EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011534 (Gene tree)
Gene ID: -
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 157520 bases
Position: chrFYBX02010396.1:24454-181973
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018581	Not1	PF04054.15	3.3e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019157	-	5883	-	ENSEBUP00000018581	1960 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011534	cnot1	86	86.937	ENSG00000125107	CNOT1	100	96.000	Homo_sapiens
ENSEBUG00000011534	cnot1	95	75.893	ENSAPOG00000005042	cnot1	83	75.893	Acanthochromis_polyacanthus
ENSEBUG00000011534	cnot1	95	77.136	ENSAMEG00000017298	CNOT1	81	77.136	Ailuropoda_melanoleuca
ENSEBUG00000011534	cnot1	83	74.256	ENSACIG00000016003	cnot1	79	74.256	Amphilophus_citrinellus
ENSEBUG00000011534	cnot1	95	76.042	ENSAPEG00000022342	cnot1	81	76.042	Amphiprion_percula
ENSEBUG00000011534	cnot1	95	76.042	ENSATEG00000012892	cnot1	83	76.042	Anabas_testudineus
ENSEBUG00000011534	cnot1	95	75.821	ENSAPLG00000007162	CNOT1	81	76.866	Anas_platyrhynchos
ENSEBUG00000011534	cnot1	87	85.714	ENSACAG00000001602	CNOT1	78	85.714	Anolis_carolinensis
ENSEBUG00000011534	cnot1	95	80.519	ENSANAG00000038198	CNOT1	81	80.519	Aotus_nancymaae
ENSEBUG00000011534	cnot1	95	76.042	ENSACLG00000014234	cnot1	83	76.042	Astatotilapia_calliptera
ENSEBUG00000011534	cnot1	95	75.595	ENSAMXG00000013170	cnot1	81	75.595	Astyanax_mexicanus
ENSEBUG00000011534	cnot1	95	76.831	ENSBTAG00000020782	CNOT1	81	76.831	Bos_taurus
ENSEBUG00000011534	cnot1	67	46.717	WBGene00002845	let-711	66	45.294	Caenorhabditis_elegans
ENSEBUG00000011534	cnot1	95	76.831	ENSCJAG00000011318	CNOT1	100	71.091	Callithrix_jacchus
ENSEBUG00000011534	cnot1	95	76.464	ENSCAFG00000008426	CNOT1	81	76.464	Canis_familiaris
ENSEBUG00000011534	cnot1	95	82.372	ENSCAFG00020010156	CNOT1	81	82.372	Canis_lupus_dingo
ENSEBUG00000011534	cnot1	95	76.831	ENSCHIG00000010452	CNOT1	81	76.831	Capra_hircus
ENSEBUG00000011534	cnot1	95	82.372	ENSTSYG00000006888	CNOT1	81	82.372	Carlito_syrichta
ENSEBUG00000011534	cnot1	95	82.372	ENSCPOG00000013026	CNOT1	80	82.372	Cavia_porcellus
ENSEBUG00000011534	cnot1	91	82.372	ENSCCAG00000026333	CNOT1	79	82.372	Cebus_capucinus
ENSEBUG00000011534	cnot1	95	82.372	ENSCATG00000032625	CNOT1	81	82.372	Cercocebus_atys
ENSEBUG00000011534	cnot1	95	76.831	ENSCLAG00000006289	CNOT1	81	76.831	Chinchilla_lanigera
ENSEBUG00000011534	cnot1	95	76.831	ENSCSAG00000004731	CNOT1	81	76.831	Chlorocebus_sabaeus
ENSEBUG00000011534	cnot1	69	90.698	ENSCHOG00000009712	CNOT1	62	90.741	Choloepus_hoffmanni
