EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011586 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 36923 bases
Position: chrFYBX02009637.1:1028794-1065716
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018557	CPL	PF08144.11	6.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019134	-	4800	-	ENSEBUP00000018557	664 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011586	pum3	76	41.176	ENSG00000080608	PUM3	80	40.454	Homo_sapiens
ENSEBUG00000011586	pum3	90	37.948	ENSAPOG00000020252	pum3	82	39.227	Acanthochromis_polyacanthus
ENSEBUG00000011586	pum3	76	41.406	ENSAMEG00000012187	PUM3	81	40.832	Ailuropoda_melanoleuca
ENSEBUG00000011586	pum3	81	36.929	ENSACIG00000009786	pum3	89	36.929	Amphilophus_citrinellus
ENSEBUG00000011586	pum3	90	37.724	ENSAOCG00000004439	pum3	82	39.411	Amphiprion_ocellaris
ENSEBUG00000011586	pum3	90	37.724	ENSAPEG00000020523	pum3	82	39.411	Amphiprion_percula
ENSEBUG00000011586	pum3	80	39.815	ENSATEG00000005799	pum3	82	39.815	Anabas_testudineus
ENSEBUG00000011586	pum3	75	43.478	ENSAPLG00000002920	PUM3	83	42.667	Anas_platyrhynchos
ENSEBUG00000011586	pum3	71	41.494	ENSACAG00000003174	PUM3	83	40.873	Anolis_carolinensis
ENSEBUG00000011586	pum3	76	41.569	ENSANAG00000024520	PUM3	81	40.832	Aotus_nancymaae
ENSEBUG00000011586	pum3	85	37.627	ENSACLG00000001017	pum3	84	38.309	Astatotilapia_calliptera
ENSEBUG00000011586	pum3	78	41.573	ENSAMXG00000020911	pum3	83	41.573	Astyanax_mexicanus
ENSEBUG00000011586	pum3	75	41.188	ENSBTAG00000013357	PUM3	80	40.458	Bos_taurus
ENSEBUG00000011586	pum3	76	41.176	ENSCJAG00000010917	PUM3	81	40.454	Callithrix_jacchus
ENSEBUG00000011586	pum3	75	40.792	ENSCAFG00000002035	PUM3	80	40.076	Canis_familiaris
ENSEBUG00000011586	pum3	75	40.792	ENSCAFG00020026867	PUM3	80	40.076	Canis_lupus_dingo
ENSEBUG00000011586	pum3	75	41.454	ENSCHIG00000021559	PUM3	80	40.720	Capra_hircus
ENSEBUG00000011586	pum3	75	40.792	ENSTSYG00000007481	PUM3	80	40.076	Carlito_syrichta
ENSEBUG00000011586	pum3	75	40.354	ENSCAPG00000010592	-	80	39.658	Cavia_aperea
ENSEBUG00000011586	pum3	77	40.684	ENSCPOG00000008552	-	80	40.684	Cavia_porcellus
ENSEBUG00000011586	pum3	76	41.440	ENSCCAG00000032650	PUM3	81	40.713	Cebus_capucinus
ENSEBUG00000011586	pum3	76	40.820	ENSCATG00000024880	PUM3	81	40.113	Cercocebus_atys
ENSEBUG00000011586	pum3	75	41.386	ENSCLAG00000011892	PUM3	80	40.649	Chinchilla_lanigera
ENSEBUG00000011586	pum3	76	41.257	ENSCSAG00000008691	PUM3	81	40.454	Chlorocebus_sabaeus
ENSEBUG00000011586	pum3	61	37.349	ENSCHOG00000002535	PUM3	59	37.349	Choloepus_hoffmanni
