EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011648 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 9350 bases
Position: chrFYBX02009565.1:3297462-3306811
Accession: ZDB-GENE-030131-5306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018654	Clp1	PF06807.14	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019230	-	4747	-	ENSEBUP00000018654	425 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011648	clp1	97	72.155	ENSG00000172409	CLP1	97	72.155	Homo_sapiens
ENSEBUG00000011648	clp1	98	65.493	ENSAPOG00000008242	clp1	96	65.493	Acanthochromis_polyacanthus
ENSEBUG00000011648	clp1	97	72.397	ENSAMEG00000014551	CLP1	95	72.397	Ailuropoda_melanoleuca
ENSEBUG00000011648	clp1	99	64.637	ENSACIG00000006310	clp1	96	64.637	Amphilophus_citrinellus
ENSEBUG00000011648	clp1	99	65.187	ENSAOCG00000010681	clp1	99	65.187	Amphiprion_ocellaris
ENSEBUG00000011648	clp1	98	65.493	ENSAPEG00000012165	clp1	99	65.493	Amphiprion_percula
ENSEBUG00000011648	clp1	99	65.197	ENSATEG00000012374	clp1	98	65.197	Anabas_testudineus
ENSEBUG00000011648	clp1	98	72.530	ENSACAG00000007139	CLP1	97	72.530	Anolis_carolinensis
ENSEBUG00000011648	clp1	97	72.155	ENSANAG00000034935	CLP1	97	72.155	Aotus_nancymaae
ENSEBUG00000011648	clp1	99	64.269	ENSACLG00000013573	clp1	98	64.269	Astatotilapia_calliptera
ENSEBUG00000011648	clp1	97	67.696	ENSAMXG00000014194	clp1	97	67.696	Astyanax_mexicanus
ENSEBUG00000011648	clp1	97	72.397	ENSBTAG00000006493	CLP1	97	72.397	Bos_taurus
ENSEBUG00000011648	clp1	98	43.230	WBGene00010304	clpf-1	98	43.230	Caenorhabditis_elegans
ENSEBUG00000011648	clp1	97	72.155	ENSCJAG00000008748	CLP1	97	72.155	Callithrix_jacchus
ENSEBUG00000011648	clp1	97	72.397	ENSCAFG00000007815	CLP1	97	72.397	Canis_familiaris
ENSEBUG00000011648	clp1	97	72.397	ENSCAFG00020000903	CLP1	97	72.397	Canis_lupus_dingo
ENSEBUG00000011648	clp1	97	72.155	ENSCHIG00000023497	CLP1	97	72.155	Capra_hircus
ENSEBUG00000011648	clp1	97	72.155	ENSTSYG00000006824	CLP1	96	72.155	Carlito_syrichta
ENSEBUG00000011648	clp1	100	70.588	ENSCAPG00000009703	CLP1	100	70.588	Cavia_aperea
ENSEBUG00000011648	clp1	98	71.703	ENSCPOG00000012554	CLP1	99	71.703	Cavia_porcellus
ENSEBUG00000011648	clp1	97	71.913	ENSCCAG00000031957	CLP1	97	71.913	Cebus_capucinus
ENSEBUG00000011648	clp1	97	72.155	ENSCATG00000044628	CLP1	97	72.155	Cercocebus_atys
ENSEBUG00000011648	clp1	97	72.155	ENSCLAG00000004094	CLP1	97	72.155	Chinchilla_lanigera
ENSEBUG00000011648	clp1	97	72.155	ENSCSAG00000005994	CLP1	97	72.155	Chlorocebus_sabaeus
ENSEBUG00000011648	clp1	99	72.706	ENSCPBG00000016843	CLP1	99	72.706	Chrysemys_picta_bellii
