EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000011442 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 211067 bases
Position: chrFYBX02009309.1:1572556-1783622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018381	ResIII	PF04851.15	6.4e-09	1	1
ENSEBUP00000018381	BRK	PF07533.16	7.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000018957	-	4362	-	ENSEBUP00000018381	1453 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000011442	-	88	61.822	ENSEBUG00000002449	-	96	62.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011442	-	96	69.649	ENSG00000080503	SMARCA2	93	100.000	Homo_sapiens
ENSEBUG00000011442	-	97	68.528	ENSAPOG00000002641	SMARCA2	99	72.820	Acanthochromis_polyacanthus
ENSEBUG00000011442	-	90	68.680	ENSAMEG00000012325	SMARCA2	94	76.344	Ailuropoda_melanoleuca
ENSEBUG00000011442	-	97	69.444	ENSACIG00000015607	SMARCA2	95	69.332	Amphilophus_citrinellus
ENSEBUG00000011442	-	97	68.887	ENSAOCG00000009647	-	95	70.348	Amphiprion_ocellaris
ENSEBUG00000011442	-	97	68.286	ENSAPEG00000007646	SMARCA2	98	72.661	Amphiprion_percula
ENSEBUG00000011442	-	97	68.877	ENSATEG00000006916	SMARCA2	94	69.221	Anabas_testudineus
ENSEBUG00000011442	-	90	70.410	ENSAPLG00000013873	SMARCA2	92	70.763	Anas_platyrhynchos
ENSEBUG00000011442	-	93	70.494	ENSACAG00000002423	SMARCA2	94	70.348	Anolis_carolinensis
ENSEBUG00000011442	-	94	71.349	ENSANAG00000026498	SMARCA2	97	73.027	Aotus_nancymaae
ENSEBUG00000011442	-	97	69.786	ENSACLG00000004248	SMARCA2	95	69.705	Astatotilapia_calliptera
ENSEBUG00000011442	-	93	71.510	ENSAMXG00000012404	smarca2	95	69.134	Astyanax_mexicanus
ENSEBUG00000011442	-	94	71.853	ENSBTAG00000007494	SMARCA2	94	71.938	Bos_taurus
ENSEBUG00000011442	-	96	70.321	ENSCJAG00000010710	SMARCA2	98	71.641	Callithrix_jacchus
ENSEBUG00000011442	-	94	71.074	ENSCAFG00000002013	SMARCA2	94	71.765	Canis_familiaris
ENSEBUG00000011442	-	76	78.777	ENSCAFG00020026802	SMARCA2	95	78.975	Canis_lupus_dingo
ENSEBUG00000011442	-	94	71.853	ENSCHIG00000025863	SMARCA2	94	72.005	Capra_hircus
ENSEBUG00000011442	-	96	74.682	ENSTSYG00000003858	SMARCA2	95	70.402	Carlito_syrichta
ENSEBUG00000011442	-	97	69.014	ENSCAPG00000002890	SMARCA2	95	70.007	Cavia_aperea
ENSEBUG00000011442	-	97	69.913	ENSCPOG00000005475	SMARCA2	94	71.123	Cavia_porcellus
ENSEBUG00000011442	-	96	70.458	ENSCCAG00000030636	SMARCA2	98	72.571	Cebus_capucinus
ENSEBUG00000011442	-	94	70.859	ENSCATG00000031470	SMARCA2	98	72.563	Cercocebus_atys
ENSEBUG00000011442	-	96	70.220	ENSCLAG00000014484	SMARCA2	95	69.902	Chinchilla_lanigera
ENSEBUG00000011442	-	93	71.140	ENSCSAG00000008650	SMARCA2	99	70.490	Chlorocebus_sabaeus
ENSEBUG00000011442	-	85	69.504	ENSCHOG00000004316	SMARCA2	85	69.483	Choloepus_hoffmanni
ENSEBUG00000011442	-	93	70.317	ENSCPBG00000025463	SMARCA2	94	70.678	Chrysemys_picta_bellii
ENSEBUG00000011442	-	97	69.933	ENSCANG00000039597	SMARCA2	97	72.246	Colobus_angolensis_palliatus
ENSEBUG00000011442	-	98	64.812	ENSCGRG00001002323	Smarca2	94	66.734	Cricetulus_griseus_chok1gshd