ENSEBUG00000011586	pum3	75	41.782	ENSCPBG00000025470	PUM3	77	41.031	Chrysemys_picta_bellii
ENSEBUG00000011586	pum3	75	36.452	ENSCING00000024199	-	88	36.759	Ciona_intestinalis
ENSEBUG00000011586	pum3	76	36.207	ENSCSAVG00000006072	-	92	36.473	Ciona_savignyi
ENSEBUG00000011586	pum3	76	41.176	ENSCANG00000006142	PUM3	81	40.454	Colobus_angolensis_palliatus
ENSEBUG00000011586	pum3	76	41.797	ENSCGRG00001016402	Pum3	80	41.055	Cricetulus_griseus_chok1gshd
ENSEBUG00000011586	pum3	76	41.797	ENSCGRG00000010207	Pum3	80	41.055	Cricetulus_griseus_crigri
ENSEBUG00000011586	pum3	72	39.583	ENSCSEG00000001565	pum3	78	40.173	Cynoglossus_semilaevis
ENSEBUG00000011586	pum3	78	41.698	ENSDARG00000087779	pum3	83	41.698	Danio_rerio
ENSEBUG00000011586	pum3	75	38.020	ENSDNOG00000008157	PUM3	55	37.405	Dasypus_novemcinctus
ENSEBUG00000011586	pum3	76	42.023	ENSETEG00000015331	PUM3	78	42.023	Echinops_telfairi
ENSEBUG00000011586	pum3	76	41.569	ENSEASG00005010350	PUM3	81	40.832	Equus_asinus_asinus
ENSEBUG00000011586	pum3	76	41.569	ENSECAG00000017193	PUM3	81	40.832	Equus_caballus
ENSEBUG00000011586	pum3	71	34.719	ENSEEUG00000010314	PUM3	78	34.845	Erinaceus_europaeus
ENSEBUG00000011586	pum3	80	40.367	ENSELUG00000002215	pum3	82	40.367	Esox_lucius
ENSEBUG00000011586	pum3	78	42.095	ENSFALG00000010509	PUM3	81	42.095	Ficedula_albicollis
ENSEBUG00000011586	pum3	75	40.792	ENSFDAG00000021027	PUM3	80	40.076	Fukomys_damarensis
ENSEBUG00000011586	pum3	55	41.287	ENSFHEG00000015576	pum3	65	42.450	Fundulus_heteroclitus
ENSEBUG00000011586	pum3	78	39.434	ENSGMOG00000014217	pum3	96	39.434	Gadus_morhua
ENSEBUG00000011586	pum3	75	43.083	ENSGALG00000010178	PUM3	81	42.286	Gallus_gallus
ENSEBUG00000011586	pum3	50	43.068	ENSGAFG00000001930	pum3	57	43.023	Gambusia_affinis
ENSEBUG00000011586	pum3	77	40.154	ENSGACG00000017878	pum3	92	40.154	Gasterosteus_aculeatus
ENSEBUG00000011586	pum3	75	41.897	ENSGAGG00000018983	PUM3	83	41.143	Gopherus_agassizii
ENSEBUG00000011586	pum3	76	41.176	ENSGGOG00000006143	PUM3	81	40.454	Gorilla_gorilla
ENSEBUG00000011586	pum3	73	35.020	ENSHBUG00000012903	pum3	77	35.010	Haplochromis_burtoni
ENSEBUG00000011586	pum3	75	41.188	ENSHGLG00000015868	-	80	40.530	Heterocephalus_glaber_female
ENSEBUG00000011586	pum3	75	41.188	ENSHGLG00100018825	PUM3	80	40.530	Heterocephalus_glaber_male
ENSEBUG00000011586	pum3	80	39.154	ENSHCOG00000010306	pum3	77	39.544	Hippocampus_comes
ENSEBUG00000011586	pum3	78	41.463	ENSIPUG00000024801	pum3	83	41.463	Ictalurus_punctatus
ENSEBUG00000011586	pum3	75	41.584	ENSSTOG00000009586	PUM3	80	40.840	Ictidomys_tridecemlineatus