ENSEBUG00000011648	clp1	97	57.729	ENSCING00000003779	-	96	57.729	Ciona_intestinalis
ENSEBUG00000011648	clp1	97	59.420	ENSCSAVG00000003437	-	97	59.420	Ciona_savignyi
ENSEBUG00000011648	clp1	97	72.155	ENSCANG00000034335	CLP1	97	72.155	Colobus_angolensis_palliatus
ENSEBUG00000011648	clp1	97	72.155	ENSCGRG00001002227	CLP1	97	72.155	Cricetulus_griseus_chok1gshd
ENSEBUG00000011648	clp1	97	72.155	ENSCGRG00000004328	CLP1	97	72.155	Cricetulus_griseus_crigri
ENSEBUG00000011648	clp1	99	64.733	ENSCSEG00000008614	clp1	98	64.733	Cynoglossus_semilaevis
ENSEBUG00000011648	clp1	99	64.965	ENSCVAG00000020101	clp1	98	64.965	Cyprinodon_variegatus
ENSEBUG00000011648	clp1	97	66.826	ENSDARG00000063663	clp1	97	65.661	Danio_rerio
ENSEBUG00000011648	clp1	97	72.330	ENSDNOG00000042415	CLP1	87	72.330	Dasypus_novemcinctus
ENSEBUG00000011648	clp1	97	72.397	ENSDORG00000014685	Clp1	97	72.397	Dipodomys_ordii
ENSEBUG00000011648	clp1	97	52.771	FBgn0033842	cbc	98	52.771	Drosophila_melanogaster
ENSEBUG00000011648	clp1	97	72.155	ENSETEG00000003009	CLP1	97	72.155	Echinops_telfairi
ENSEBUG00000011648	clp1	97	72.155	ENSEASG00005002093	CLP1	97	72.155	Equus_asinus_asinus
ENSEBUG00000011648	clp1	97	72.155	ENSECAG00000011597	CLP1	97	72.155	Equus_caballus
ENSEBUG00000011648	clp1	97	72.397	ENSEEUG00000012771	CLP1	97	72.397	Erinaceus_europaeus
ENSEBUG00000011648	clp1	97	67.458	ENSELUG00000024048	clp1	96	66.979	Esox_lucius
ENSEBUG00000011648	clp1	97	72.397	ENSFCAG00000006633	CLP1	97	72.397	Felis_catus
ENSEBUG00000011648	clp1	98	72.902	ENSFALG00000011145	CLP1	98	72.902	Ficedula_albicollis
ENSEBUG00000011648	clp1	97	72.155	ENSFDAG00000000234	CLP1	97	72.155	Fukomys_damarensis
ENSEBUG00000011648	clp1	99	64.733	ENSFHEG00000014760	CLP1	98	64.733	Fundulus_heteroclitus
ENSEBUG00000011648	clp1	98	68.558	ENSGMOG00000019340	clp1	96	68.558	Gadus_morhua
ENSEBUG00000011648	clp1	98	73.621	ENSGALG00000007370	CLP1	98	73.621	Gallus_gallus
ENSEBUG00000011648	clp1	99	64.733	ENSGAFG00000003020	clp1	99	64.733	Gambusia_affinis
ENSEBUG00000011648	clp1	98	65.728	ENSGACG00000017832	clp1	96	65.728	Gasterosteus_aculeatus
ENSEBUG00000011648	clp1	99	72.706	ENSGAGG00000013279	CLP1	99	72.706	Gopherus_agassizii
ENSEBUG00000011648	clp1	97	72.155	ENSGGOG00000023006	CLP1	97	72.155	Gorilla_gorilla
ENSEBUG00000011648	clp1	99	64.501	ENSHBUG00000010436	clp1	98	64.501	Haplochromis_burtoni
ENSEBUG00000011648	clp1	97	72.155	ENSHGLG00000009914	CLP1	97	72.155	Heterocephalus_glaber_female
ENSEBUG00000011648	clp1	97	72.155	ENSHGLG00100006105	CLP1	97	72.155	Heterocephalus_glaber_male
