EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000011680 (Gene tree)
Gene ID: -
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 92339 bases
Position: chrFYBX02010647.1:1899915-1992253
Accession: ZDB-GENE-040823-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018709	PRP3	PF08572.10	5.3e-76	1	1
ENSEBUP00000018732	PRP3	PF08572.10	5.3e-76	1	1
ENSEBUP00000018709	PWI	PF01480.17	2e-12	1	1
ENSEBUP00000018732	PWI	PF01480.17	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019284	-	3375	-	ENSEBUP00000018709	729 (aa)	-	-
ENSEBUT00000019308	-	3341	-	ENSEBUP00000018732	729 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011680	prpf3	99	63.934	ENSG00000117360	PRPF3	100	63.934	Homo_sapiens
ENSEBUG00000011680	prpf3	100	60.805	ENSAPOG00000015584	prpf3	100	61.477	Acanthochromis_polyacanthus
ENSEBUG00000011680	prpf3	99	63.934	ENSAMEG00000001630	PRPF3	100	63.934	Ailuropoda_melanoleuca
ENSEBUG00000011680	prpf3	100	61.528	ENSACIG00000007876	prpf3	100	61.930	Amphilophus_citrinellus
ENSEBUG00000011680	prpf3	100	61.477	ENSAOCG00000011449	prpf3	100	61.662	Amphiprion_ocellaris
ENSEBUG00000011680	prpf3	100	61.611	ENSATEG00000023583	prpf3	100	61.528	Anabas_testudineus
ENSEBUG00000011680	prpf3	99	63.661	ENSAPLG00000002440	PRPF3	100	63.934	Anas_platyrhynchos
ENSEBUG00000011680	prpf3	99	62.347	ENSACAG00000003176	PRPF3	100	62.857	Anolis_carolinensis
ENSEBUG00000011680	prpf3	99	63.934	ENSANAG00000026138	PRPF3	100	63.934	Aotus_nancymaae
ENSEBUG00000011680	prpf3	100	60.805	ENSACLG00000020127	prpf3	100	60.940	Astatotilapia_calliptera
ENSEBUG00000011680	prpf3	100	63.023	ENSAMXG00000007306	prpf3	100	62.803	Astyanax_mexicanus
ENSEBUG00000011680	prpf3	99	63.934	ENSBTAG00000013946	PRPF3	100	63.934	Bos_taurus
ENSEBUG00000011680	prpf3	51	49.072	WBGene00010844	prp-3	59	49.072	Caenorhabditis_elegans
ENSEBUG00000011680	prpf3	99	63.934	ENSCJAG00000009926	PRPF3	100	63.934	Callithrix_jacchus
ENSEBUG00000011680	prpf3	99	63.934	ENSCAFG00000011820	PRPF3	100	63.934	Canis_familiaris
ENSEBUG00000011680	prpf3	81	61.745	ENSCAFG00020019653	PRPF3	100	61.745	Canis_lupus_dingo
ENSEBUG00000011680	prpf3	99	63.934	ENSCHIG00000015434	PRPF3	100	63.934	Capra_hircus
ENSEBUG00000011680	prpf3	99	64.082	ENSTSYG00000001383	PRPF3	100	64.082	Carlito_syrichta
ENSEBUG00000011680	prpf3	69	66.535	ENSCAPG00000017812	PRPF3	87	66.732	Cavia_aperea
ENSEBUG00000011680	prpf3	99	64.208	ENSCPOG00000008068	PRPF3	100	64.208	Cavia_porcellus
ENSEBUG00000011680	prpf3	99	63.934	ENSCCAG00000026380	PRPF3	100	63.934	Cebus_capucinus
ENSEBUG00000011680	prpf3	99	54.545	ENSCATG00000041778	PRPF3	100	54.545	Cercocebus_atys
ENSEBUG00000011680	prpf3	99	63.934	ENSCLAG00000015009	PRPF3	100	63.934	Chinchilla_lanigera