ENSEBUG00000011586	pum3	78	40.762	ENSJJAG00000012563	Pum3	79	40.762	Jaculus_jaculus
ENSEBUG00000011586	pum3	85	38.765	ENSKMAG00000010277	pum3	82	40.820	Kryptolebias_marmoratus
ENSEBUG00000011586	pum3	75	39.412	ENSLBEG00000012213	pum3	76	39.412	Labrus_bergylta
ENSEBUG00000011586	pum3	75	39.723	ENSLACG00000008312	PUM3	81	39.400	Latimeria_chalumnae
ENSEBUG00000011586	pum3	78	42.642	ENSLOCG00000012529	pum3	79	43.590	Lepisosteus_oculatus
ENSEBUG00000011586	pum3	75	41.304	ENSLAFG00000017341	PUM3	80	40.571	Loxodonta_africana
ENSEBUG00000011586	pum3	76	41.176	ENSMFAG00000001430	PUM3	81	40.454	Macaca_fascicularis
ENSEBUG00000011586	pum3	76	41.176	ENSMMUG00000002362	PUM3	79	40.454	Macaca_mulatta
ENSEBUG00000011586	pum3	76	41.176	ENSMNEG00000035288	PUM3	81	40.454	Macaca_nemestrina
ENSEBUG00000011586	pum3	76	41.016	ENSMLEG00000034820	PUM3	81	40.301	Mandrillus_leucophaeus
ENSEBUG00000011586	pum3	80	38.078	ENSMAMG00000022861	pum3	82	38.078	Mastacembelus_armatus
ENSEBUG00000011586	pum3	85	37.755	ENSMZEG00005014205	pum3	79	39.098	Maylandia_zebra
ENSEBUG00000011586	pum3	75	38.583	ENSMGAG00000002255	PUM3	86	38.767	Meleagris_gallopavo
ENSEBUG00000011586	pum3	76	41.992	ENSMAUG00000009733	Pum3	80	41.243	Mesocricetus_auratus
ENSEBUG00000011586	pum3	75	41.188	ENSMICG00000045916	PUM3	69	40.458	Microcebus_murinus
ENSEBUG00000011586	pum3	76	41.992	ENSMOCG00000019519	-	80	41.243	Microtus_ochrogaster
ENSEBUG00000011586	pum3	92	37.342	ENSMOCG00000014830	-	82	39.962	Microtus_ochrogaster
ENSEBUG00000011586	pum3	89	33.723	ENSMMOG00000012184	pum3	82	36.207	Mola_mola
ENSEBUG00000011586	pum3	81	41.133	ENSMODG00000015417	PUM3	72	42.045	Monodelphis_domestica
ENSEBUG00000011586	pum3	80	38.404	ENSMALG00000022164	pum3	79	38.404	Monopterus_albus
ENSEBUG00000011586	pum3	76	41.829	MGP_CAROLIEiJ_G0022845	Pum3	80	41.088	Mus_caroli
ENSEBUG00000011586	pum3	76	42.023	ENSMUSG00000041360	Pum3	80	41.276	Mus_musculus
ENSEBUG00000011586	pum3	76	41.373	MGP_PahariEiJ_G0014338	Pum3	80	40.643	Mus_pahari
ENSEBUG00000011586	pum3	76	42.218	MGP_SPRETEiJ_G0023763	Pum3	80	41.463	Mus_spretus
ENSEBUG00000011586	pum3	78	40.341	ENSMPUG00000005125	PUM3	80	40.341	Mustela_putorius_furo
ENSEBUG00000011586	pum3	76	40.980	ENSMLUG00000002309	PUM3	77	41.051	Myotis_lucifugus
ENSEBUG00000011586	pum3	76	38.748	ENSNGAG00000019468	Pum3	81	38.158	Nannospalax_galili
ENSEBUG00000011586	pum3	75	37.052	ENSNBRG00000021370	pum3	77	36.853	Neolamprologus_brichardi
ENSEBUG00000011586	pum3	76	41.176	ENSNLEG00000008712	PUM3	81	40.454	Nomascus_leucogenys