ENSEBUG00000011648	clp1	99	65.661	ENSHCOG00000010072	clp1	98	65.661	Hippocampus_comes
ENSEBUG00000011648	clp1	97	67.221	ENSIPUG00000016238	clp1	94	67.221	Ictalurus_punctatus
ENSEBUG00000011648	clp1	97	72.397	ENSSTOG00000029257	CLP1	97	72.397	Ictidomys_tridecemlineatus
ENSEBUG00000011648	clp1	97	72.155	ENSJJAG00000023691	Clp1	97	72.155	Jaculus_jaculus
ENSEBUG00000011648	clp1	99	64.965	ENSKMAG00000011990	clp1	98	64.965	Kryptolebias_marmoratus
ENSEBUG00000011648	clp1	99	65.893	ENSLBEG00000010201	clp1	98	65.893	Labrus_bergylta
ENSEBUG00000011648	clp1	100	71.059	ENSLACG00000003160	CLP1	100	71.059	Latimeria_chalumnae
ENSEBUG00000011648	clp1	73	68.634	ENSLOCG00000008074	clp1	100	69.255	Lepisosteus_oculatus
ENSEBUG00000011648	clp1	97	72.397	ENSLAFG00000014907	CLP1	97	72.397	Loxodonta_africana
ENSEBUG00000011648	clp1	97	72.155	ENSMFAG00000046074	CLP1	97	72.155	Macaca_fascicularis
ENSEBUG00000011648	clp1	97	72.155	ENSMMUG00000038007	CLP1	96	72.155	Macaca_mulatta
ENSEBUG00000011648	clp1	97	72.155	ENSMNEG00000000259	CLP1	97	72.155	Macaca_nemestrina
ENSEBUG00000011648	clp1	97	72.155	ENSMLEG00000043556	CLP1	97	72.155	Mandrillus_leucophaeus
ENSEBUG00000011648	clp1	99	64.965	ENSMAMG00000002149	clp1	98	64.965	Mastacembelus_armatus
ENSEBUG00000011648	clp1	99	64.269	ENSMZEG00005002850	clp1	98	64.269	Maylandia_zebra
ENSEBUG00000011648	clp1	98	73.621	ENSMGAG00000009643	CLP1	98	73.621	Meleagris_gallopavo
ENSEBUG00000011648	clp1	97	71.913	ENSMAUG00000016261	Clp1	97	71.913	Mesocricetus_auratus
ENSEBUG00000011648	clp1	97	72.397	ENSMICG00000004895	CLP1	97	72.397	Microcebus_murinus
ENSEBUG00000011648	clp1	97	72.397	ENSMOCG00000005498	Clp1	97	72.397	Microtus_ochrogaster
ENSEBUG00000011648	clp1	98	65.493	ENSMMOG00000003229	clp1	96	65.493	Mola_mola
ENSEBUG00000011648	clp1	97	72.639	ENSMODG00000020107	-	97	72.639	Monodelphis_domestica
ENSEBUG00000011648	clp1	97	72.639	ENSMODG00000024148	-	97	72.639	Monodelphis_domestica
ENSEBUG00000011648	clp1	99	64.501	ENSMALG00000014239	clp1	98	64.501	Monopterus_albus
ENSEBUG00000011648	clp1	97	72.397	MGP_CAROLIEiJ_G0023726	Clp1	97	72.397	Mus_caroli
ENSEBUG00000011648	clp1	97	72.397	ENSMUSG00000027079	Clp1	97	72.397	Mus_musculus
ENSEBUG00000011648	clp1	97	72.397	MGP_PahariEiJ_G0025177	Clp1	97	72.397	Mus_pahari
ENSEBUG00000011648	clp1	97	72.397	MGP_SPRETEiJ_G0024646	Clp1	97	72.397	Mus_spretus
ENSEBUG00000011648	clp1	97	72.397	ENSMPUG00000000268	CLP1	97	72.397	Mustela_putorius_furo
ENSEBUG00000011648	clp1	97	72.397	ENSMLUG00000007904	CLP1	97	72.397	Myotis_lucifugus
ENSEBUG00000011648	clp1	97	72.155	ENSNGAG00000006165	Clp1	97	72.155	Nannospalax_galili
