTIG00000019649	GPATCH1	94	37.281	Panthera_tigris_altaica
ENSEBUG00000011286	gpatch1	91	38.373	ENSPTRG00000010803	GPATCH1	73	61.702	Pan_troglodytes
ENSEBUG00000011286	gpatch1	91	38.373	ENSPANG00000012374	GPATCH1	99	37.077	Papio_anubis
ENSEBUG00000011286	gpatch1	83	38.405	ENSPKIG00000020745	gpatch1	79	38.351	Paramormyrops_kingsleyae
ENSEBUG00000011286	gpatch1	83	36.637	ENSPSIG00000013433	GPATCH1	94	35.132	Pelodiscus_sinensis
ENSEBUG00000011286	gpatch1	91	38.225	ENSPEMG00000000636	Gpatch1	95	37.946	Peromyscus_maniculatus_bairdii
ENSEBUG00000011286	gpatch1	91	35.909	ENSPCIG00000021003	GPATCH1	99	35.059	Phascolarctos_cinereus
ENSEBUG00000011286	gpatch1	72	39.941	ENSPREG00000008264	gpatch1	79	39.143	Poecilia_reticulata
ENSEBUG00000011286	gpatch1	91	36.552	ENSPPYG00000009824	GPATCH1	94	36.105	Pongo_abelii
ENSEBUG00000011286	gpatch1	75	34.551	ENSPCAG00000005931	GPATCH1	79	33.624	Procavia_capensis
ENSEBUG00000011286	gpatch1	91	36.497	ENSPCOG00000009674	GPATCH1	95	36.674	Propithecus_coquereli
ENSEBUG00000011286	gpatch1	73	40.059	ENSPVAG00000017767	GPATCH1	73	38.819	Pteropus_vampyrus
ENSEBUG00000011286	gpatch1	83	39.196	ENSPNYG00000018189	gpatch1	92	37.890	Pundamilia_nyererei
ENSEBUG00000011286	gpatch1	89	41.822	ENSPNAG00000013187	gpatch1	96	34.521	Pygocentrus_nattereri
ENSEBUG00000011286	gpatch1	94	37.307	ENSRNOG00000011584	Gpatch1	94	37.134	Rattus_norvegicus
ENSEBUG00000011286	gpatch1	91	34.506	ENSRBIG00000034723	GPATCH1	95	33.297	Rhinopithecus_bieti
ENSEBUG00000011286	gpatch1	91	38.009	ENSRROG00000024428	GPATCH1	73	62.766	Rhinopithecus_roxellana
ENSEBUG00000011286	gpatch1	91	38.532	ENSSBOG00000034650	GPATCH1	94	37.268	Saimiri_boliviensis_boliviensis
ENSEBUG00000011286	gpatch1	91	36.770	ENSSHAG00000016016	GPATCH1	95	35.939	Sarcophilus_harrisii
ENSEBUG00000011286	gpatch1	83	36.642	ENSSFOG00015011535	gpatch1	93	34.567	Scleropages_formosus
ENSEBUG00000011286	gpatch1	80	40.535	ENSSMAG00000002883	gpatch1	90	40.326	Scophthalmus_maximus
ENSEBUG00000011286	gpatch1	72	41.797	ENSSDUG00000007444	gpatch1	95	36.831	Seriola_dumerili
ENSEBUG00000011286	gpatch1	83	38.471	ENSSLDG00000002856	gpatch1	92	37.819	Seriola_lalandi_dorsalis
ENSEBUG00000011286	gpatch1	71	41.729	ENSSARG00000004108	GPATCH1	70	40.835	Sorex_araneus
ENSEBUG00000011286	gpatch1	92	37.255	ENSSSCG00000002865	GPATCH1	97	37.296	Sus_scrofa
ENSEBUG00000011286	gpatch1	83	38.005	ENSTGUG00000009401	GPATCH1	96	36.412	Taeniopygia_guttata
ENSEBUG00000011286	gpatch1	83	38.143	ENSTRUG00000025081	gpatch1	95	36.198	Takifugu_rubripes
ENSEBUG00000011286	gpatch1	83	38.143	ENSTRUG00000005785	-	95	36.198	Takifugu_rubripes
ENSEBUG00000011286	gpatch1	83	38.376	ENSTNIG00000002554	gpatch1	99	38.518	Tetraodon_nigroviridis
ENSEBUG00000011286	gpatch1	55	37.500	ENSTBEG00000007750	-	70	37.870	Tupaia_belangeri
ENSEBUG00000011286	gpatch1	81	47.809	ENSTTRG00000012221	GPATCH1	83	47.012	Tursiops_truncatus
ENSEBUG00000011286	gpatch1	91	37.742	ENSUMAG00000014645	GPATCH1	76	63.830	Ursus_maritimus
ENSEBUG00000011286	gpatch1	80	51.977	ENSVPAG00000010313	GPATCH1	88	51.613	Vicugna_pacos
ENSEBUG00000011286	gpatch1	91	38.123	ENSVVUG00000016572	GPATCH1	94	37.514	Vulpes_vulpes
ENSEBUG00000011286	gpatch1	84	32.210	ENSXETG00000018276	gpatch1	99	32.029	Xenopus_tropicalis