ENSEBUG00000011442	-	97	67.498	ENSCSEG00000019311	SMARCA2	94	67.811	Cynoglossus_semilaevis
ENSEBUG00000011442	-	87	69.156	ENSCVAG00000016571	SMARCA2	97	70.767	Cyprinodon_variegatus
ENSEBUG00000011442	-	97	67.966	ENSDARG00000008904	smarca2	95	69.150	Danio_rerio
ENSEBUG00000011442	-	94	70.325	ENSDNOG00000006402	SMARCA2	94	70.046	Dasypus_novemcinctus
ENSEBUG00000011442	-	97	69.800	ENSDORG00000014832	Smarca2	95	70.185	Dipodomys_ordii
ENSEBUG00000011442	-	82	58.327	FBgn0000212	brm	92	52.510	Drosophila_melanogaster
ENSEBUG00000011442	-	94	71.527	ENSEASG00005010312	SMARCA2	94	71.621	Equus_asinus_asinus
ENSEBUG00000011442	-	65	66.419	ENSEEUG00000015540	-	63	67.337	Erinaceus_europaeus
ENSEBUG00000011442	-	96	69.494	ENSELUG00000010318	smarca2	95	70.625	Esox_lucius
ENSEBUG00000011442	-	94	70.937	ENSFCAG00000001568	SMARCA2	94	71.563	Felis_catus
ENSEBUG00000011442	-	95	69.539	ENSFALG00000010416	SMARCA2	95	72.175	Ficedula_albicollis
ENSEBUG00000011442	-	94	69.844	ENSFDAG00000010502	SMARCA2	94	70.331	Fukomys_damarensis
ENSEBUG00000011442	-	97	68.612	ENSFHEG00000021250	SMARCA2	95	69.348	Fundulus_heteroclitus
ENSEBUG00000011442	-	96	68.725	ENSGMOG00000014229	SMARCA2	95	69.128	Gadus_morhua
ENSEBUG00000011442	-	93	70.014	ENSGALG00000010164	SMARCA2	94	70.936	Gallus_gallus
ENSEBUG00000011442	-	97	65.841	ENSGAFG00000001164	SMARCA2	95	67.076	Gambusia_affinis
ENSEBUG00000011442	-	97	68.598	ENSGACG00000014488	SMARCA2	96	68.742	Gasterosteus_aculeatus
ENSEBUG00000011442	-	93	70.317	ENSGAGG00000024412	SMARCA2	95	69.882	Gopherus_agassizii
ENSEBUG00000011442	-	89	77.807	ENSGGOG00000000513	SMARCA2	94	69.428	Gorilla_gorilla
ENSEBUG00000011442	-	97	69.673	ENSHBUG00000006691	SMARCA2	94	69.960	Haplochromis_burtoni
ENSEBUG00000011442	-	93	75.947	ENSHGLG00000005215	SMARCA2	94	69.960	Heterocephalus_glaber_female
ENSEBUG00000011442	-	97	70.904	ENSHGLG00100010496	SMARCA2	94	71.847	Heterocephalus_glaber_male
ENSEBUG00000011442	-	93	68.318	ENSHCOG00000015348	-	99	67.829	Hippocampus_comes
ENSEBUG00000011442	-	95	69.886	ENSIPUG00000011060	smarca2	98	71.408	Ictalurus_punctatus
ENSEBUG00000011442	-	94	70.536	ENSSTOG00000006812	SMARCA2	95	70.153	Ictidomys_tridecemlineatus
ENSEBUG00000011442	-	94	70.532	ENSJJAG00000010867	Smarca2	94	70.942	Jaculus_jaculus
ENSEBUG00000011442	-	97	67.660	ENSKMAG00000015844	-	95	67.945	Kryptolebias_marmoratus
ENSEBUG00000011442	-	93	69.618	ENSLOCG00000011499	smarca2	95	69.701	Lepisosteus_oculatus
ENSEBUG00000011442	-	94	70.197	ENSLAFG00000014061	SMARCA2	94	70.304	Loxodonta_africana
ENSEBUG00000011442	-	94	70.315	ENSMFAG00000003814	SMARCA2	97	71.106	Macaca_fascicularis
ENSEBUG00000011442	-	96	70.502	ENSMMUG00000015279	SMARCA2	95	70.290	Macaca_mulatta
ENSEBUG00000011442	-	96	69.608	ENSMNEG00000041069	SMARCA2	99	71.167	Macaca_nemestrina
ENSEBUG00000011442	-	97	69.205	ENSMLEG00000027418	SMARCA2	98	71.449	Mandrillus_leucophaeus
ENSEBUG00000011442	-	97	68.462	ENSMAMG00000003056	SMARCA2	99	70.893	Mastacembelus_armatus