ENSEBUG00000011648	clp1	99	64.269	ENSNBRG00000005225	clp1	98	64.269	Neolamprologus_brichardi
ENSEBUG00000011648	clp1	72	72.000	ENSNLEG00000012809	-	96	72.000	Nomascus_leucogenys
ENSEBUG00000011648	clp1	98	72.048	ENSMEUG00000010949	CLP1	97	72.397	Notamacropus_eugenii
ENSEBUG00000011648	clp1	70	73.826	ENSOPRG00000007329	CLP1	100	73.826	Ochotona_princeps
ENSEBUG00000011648	clp1	97	72.155	ENSODEG00000011410	CLP1	97	72.155	Octodon_degus
ENSEBUG00000011648	clp1	99	64.037	ENSONIG00000005089	clp1	98	64.037	Oreochromis_niloticus
ENSEBUG00000011648	clp1	97	72.397	ENSOCUG00000007045	CLP1	97	72.397	Oryctolagus_cuniculus
ENSEBUG00000011648	clp1	99	63.573	ENSORLG00000003647	clp1	98	63.573	Oryzias_latipes
ENSEBUG00000011648	clp1	99	63.805	ENSORLG00020016676	clp1	98	63.805	Oryzias_latipes_hni
ENSEBUG00000011648	clp1	99	63.573	ENSORLG00015019484	clp1	98	63.573	Oryzias_latipes_hsok
ENSEBUG00000011648	clp1	100	63.741	ENSOMEG00000021303	clp1	98	63.741	Oryzias_melastigma
ENSEBUG00000011648	clp1	97	72.397	ENSOGAG00000004508	CLP1	97	72.397	Otolemur_garnettii
ENSEBUG00000011648	clp1	97	71.671	ENSOARG00000010145	CLP1	95	71.671	Ovis_aries
ENSEBUG00000011648	clp1	97	72.155	ENSPPAG00000041519	CLP1	97	72.155	Pan_paniscus
ENSEBUG00000011648	clp1	97	72.397	ENSPPRG00000006135	CLP1	97	72.397	Panthera_pardus
ENSEBUG00000011648	clp1	97	72.397	ENSPTIG00000015866	CLP1	97	72.397	Panthera_tigris_altaica
ENSEBUG00000011648	clp1	97	72.155	ENSPTRG00000047318	CLP1	97	72.155	Pan_troglodytes
ENSEBUG00000011648	clp1	97	72.155	ENSPANG00000017078	CLP1	94	72.155	Papio_anubis
ENSEBUG00000011648	clp1	97	68.750	ENSPKIG00000007697	clp1	94	68.750	Paramormyrops_kingsleyae
ENSEBUG00000011648	clp1	94	69.652	ENSPSIG00000005468	CLP1	99	69.652	Pelodiscus_sinensis
ENSEBUG00000011648	clp1	98	65.493	ENSPMGG00000012171	clp1	97	65.493	Periophthalmus_magnuspinnatus
ENSEBUG00000011648	clp1	97	72.397	ENSPEMG00000011213	-	97	72.397	Peromyscus_maniculatus_bairdii
ENSEBUG00000011648	clp1	98	74.940	ENSPMAG00000006707	clp1	98	74.940	Petromyzon_marinus
ENSEBUG00000011648	clp1	97	72.639	ENSPCIG00000011899	CLP1	97	72.639	Phascolarctos_cinereus
ENSEBUG00000011648	clp1	99	64.733	ENSPFOG00000008169	clp1	98	64.733	Poecilia_formosa
ENSEBUG00000011648	clp1	100	64.434	ENSPLAG00000022388	clp1	99	64.434	Poecilia_latipinna
ENSEBUG00000011648	clp1	100	64.434	ENSPMEG00000021088	clp1	99	64.434	Poecilia_mexicana
ENSEBUG00000011648	clp1	99	64.733	ENSPREG00000017802	clp1	98	64.733	Poecilia_reticulata
ENSEBUG00000011648	clp1	53	71.875	ENSPPYG00000003266	-	100	71.875	Pongo_abelii