ENSEBUG00000011534	cnot1	93	82.212	ENSCPBG00000026222	CNOT1	79	82.212	Chrysemys_picta_bellii
ENSEBUG00000011534	cnot1	88	67.704	ENSCING00000009149	-	78	67.704	Ciona_intestinalis
ENSEBUG00000011534	cnot1	85	78.174	ENSCSAVG00000002414	-	79	78.174	Ciona_savignyi
ENSEBUG00000011534	cnot1	95	82.372	ENSCANG00000040534	CNOT1	81	82.372	Colobus_angolensis_palliatus
ENSEBUG00000011534	cnot1	95	82.212	ENSCGRG00001016365	Cnot1	81	82.212	Cricetulus_griseus_chok1gshd
ENSEBUG00000011534	cnot1	95	82.212	ENSCGRG00000001714	Cnot1	81	82.212	Cricetulus_griseus_crigri
ENSEBUG00000011534	cnot1	95	75.893	ENSCVAG00000018930	cnot1	83	75.893	Cyprinodon_variegatus
ENSEBUG00000011534	cnot1	95	75.857	ENSDARG00000004174	cnot1	81	75.857	Danio_rerio
ENSEBUG00000011534	cnot1	95	74.030	ENSDNOG00000013250	CNOT1	81	74.030	Dasypus_novemcinctus
ENSEBUG00000011534	cnot1	90	68.456	FBgn0085436	Not1	78	55.132	Drosophila_melanogaster
ENSEBUG00000011534	cnot1	89	76.006	ENSETEG00000012806	CNOT1	76	76.006	Echinops_telfairi
ENSEBUG00000011534	cnot1	95	76.831	ENSEASG00005005819	CNOT1	83	76.036	Equus_asinus_asinus
ENSEBUG00000011534	cnot1	95	76.831	ENSECAG00000009889	CNOT1	83	76.831	Equus_caballus
ENSEBUG00000011534	cnot1	82	76.506	ENSEEUG00000006015	CNOT1	71	76.506	Erinaceus_europaeus
ENSEBUG00000011534	cnot1	95	74.112	ENSELUG00000014085	cnot1	81	74.600	Esox_lucius
ENSEBUG00000011534	cnot1	95	76.579	ENSFCAG00000025155	CNOT1	81	76.579	Felis_catus
ENSEBUG00000011534	cnot1	95	77.130	ENSFALG00000007285	CNOT1	81	77.130	Ficedula_albicollis
ENSEBUG00000011534	cnot1	95	82.372	ENSFDAG00000013399	CNOT1	81	82.372	Fukomys_damarensis
ENSEBUG00000011534	cnot1	95	76.042	ENSFHEG00000020574	cnot1	81	76.042	Fundulus_heteroclitus
ENSEBUG00000011534	cnot1	86	85.135	ENSGMOG00000012864	cnot1	79	85.135	Gadus_morhua
ENSEBUG00000011534	cnot1	95	76.831	ENSGALG00000002301	CNOT1	81	76.831	Gallus_gallus
ENSEBUG00000011534	cnot1	95	75.893	ENSGAFG00000015005	cnot1	81	75.893	Gambusia_affinis
ENSEBUG00000011534	cnot1	86	85.393	ENSGACG00000002606	cnot1	79	85.393	Gasterosteus_aculeatus
ENSEBUG00000011534	cnot1	95	76.682	ENSGAGG00000022646	CNOT1	86	76.682	Gopherus_agassizii
ENSEBUG00000011534	cnot1	95	76.831	ENSGGOG00000009547	CNOT1	81	76.831	Gorilla_gorilla
ENSEBUG00000011534	cnot1	95	76.042	ENSHBUG00000001729	cnot1	83	76.042	Haplochromis_burtoni
ENSEBUG00000011534	cnot1	95	82.372	ENSHGLG00000014322	CNOT1	81	82.372	Heterocephalus_glaber_female
ENSEBUG00000011534	cnot1	95	75.334	ENSHCOG00000006501	cnot1	81	75.334	Hippocampus_comes