ENSEBUG00000011442	-	97	69.786	ENSMZEG00005020709	SMARCA2	94	69.705	Maylandia_zebra
ENSEBUG00000011442	-	75	62.319	ENSMGAG00000005160	-	99	64.011	Meleagris_gallopavo
ENSEBUG00000011442	-	94	71.756	ENSMICG00000005162	SMARCA2	98	73.551	Microcebus_murinus
ENSEBUG00000011442	-	98	69.522	ENSMOCG00000001611	Smarca2	96	69.526	Microtus_ochrogaster
ENSEBUG00000011442	-	96	68.813	ENSMMOG00000014196	SMARCA2	95	70.232	Mola_mola
ENSEBUG00000011442	-	93	70.503	ENSMODG00000003578	SMARCA2	94	70.733	Monodelphis_domestica
ENSEBUG00000011442	-	97	68.675	ENSMALG00000009611	SMARCA2	94	69.966	Monopterus_albus
ENSEBUG00000011442	-	81	75.382	MGP_CAROLIEiJ_G0022841	Smarca2	93	71.499	Mus_caroli
ENSEBUG00000011442	-	81	75.463	ENSMUSG00000024921	Smarca2	93	100.000	Mus_musculus
ENSEBUG00000011442	-	98	73.302	MGP_PahariEiJ_G0014334	Smarca2	93	71.702	Mus_pahari
ENSEBUG00000011442	-	81	74.900	MGP_SPRETEiJ_G0023759	Smarca2	93	71.499	Mus_spretus
ENSEBUG00000011442	-	77	75.475	ENSMPUG00000005171	SMARCA2	89	76.427	Mustela_putorius_furo
ENSEBUG00000011442	-	94	66.510	ENSMLUG00000002342	SMARCA2	95	66.732	Myotis_lucifugus
ENSEBUG00000011442	-	94	69.559	ENSNGAG00000000108	Smarca2	94	69.874	Nannospalax_galili
ENSEBUG00000011442	-	87	63.922	ENSNBRG00000017998	SMARCA2	94	77.114	Neolamprologus_brichardi
ENSEBUG00000011442	-	94	69.945	ENSNLEG00000008575	SMARCA2	97	72.012	Nomascus_leucogenys
ENSEBUG00000011442	-	93	67.731	ENSMEUG00000009812	SMARCA2	92	67.945	Notamacropus_eugenii
ENSEBUG00000011442	-	77	72.405	ENSOPRG00000013474	SMARCA2	94	66.445	Ochotona_princeps
ENSEBUG00000011442	-	81	75.606	ENSODEG00000005452	SMARCA2	94	70.093	Octodon_degus
ENSEBUG00000011442	-	97	67.771	ENSONIG00000014163	SMARCA2	95	67.339	Oreochromis_niloticus
ENSEBUG00000011442	-	50	77.191	ENSOANG00000008299	-	95	81.402	Ornithorhynchus_anatinus
ENSEBUG00000011442	-	97	68.176	ENSORLG00000020820	SMARCA2	99	70.661	Oryzias_latipes
ENSEBUG00000011442	-	97	68.221	ENSORLG00015006289	SMARCA2	99	70.636	Oryzias_latipes_hsok
ENSEBUG00000011442	-	97	69.422	ENSOMEG00000009736	-	97	69.363	Oryzias_melastigma
ENSEBUG00000011442	-	77	77.553	ENSOGAG00000017053	SMARCA2	95	69.554	Otolemur_garnettii
ENSEBUG00000011442	-	94	71.478	ENSOARG00000013265	SMARCA2	94	71.505	Ovis_aries
ENSEBUG00000011442	-	88	77.901	ENSPPAG00000038717	SMARCA2	97	71.673	Pan_paniscus
ENSEBUG00000011442	-	94	71.006	ENSPPRG00000001879	SMARCA2	94	71.631	Panthera_pardus
ENSEBUG00000011442	-	96	69.794	ENSPTRG00000051168	SMARCA2	97	72.480	Pan_troglodytes
ENSEBUG00000011442	-	94	69.840	ENSPANG00000025121	SMARCA2	94	69.106	Papio_anubis
ENSEBUG00000011442	-	97	70.285	ENSPKIG00000018469	-	94	70.685	Paramormyrops_kingsleyae
ENSEBUG00000011442	-	93	70.391	ENSPSIG00000006284	SMARCA2	94	70.545	Pelodiscus_sinensis
ENSEBUG00000011442	-	95	66.667	ENSPMGG00000013696	-	94	67.994	Periophthalmus_magnuspinnatus
ENSEBUG00000011442	-	94	70.363	ENSPEMG00000019821	Smarca2	96	69.176	Peromyscus_maniculatus_bairdii
ENSEBUG00000011442	-	97	70.736	ENSPMAG00000005337	-	97	72.233	Petromyzon_marinus