ENSEBUG00000011680	prpf3	76	76.277	ENSCHOG00000011645	PRPF3	75	76.277	Choloepus_hoffmanni
ENSEBUG00000011680	prpf3	99	63.798	ENSCPBG00000008216	PRPF3	100	63.934	Chrysemys_picta_bellii
ENSEBUG00000011680	prpf3	57	57.820	ENSCING00000003312	-	99	57.820	Ciona_intestinalis
ENSEBUG00000011680	prpf3	65	54.470	ENSCSAVG00000008720	-	93	49.830	Ciona_savignyi
ENSEBUG00000011680	prpf3	99	63.885	ENSCANG00000036769	PRPF3	100	63.885	Colobus_angolensis_palliatus
ENSEBUG00000011680	prpf3	99	63.934	ENSCGRG00001019100	Prpf3	100	63.934	Cricetulus_griseus_chok1gshd
ENSEBUG00000011680	prpf3	99	63.934	ENSCGRG00000007322	Prpf3	100	63.934	Cricetulus_griseus_crigri
ENSEBUG00000011680	prpf3	100	60.322	ENSCSEG00000002532	prpf3	100	60.456	Cynoglossus_semilaevis
ENSEBUG00000011680	prpf3	100	60.823	ENSCVAG00000009318	prpf3	100	60.530	Cyprinodon_variegatus
ENSEBUG00000011680	prpf3	100	61.911	ENSDARG00000086425	prpf3	100	61.745	Danio_rerio
ENSEBUG00000011680	prpf3	90	73.973	ENSDNOG00000005904	PRPF3	100	65.591	Dasypus_novemcinctus
ENSEBUG00000011680	prpf3	93	62.610	ENSDORG00000008664	Prpf3	100	62.757	Dipodomys_ordii
ENSEBUG00000011680	prpf3	81	49.916	FBgn0036915	Prp3	90	54.839	Drosophila_melanogaster
ENSEBUG00000011680	prpf3	99	63.798	ENSETEG00000019124	PRPF3	99	63.798	Echinops_telfairi
ENSEBUG00000011680	prpf3	99	63.798	ENSEASG00005001566	PRPF3	100	63.798	Equus_asinus_asinus
ENSEBUG00000011680	prpf3	99	63.934	ENSECAG00000019840	PRPF3	100	63.934	Equus_caballus
ENSEBUG00000011680	prpf3	81	67.045	ENSEEUG00000007338	PRPF3	84	67.045	Erinaceus_europaeus
ENSEBUG00000011680	prpf3	100	54.459	ENSELUG00000013624	prpf3	100	54.595	Esox_lucius
ENSEBUG00000011680	prpf3	99	63.934	ENSFCAG00000013940	PRPF3	100	63.934	Felis_catus
ENSEBUG00000011680	prpf3	99	63.661	ENSFDAG00000010365	PRPF3	100	63.661	Fukomys_damarensis
ENSEBUG00000011680	prpf3	100	61.789	ENSFHEG00000021746	prpf3	100	61.653	Fundulus_heteroclitus
ENSEBUG00000011680	prpf3	100	61.260	ENSGMOG00000008535	prpf3	100	61.312	Gadus_morhua
ENSEBUG00000011680	prpf3	99	63.525	ENSGALG00000028205	PRPF3	100	63.798	Gallus_gallus
ENSEBUG00000011680	prpf3	100	61.260	ENSGAFG00000012671	prpf3	100	60.992	Gambusia_affinis
ENSEBUG00000011680	prpf3	100	60.940	ENSGACG00000011792	prpf3	100	60.456	Gasterosteus_aculeatus
ENSEBUG00000011680	prpf3	99	63.874	ENSGAGG00000013765	PRPF3	100	66.214	Gopherus_agassizii
ENSEBUG00000011680	prpf3	87	72.174	ENSGGOG00000013174	PRPF3	100	72.515	Gorilla_gorilla
ENSEBUG00000011680	prpf3	100	61.104	ENSHBUG00000003493	prpf3	100	61.238	Haplochromis_burtoni
ENSEBUG00000011680	prpf3	99	45.765	ENSHGLG00000016033	-	100	45.765	Heterocephalus_glaber_female
ENSEBUG00000011680	prpf3	99	63.934	ENSHGLG00000016569	PRPF3	100	63.934	Heterocephalus_glaber_female