ENSEBUG00000011534	cnot1	95	74.374	ENSIPUG00000011915	cnot1	81	74.374	Ictalurus_punctatus
ENSEBUG00000011534	cnot1	95	82.372	ENSSTOG00000005490	CNOT1	81	82.372	Ictidomys_tridecemlineatus
ENSEBUG00000011534	cnot1	95	81.731	ENSJJAG00000000633	Cnot1	81	81.731	Jaculus_jaculus
ENSEBUG00000011534	cnot1	95	76.042	ENSKMAG00000006149	cnot1	81	76.042	Kryptolebias_marmoratus
ENSEBUG00000011534	cnot1	91	73.715	ENSLBEG00000004740	cnot1	80	74.018	Labrus_bergylta
ENSEBUG00000011534	cnot1	95	76.637	ENSLACG00000010869	CNOT1	82	76.637	Latimeria_chalumnae
ENSEBUG00000011534	cnot1	95	76.042	ENSLOCG00000006324	cnot1	81	76.042	Lepisosteus_oculatus
ENSEBUG00000011534	cnot1	95	76.693	ENSLAFG00000000098	CNOT1	81	76.693	Loxodonta_africana
ENSEBUG00000011534	cnot1	95	82.372	ENSMFAG00000035888	CNOT1	81	82.372	Macaca_fascicularis
ENSEBUG00000011534	cnot1	95	82.372	ENSMMUG00000014625	CNOT1	94	80.727	Macaca_mulatta
ENSEBUG00000011534	cnot1	95	82.372	ENSMNEG00000031820	CNOT1	80	82.372	Macaca_nemestrina
ENSEBUG00000011534	cnot1	95	78.045	ENSMLEG00000040933	CNOT1	81	78.045	Mandrillus_leucophaeus
ENSEBUG00000011534	cnot1	95	74.554	ENSMAMG00000016524	cnot1	80	74.554	Mastacembelus_armatus
ENSEBUG00000011534	cnot1	95	76.042	ENSMZEG00005016210	cnot1	83	76.042	Maylandia_zebra
ENSEBUG00000011534	cnot1	95	76.831	ENSMGAG00000001908	CNOT1	81	76.831	Meleagris_gallopavo
ENSEBUG00000011534	cnot1	95	82.372	ENSMICG00000007071	CNOT1	81	82.372	Microcebus_murinus
ENSEBUG00000011534	cnot1	95	82.212	ENSMOCG00000017969	Cnot1	81	82.212	Microtus_ochrogaster
ENSEBUG00000011534	cnot1	95	75.058	ENSMMOG00000019134	cnot1	83	75.751	Mola_mola
ENSEBUG00000011534	cnot1	95	76.464	ENSMODG00000014199	CNOT1	81	76.716	Monodelphis_domestica
ENSEBUG00000011534	cnot1	95	76.042	ENSMALG00000008645	cnot1	81	76.042	Monopterus_albus
ENSEBUG00000011534	cnot1	88	87.619	MGP_CAROLIEiJ_G0031430	Cnot1	73	87.619	Mus_caroli
ENSEBUG00000011534	cnot1	95	82.212	ENSMUSG00000036550	Cnot1	81	82.212	Mus_musculus
ENSEBUG00000011534	cnot1	95	82.212	MGP_PahariEiJ_G0023028	Cnot1	81	82.212	Mus_pahari
ENSEBUG00000011534	cnot1	95	82.212	MGP_SPRETEiJ_G0032549	Cnot1	81	82.212	Mus_spretus
ENSEBUG00000011534	cnot1	95	76.831	ENSMPUG00000004830	CNOT1	81	76.831	Mustela_putorius_furo
ENSEBUG00000011534	cnot1	95	76.682	ENSMLUG00000003728	CNOT1	81	76.682	Myotis_lucifugus
ENSEBUG00000011534	cnot1	95	82.372	ENSNGAG00000018628	Cnot1	81	82.372	Nannospalax_galili
ENSEBUG00000011534	cnot1	90	71.940	ENSNBRG00000019358	cnot1	86	71.940	Neolamprologus_brichardi