ENSEBUG00000011648	clp1	97	72.397	ENSPCOG00000000360	CLP1	95	72.397	Propithecus_coquereli
ENSEBUG00000011648	clp1	97	72.397	ENSPVAG00000016270	CLP1	97	72.397	Pteropus_vampyrus
ENSEBUG00000011648	clp1	99	64.501	ENSPNYG00000017274	clp1	97	64.501	Pundamilia_nyererei
ENSEBUG00000011648	clp1	97	67.696	ENSPNAG00000026460	clp1	96	67.213	Pygocentrus_nattereri
ENSEBUG00000011648	clp1	97	72.397	ENSRNOG00000007416	Clp1	97	72.397	Rattus_norvegicus
ENSEBUG00000011648	clp1	97	72.155	ENSRBIG00000018191	CLP1	97	72.155	Rhinopithecus_bieti
ENSEBUG00000011648	clp1	97	72.155	ENSRROG00000039265	CLP1	97	72.155	Rhinopithecus_roxellana
ENSEBUG00000011648	clp1	96	57.740	ENSSBOG00000010558	-	93	57.740	Saimiri_boliviensis_boliviensis
ENSEBUG00000011648	clp1	97	72.155	ENSSBOG00000032517	-	97	72.155	Saimiri_boliviensis_boliviensis
ENSEBUG00000011648	clp1	97	72.639	ENSSHAG00000015695	CLP1	97	72.639	Sarcophilus_harrisii
ENSEBUG00000011648	clp1	97	67.606	ENSSFOG00015000628	clp1	96	67.606	Scleropages_formosus
ENSEBUG00000011648	clp1	99	64.965	ENSSMAG00000019423	clp1	96	64.965	Scophthalmus_maximus
ENSEBUG00000011648	clp1	99	65.574	ENSSDUG00000014495	clp1	97	65.574	Seriola_dumerili
ENSEBUG00000011648	clp1	99	65.340	ENSSLDG00000000937	clp1	97	65.340	Seriola_lalandi_dorsalis
ENSEBUG00000011648	clp1	52	72.197	ENSSARG00000002459	CLP1	100	72.197	Sorex_araneus
ENSEBUG00000011648	clp1	99	71.294	ENSSPUG00000016811	CLP1	99	71.294	Sphenodon_punctatus
ENSEBUG00000011648	clp1	99	65.105	ENSSPAG00000016052	clp1	97	65.105	Stegastes_partitus
ENSEBUG00000011648	clp1	97	72.397	ENSSSCG00000031442	CLP1	97	72.397	Sus_scrofa
ENSEBUG00000011648	clp1	98	72.662	ENSTGUG00000007002	CLP1	98	72.662	Taeniopygia_guttata
ENSEBUG00000011648	clp1	99	65.574	ENSTRUG00000012602	clp1	97	65.574	Takifugu_rubripes
ENSEBUG00000011648	clp1	99	65.105	ENSTNIG00000013125	clp1	97	65.105	Tetraodon_nigroviridis
ENSEBUG00000011648	clp1	97	71.671	ENSTBEG00000009975	CLP1	97	71.671	Tupaia_belangeri
ENSEBUG00000011648	clp1	97	72.155	ENSTTRG00000002096	CLP1	97	72.155	Tursiops_truncatus
ENSEBUG00000011648	clp1	97	72.397	ENSUAMG00000011388	CLP1	97	72.397	Ursus_americanus
ENSEBUG00000011648	clp1	97	72.397	ENSUMAG00000018317	CLP1	97	72.397	Ursus_maritimus
ENSEBUG00000011648	clp1	97	72.397	ENSVVUG00000017138	CLP1	94	72.397	Vulpes_vulpes
ENSEBUG00000011648	clp1	97	67.229	ENSXETG00000007088	clp1	95	67.470	Xenopus_tropicalis
ENSEBUG00000011648	clp1	99	64.501	ENSXCOG00000002287	clp1	98	64.501	Xiphophorus_couchianus
ENSEBUG00000011648	clp1	99	64.501	ENSXMAG00000009783	clp1	98	64.501	Xiphophorus_maculatus