ENSEBUG00000011586	pum3	50	33.433	ENSOPRG00000004225	-	52	33.628	Ochotona_princeps
ENSEBUG00000011586	pum3	88	35.552	ENSODEG00000016477	-	79	38.432	Octodon_degus
ENSEBUG00000011586	pum3	75	41.107	ENSODEG00000003625	-	86	38.938	Octodon_degus
ENSEBUG00000011586	pum3	87	37.124	ENSONIG00000012733	pum3	82	38.078	Oreochromis_niloticus
ENSEBUG00000011586	pum3	81	39.201	ENSOANG00000014995	PUM3	90	41.235	Ornithorhynchus_anatinus
ENSEBUG00000011586	pum3	75	40.792	ENSOCUG00000026104	-	80	40.076	Oryctolagus_cuniculus
ENSEBUG00000011586	pum3	75	41.188	ENSOCUG00000004189	-	80	40.458	Oryctolagus_cuniculus
ENSEBUG00000011586	pum3	89	39.901	ENSORLG00000014935	pum3	84	41.081	Oryzias_latipes
ENSEBUG00000011586	pum3	86	40.206	ENSORLG00020002841	pum3	84	41.081	Oryzias_latipes_hni
ENSEBUG00000011586	pum3	89	39.901	ENSORLG00015015906	pum3	86	40.514	Oryzias_latipes_hsok
ENSEBUG00000011586	pum3	87	40.000	ENSOMEG00000009427	pum3	84	41.123	Oryzias_melastigma
ENSEBUG00000011586	pum3	75	34.570	ENSOGAG00000033481	-	81	33.835	Otolemur_garnettii
ENSEBUG00000011586	pum3	75	42.633	ENSOGAG00000008125	-	80	41.856	Otolemur_garnettii
ENSEBUG00000011586	pum3	75	41.257	ENSOARG00000013337	PUM3	80	40.530	Ovis_aries
ENSEBUG00000011586	pum3	76	40.980	ENSPPAG00000041337	PUM3	80	40.265	Pan_paniscus
ENSEBUG00000011586	pum3	75	40.990	ENSPPRG00000000809	PUM3	80	40.267	Panthera_pardus
ENSEBUG00000011586	pum3	75	41.188	ENSPTIG00000021934	PUM3	80	40.267	Panthera_tigris_altaica
ENSEBUG00000011586	pum3	76	41.176	ENSPTRG00000020735	PUM3	80	40.454	Pan_troglodytes
ENSEBUG00000011586	pum3	76	41.176	ENSPANG00000025118	PUM3	81	40.454	Papio_anubis
ENSEBUG00000011586	pum3	78	41.635	ENSPKIG00000022249	pum3	84	39.658	Paramormyrops_kingsleyae
ENSEBUG00000011586	pum3	75	43.083	ENSPSIG00000016272	PUM3	81	42.286	Pelodiscus_sinensis
ENSEBUG00000011586	pum3	71	41.286	ENSPMGG00000021261	pum3	94	41.286	Periophthalmus_magnuspinnatus
ENSEBUG00000011586	pum3	67	43.564	ENSPEMG00000019340	-	77	35.484	Peromyscus_maniculatus_bairdii
ENSEBUG00000011586	pum3	75	42.801	ENSPCIG00000030598	PUM3	66	42.801	Phascolarctos_cinereus
ENSEBUG00000011586	pum3	78	39.811	ENSPFOG00000001719	pum3	86	39.811	Poecilia_formosa
ENSEBUG00000011586	pum3	75	40.864	ENSPLAG00000020010	pum3	82	39.513	Poecilia_latipinna
ENSEBUG00000011586	pum3	75	40.864	ENSPMEG00000017451	pum3	82	39.513	Poecilia_mexicana
ENSEBUG00000011586	pum3	76	41.373	ENSPPYG00000019255	PUM3	81	40.643	Pongo_abelii
ENSEBUG00000011586	pum3	75	37.426	ENSPCAG00000005797	PUM3	73	37.426	Procavia_capensis