ENSEBUG00000011442	-	95	72.330	ENSPCIG00000015658	SMARCA2	94	72.461	Phascolarctos_cinereus
ENSEBUG00000011442	-	97	68.084	ENSPFOG00000001856	SMARCA2	95	68.373	Poecilia_formosa
ENSEBUG00000011442	-	97	69.656	ENSPLAG00000017829	SMARCA2	94	70.448	Poecilia_latipinna
ENSEBUG00000011442	-	97	68.421	ENSPMEG00000001815	-	94	70.041	Poecilia_mexicana
ENSEBUG00000011442	-	97	67.718	ENSPREG00000013800	SMARCA2	95	68.173	Poecilia_reticulata
ENSEBUG00000011442	-	96	70.100	ENSPPYG00000019258	SMARCA2	95	69.895	Pongo_abelii
ENSEBUG00000011442	-	70	87.879	ENSPCAG00000016969	SMARCA2	68	87.879	Procavia_capensis
ENSEBUG00000011442	-	94	69.347	ENSPCOG00000025709	SMARCA2	98	70.597	Propithecus_coquereli
ENSEBUG00000011442	-	86	76.364	ENSPVAG00000000901	SMARCA2	87	75.665	Pteropus_vampyrus
ENSEBUG00000011442	-	97	66.931	ENSPNYG00000004533	SMARCA2	94	66.268	Pundamilia_nyererei
ENSEBUG00000011442	-	93	69.536	ENSPNAG00000014635	smarca2	94	69.332	Pygocentrus_nattereri
ENSEBUG00000011442	-	81	74.148	ENSRNOG00000011931	Smarca2	93	71.307	Rattus_norvegicus
ENSEBUG00000011442	-	97	69.344	ENSRBIG00000038618	SMARCA2	98	71.633	Rhinopithecus_bieti
ENSEBUG00000011442	-	94	70.292	ENSRROG00000019271	SMARCA2	98	71.837	Rhinopithecus_roxellana
ENSEBUG00000011442	-	89	78.213	ENSSBOG00000034827	SMARCA2	94	71.458	Saimiri_boliviensis_boliviensis
ENSEBUG00000011442	-	97	68.668	ENSSHAG00000007884	SMARCA2	94	70.733	Sarcophilus_harrisii
ENSEBUG00000011442	-	93	72.636	ENSSFOG00015014870	SMARCA2	96	73.256	Scleropages_formosus
ENSEBUG00000011442	-	97	69.697	ENSSMAG00000013707	SMARCA2	94	70.620	Scophthalmus_maximus
ENSEBUG00000011442	-	97	69.513	ENSSDUG00000008852	-	94	70.410	Seriola_dumerili
ENSEBUG00000011442	-	97	68.605	ENSSLDG00000025449	SMARCA2	94	69.215	Seriola_lalandi_dorsalis
ENSEBUG00000011442	-	83	77.371	ENSSARG00000007888	SMARCA2	86	75.410	Sorex_araneus
ENSEBUG00000011442	-	90	72.238	ENSSPUG00000001629	SMARCA2	91	73.171	Sphenodon_punctatus
ENSEBUG00000011442	-	97	69.589	ENSSPAG00000020091	-	97	69.939	Stegastes_partitus
ENSEBUG00000011442	-	94	71.784	ENSSSCG00000005232	SMARCA2	94	71.938	Sus_scrofa
ENSEBUG00000011442	-	96	68.289	ENSTGUG00000005460	SMARCA2	94	70.120	Taeniopygia_guttata
ENSEBUG00000011442	-	97	68.121	ENSTRUG00000015619	SMARCA2	95	68.652	Takifugu_rubripes
ENSEBUG00000011442	-	61	90.476	ENSTBEG00000008767	SMARCA2	66	90.476	Tupaia_belangeri
ENSEBUG00000011442	-	94	69.959	ENSTTRG00000002033	SMARCA2	94	70.498	Tursiops_truncatus
ENSEBUG00000011442	-	90	73.488	ENSUAMG00000024701	SMARCA2	98	73.082	Ursus_americanus
ENSEBUG00000011442	-	87	69.244	ENSVPAG00000001204	SMARCA2	99	64.608	Vicugna_pacos
ENSEBUG00000011442	-	76	76.877	ENSVVUG00000004598	SMARCA2	97	77.082	Vulpes_vulpes
ENSEBUG00000011442	-	80	73.867	ENSXETG00000015299	smarca2	74	75.667	Xenopus_tropicalis
ENSEBUG00000011442	-	92	69.286	ENSXCOG00000011073	SMARCA2	99	69.468	Xiphophorus_couchianus
ENSEBUG00000011442	-	97	67.710	ENSXMAG00000015611	SMARCA2	95	68.583	Xiphophorus_maculatus