ENSEBUG00000011534	cnot1	95	82.372	ENSNLEG00000003566	CNOT1	81	82.372	Nomascus_leucogenys
ENSEBUG00000011534	cnot1	84	79.861	ENSMEUG00000006145	CNOT1	71	79.861	Notamacropus_eugenii
ENSEBUG00000011534	cnot1	74	88.350	ENSOPRG00000005604	CNOT1	63	88.350	Ochotona_princeps
ENSEBUG00000011534	cnot1	95	82.372	ENSODEG00000016337	CNOT1	81	82.372	Octodon_degus
ENSEBUG00000011534	cnot1	95	76.042	ENSONIG00000007358	cnot1	81	76.042	Oreochromis_niloticus
ENSEBUG00000011534	cnot1	87	86.607	ENSOANG00000012109	CNOT1	79	86.607	Ornithorhynchus_anatinus
ENSEBUG00000011534	cnot1	95	76.831	ENSOCUG00000006911	CNOT1	81	76.831	Oryctolagus_cuniculus
ENSEBUG00000011534	cnot1	95	75.744	ENSORLG00000013734	cnot1	81	75.744	Oryzias_latipes
ENSEBUG00000011534	cnot1	95	81.180	ENSORLG00020017012	cnot1	81	81.180	Oryzias_latipes_hni
ENSEBUG00000011534	cnot1	95	81.180	ENSORLG00015007091	cnot1	81	81.180	Oryzias_latipes_hsok
ENSEBUG00000011534	cnot1	95	81.180	ENSOMEG00000015124	cnot1	81	81.180	Oryzias_melastigma
ENSEBUG00000011534	cnot1	95	76.831	ENSOGAG00000000543	CNOT1	81	76.831	Otolemur_garnettii
ENSEBUG00000011534	cnot1	95	76.831	ENSOARG00000001567	CNOT1	81	76.831	Ovis_aries
ENSEBUG00000011534	cnot1	95	82.372	ENSPPAG00000022013	CNOT1	81	82.372	Pan_paniscus
ENSEBUG00000011534	cnot1	95	76.831	ENSPPRG00000004867	CNOT1	81	76.831	Panthera_pardus
ENSEBUG00000011534	cnot1	95	76.831	ENSPTIG00000012589	CNOT1	81	76.831	Panthera_tigris_altaica
ENSEBUG00000011534	cnot1	95	82.372	ENSPTRG00000008183	CNOT1	81	82.372	Pan_troglodytes
ENSEBUG00000011534	cnot1	95	82.372	ENSPANG00000020901	CNOT1	81	82.372	Papio_anubis
ENSEBUG00000011534	cnot1	95	74.737	ENSPKIG00000002914	CNOT1	83	74.737	Paramormyrops_kingsleyae
ENSEBUG00000011534	cnot1	95	76.383	ENSPKIG00000023538	CNOT1	81	76.383	Paramormyrops_kingsleyae
ENSEBUG00000011534	cnot1	95	76.532	ENSPSIG00000005499	CNOT1	81	76.532	Pelodiscus_sinensis
ENSEBUG00000011534	cnot1	95	84.740	ENSPMAG00000009381	cnot1	81	84.740	Petromyzon_marinus
ENSEBUG00000011534	cnot1	95	82.372	ENSPCIG00000007343	CNOT1	81	82.372	Phascolarctos_cinereus
ENSEBUG00000011534	cnot1	94	80.960	ENSPFOG00000003497	cnot1	79	80.960	Poecilia_formosa
ENSEBUG00000011534	cnot1	91	73.715	ENSPLAG00000014018	cnot1	80	73.715	Poecilia_latipinna
ENSEBUG00000011534	cnot1	91	73.715	ENSPMEG00000005868	cnot1	80	73.715	Poecilia_mexicana
ENSEBUG00000011534	cnot1	91	73.715	ENSPREG00000018793	cnot1	80	73.715	Poecilia_reticulata
ENSEBUG00000011534	cnot1	95	76.831	ENSPPYG00000007410	CNOT1	81	76.831	Pongo_abelii