ENSEBUG00000011680	prpf3	89	67.857	ENSHGLG00100008951	-	95	67.857	Heterocephalus_glaber_male
ENSEBUG00000011680	prpf3	99	63.934	ENSHGLG00100007590	PRPF3	100	63.934	Heterocephalus_glaber_male
ENSEBUG00000011680	prpf3	99	59.329	ENSHCOG00000014058	prpf3	99	59.517	Hippocampus_comes
ENSEBUG00000011680	prpf3	100	61.269	ENSIPUG00000000902	PRPF3	100	61.507	Ictalurus_punctatus
ENSEBUG00000011680	prpf3	99	63.934	ENSSTOG00000001889	PRPF3	100	63.934	Ictidomys_tridecemlineatus
ENSEBUG00000011680	prpf3	100	59.761	ENSKMAG00000001390	prpf3	100	60.456	Kryptolebias_marmoratus
ENSEBUG00000011680	prpf3	100	60.992	ENSLBEG00000026310	prpf3	100	62.115	Labrus_bergylta
ENSEBUG00000011680	prpf3	93	59.325	ENSLACG00000010541	PRPF3	100	59.329	Latimeria_chalumnae
ENSEBUG00000011680	prpf3	99	63.934	ENSLAFG00000004713	PRPF3	100	63.934	Loxodonta_africana
ENSEBUG00000011680	prpf3	99	63.934	ENSMFAG00000039791	PRPF3	100	63.934	Macaca_fascicularis
ENSEBUG00000011680	prpf3	91	63.063	ENSMMUG00000016301	PRPF3	98	63.063	Macaca_mulatta
ENSEBUG00000011680	prpf3	99	63.934	ENSMNEG00000038161	PRPF3	100	63.934	Macaca_nemestrina
ENSEBUG00000011680	prpf3	98	44.490	ENSMLEG00000041065	-	98	44.490	Mandrillus_leucophaeus
ENSEBUG00000011680	prpf3	87	72.174	ENSMLEG00000040609	PRPF3	100	72.515	Mandrillus_leucophaeus
ENSEBUG00000011680	prpf3	100	61.477	ENSMAMG00000014968	prpf3	100	60.667	Mastacembelus_armatus
ENSEBUG00000011680	prpf3	100	61.342	ENSMZEG00005015970	prpf3	96	67.054	Maylandia_zebra
ENSEBUG00000011680	prpf3	99	63.525	ENSMGAG00000000707	PRPF3	100	63.798	Meleagris_gallopavo
ENSEBUG00000011680	prpf3	99	63.934	ENSMAUG00000017112	Prpf3	100	63.934	Mesocricetus_auratus
ENSEBUG00000011680	prpf3	99	64.071	ENSMICG00000015386	PRPF3	100	66.214	Microcebus_murinus
ENSEBUG00000011680	prpf3	99	63.946	ENSMOCG00000000242	Prpf3	100	63.946	Microtus_ochrogaster
ENSEBUG00000011680	prpf3	100	55.827	ENSMMOG00000016131	prpf3	100	56.022	Mola_mola
ENSEBUG00000011680	prpf3	99	64.344	ENSMODG00000018774	PRPF3	100	64.344	Monodelphis_domestica
ENSEBUG00000011680	prpf3	100	59.893	ENSMALG00000007257	prpf3	100	60.481	Monopterus_albus
ENSEBUG00000011680	prpf3	99	64.071	MGP_CAROLIEiJ_G0025354	Prpf3	100	64.208	Mus_caroli
ENSEBUG00000011680	prpf3	99	64.071	ENSMUSG00000015748	Prpf3	100	64.208	Mus_musculus
ENSEBUG00000011680	prpf3	99	64.071	MGP_PahariEiJ_G0026798	Prpf3	100	64.071	Mus_pahari
ENSEBUG00000011680	prpf3	99	64.071	MGP_SPRETEiJ_G0026298	Prpf3	100	64.208	Mus_spretus
ENSEBUG00000011680	prpf3	99	62.213	ENSMPUG00000005080	PRPF3	100	62.978	Mustela_putorius_furo
ENSEBUG00000011680	prpf3	99	63.859	ENSMLUG00000004646	-	100	63.859	Myotis_lucifugus
ENSEBUG00000011680	prpf3	99	63.934	ENSNGAG00000000910	Prpf3	100	63.934	Nannospalax_galili