ENSEBUG00000011586	pum3	75	41.386	ENSPCOG00000027325	PUM3	80	40.649	Propithecus_coquereli
ENSEBUG00000011586	pum3	75	41.487	ENSPVAG00000016135	PUM3	73	41.487	Pteropus_vampyrus
ENSEBUG00000011586	pum3	85	37.797	ENSPNYG00000016124	pum3	84	38.489	Pundamilia_nyererei
ENSEBUG00000011586	pum3	77	40.848	ENSPNAG00000026524	pum3	82	41.065	Pygocentrus_nattereri
ENSEBUG00000011586	pum3	76	41.440	ENSRNOG00000048356	RGD1308750	81	40.713	Rattus_norvegicus
ENSEBUG00000011586	pum3	76	41.634	ENSRNOG00000012574	Pum3	81	40.901	Rattus_norvegicus
ENSEBUG00000011586	pum3	76	40.980	ENSRBIG00000036924	PUM3	81	40.265	Rhinopithecus_bieti
ENSEBUG00000011586	pum3	76	41.176	ENSRROG00000041089	PUM3	81	40.454	Rhinopithecus_roxellana
ENSEBUG00000011586	pum3	76	42.074	ENSSBOG00000028066	PUM3	81	41.321	Saimiri_boliviensis_boliviensis
ENSEBUG00000011586	pum3	76	41.520	ENSSHAG00000003730	PUM3	81	40.748	Sarcophilus_harrisii
ENSEBUG00000011586	pum3	78	41.021	ENSSFOG00015018778	pum3	81	41.021	Scleropages_formosus
ENSEBUG00000011586	pum3	77	39.544	ENSSMAG00000013236	pum3	79	39.544	Scophthalmus_maximus
ENSEBUG00000011586	pum3	87	37.563	ENSSDUG00000001887	pum3	80	38.645	Seriola_dumerili
ENSEBUG00000011586	pum3	87	37.563	ENSSLDG00000015766	pum3	81	38.645	Seriola_lalandi_dorsalis
ENSEBUG00000011586	pum3	75	38.507	ENSSARG00000000579	PUM3	84	37.879	Sorex_araneus
ENSEBUG00000011586	pum3	76	40.430	ENSSPUG00000001707	PUM3	80	40.430	Sphenodon_punctatus
ENSEBUG00000011586	pum3	85	38.095	ENSSPAG00000003976	pum3	82	39.002	Stegastes_partitus
ENSEBUG00000011586	pum3	75	41.061	ENSSSCG00000005227	PUM3	80	40.341	Sus_scrofa
ENSEBUG00000011586	pum3	75	42.292	ENSTGUG00000005339	PUM3	81	41.714	Taeniopygia_guttata
ENSEBUG00000011586	pum3	78	40.377	ENSTRUG00000004074	pum3	78	40.377	Takifugu_rubripes
ENSEBUG00000011586	pum3	78	41.321	ENSTNIG00000010325	pum3	83	41.165	Tetraodon_nigroviridis
ENSEBUG00000011586	pum3	75	31.102	ENSTBEG00000013058	PUM3	80	30.740	Tupaia_belangeri
ENSEBUG00000011586	pum3	75	36.238	ENSTTRG00000001062	PUM3	77	35.687	Tursiops_truncatus
ENSEBUG00000011586	pum3	76	39.726	ENSUMAG00000018443	PUM3	94	39.726	Ursus_maritimus
ENSEBUG00000011586	pum3	75	41.176	ENSVPAG00000010766	PUM3	79	40.454	Vicugna_pacos
ENSEBUG00000011586	pum3	75	40.909	ENSVVUG00000006527	PUM3	80	40.190	Vulpes_vulpes
ENSEBUG00000011586	pum3	77	37.645	ENSXETG00000011707	pum3	74	38.272	Xenopus_tropicalis
ENSEBUG00000011586	pum3	79	38.007	ENSXCOG00000006725	pum3	87	38.007	Xiphophorus_couchianus
ENSEBUG00000011586	pum3	79	39.556	ENSXMAG00000002926	pum3	82	39.556	Xiphophorus_maculatus