ENSEBUG00000011534	cnot1	81	82.653	ENSPCAG00000003241	CNOT1	70	82.653	Procavia_capensis
ENSEBUG00000011534	cnot1	95	82.372	ENSPCOG00000027139	CNOT1	81	82.372	Propithecus_coquereli
ENSEBUG00000011534	cnot1	95	76.234	ENSPVAG00000004243	CNOT1	81	76.234	Pteropus_vampyrus
ENSEBUG00000011534	cnot1	95	76.042	ENSPNYG00000012919	cnot1	83	76.042	Pundamilia_nyererei
ENSEBUG00000011534	cnot1	95	75.595	ENSPNAG00000000246	cnot1	81	75.595	Pygocentrus_nattereri
ENSEBUG00000011534	cnot1	95	76.682	ENSRNOG00000012271	Cnot1	81	76.682	Rattus_norvegicus
ENSEBUG00000011534	cnot1	95	82.372	ENSRBIG00000044598	CNOT1	81	82.372	Rhinopithecus_bieti
ENSEBUG00000011534	cnot1	95	82.372	ENSRROG00000000906	CNOT1	81	82.372	Rhinopithecus_roxellana
ENSEBUG00000011534	cnot1	95	78.095	ENSSBOG00000029155	CNOT1	80	78.095	Saimiri_boliviensis_boliviensis
ENSEBUG00000011534	cnot1	95	76.923	ENSSHAG00000012187	CNOT1	81	76.923	Sarcophilus_harrisii
ENSEBUG00000011534	cnot1	95	81.672	ENSSFOG00015017614	cnot1	81	81.672	Scleropages_formosus
ENSEBUG00000011534	cnot1	95	76.042	ENSSMAG00000013844	cnot1	79	82.403	Scophthalmus_maximus
ENSEBUG00000011534	cnot1	95	76.190	ENSSDUG00000021491	cnot1	83	76.190	Seriola_dumerili
ENSEBUG00000011534	cnot1	95	76.190	ENSSLDG00000014816	cnot1	83	76.190	Seriola_lalandi_dorsalis
ENSEBUG00000011534	cnot1	85	82.000	ENSSARG00000000762	CNOT1	74	82.000	Sorex_araneus
ENSEBUG00000011534	cnot1	95	76.042	ENSSPAG00000018802	cnot1	81	76.042	Stegastes_partitus
ENSEBUG00000011534	cnot1	95	77.136	ENSSSCG00000002799	CNOT1	83	77.136	Sus_scrofa
ENSEBUG00000011534	cnot1	95	77.130	ENSTGUG00000005919	CNOT1	81	77.130	Taeniopygia_guttata
ENSEBUG00000011534	cnot1	95	75.744	ENSTNIG00000018706	cnot1	82	75.744	Tetraodon_nigroviridis
ENSEBUG00000011534	cnot1	76	75.785	ENSTBEG00000000720	CNOT1	65	75.785	Tupaia_belangeri
ENSEBUG00000011534	cnot1	89	76.831	ENSTTRG00000008460	CNOT1	76	76.831	Tursiops_truncatus
ENSEBUG00000011534	cnot1	95	76.831	ENSUAMG00000009251	CNOT1	81	76.831	Ursus_americanus
ENSEBUG00000011534	cnot1	95	76.831	ENSUMAG00000021291	CNOT1	81	76.831	Ursus_maritimus
ENSEBUG00000011534	cnot1	90	76.599	ENSVPAG00000008846	CNOT1	77	76.599	Vicugna_pacos
ENSEBUG00000011534	cnot1	95	82.372	ENSVVUG00000024037	CNOT1	81	82.372	Vulpes_vulpes
ENSEBUG00000011534	cnot1	93	76.471	ENSXETG00000015900	cnot1	79	76.471	Xenopus_tropicalis
ENSEBUG00000011534	cnot1	95	75.893	ENSXCOG00000013552	cnot1	81	75.893	Xiphophorus_couchianus
ENSEBUG00000011534	cnot1	95	75.893	ENSXMAG00000006031	cnot1	81	75.893	Xiphophorus_maculatus