ENSEBUG00000011680	prpf3	100	61.178	ENSNBRG00000003462	prpf3	100	61.178	Neolamprologus_brichardi
ENSEBUG00000011680	prpf3	90	63.142	ENSNLEG00000009841	PRPF3	99	63.278	Nomascus_leucogenys
ENSEBUG00000011680	prpf3	83	62.281	ENSMEUG00000008733	PRPF3	89	62.281	Notamacropus_eugenii
ENSEBUG00000011680	prpf3	99	63.798	ENSOPRG00000010139	PRPF3	99	63.798	Ochotona_princeps
ENSEBUG00000011680	prpf3	99	49.315	ENSODEG00000014412	-	99	49.315	Octodon_degus
ENSEBUG00000011680	prpf3	99	64.060	ENSODEG00000011363	-	99	64.060	Octodon_degus
ENSEBUG00000011680	prpf3	100	61.342	ENSONIG00000006394	prpf3	100	61.611	Oreochromis_niloticus
ENSEBUG00000011680	prpf3	99	50.543	ENSOANG00000015441	PRPF3	100	50.543	Ornithorhynchus_anatinus
ENSEBUG00000011680	prpf3	99	63.934	ENSOCUG00000011760	PRPF3	100	63.934	Oryctolagus_cuniculus
ENSEBUG00000011680	prpf3	100	61.898	ENSORLG00000010330	prpf3	100	61.364	Oryzias_latipes
ENSEBUG00000011680	prpf3	100	61.898	ENSORLG00020009054	prpf3	100	61.364	Oryzias_latipes_hni
ENSEBUG00000011680	prpf3	100	61.631	ENSORLG00015015016	prpf3	100	61.230	Oryzias_latipes_hsok
ENSEBUG00000011680	prpf3	100	61.497	ENSOMEG00000000940	prpf3	100	60.963	Oryzias_melastigma
ENSEBUG00000011680	prpf3	99	60.627	ENSOGAG00000005352	PRPF3	100	60.627	Otolemur_garnettii
ENSEBUG00000011680	prpf3	99	63.934	ENSOARG00000020798	PRPF3	100	63.934	Ovis_aries
ENSEBUG00000011680	prpf3	99	63.798	ENSPPAG00000030983	PRPF3	100	63.798	Pan_paniscus
ENSEBUG00000011680	prpf3	98	51.385	ENSPPAG00000043769	-	99	51.662	Pan_paniscus
ENSEBUG00000011680	prpf3	99	63.934	ENSPPRG00000000731	PRPF3	100	63.934	Panthera_pardus
ENSEBUG00000011680	prpf3	99	63.934	ENSPTIG00000005516	PRPF3	100	63.934	Panthera_tigris_altaica
ENSEBUG00000011680	prpf3	99	63.934	ENSPTRG00000001254	PRPF3	100	63.934	Pan_troglodytes
ENSEBUG00000011680	prpf3	98	50.693	ENSPTRG00000047819	-	99	50.970	Pan_troglodytes
ENSEBUG00000011680	prpf3	99	64.071	ENSPANG00000000499	PRPF3	100	64.071	Papio_anubis
ENSEBUG00000011680	prpf3	100	62.735	ENSPKIG00000010501	prpf3	100	63.293	Paramormyrops_kingsleyae
ENSEBUG00000011680	prpf3	99	63.201	ENSPSIG00000014877	PRPF3	100	63.338	Pelodiscus_sinensis
ENSEBUG00000011680	prpf3	100	54.939	ENSPMGG00000007776	prpf3	100	54.668	Periophthalmus_magnuspinnatus
ENSEBUG00000011680	prpf3	99	63.934	ENSPEMG00000011672	Prpf3	100	63.934	Peromyscus_maniculatus_bairdii
ENSEBUG00000011680	prpf3	60	75.854	ENSPMAG00000005588	prpf3	97	75.737	Petromyzon_marinus
ENSEBUG00000011680	prpf3	99	64.344	ENSPCIG00000008795	PRPF3	100	64.344	Phascolarctos_cinereus
ENSEBUG00000011680	prpf3	100	61.037	ENSPFOG00000013638	prpf3	100	61.170	Poecilia_formosa
ENSEBUG00000011680	prpf3	100	61.260	ENSPLAG00000018103	prpf3	100	61.394	Poecilia_latipinna
ENSEBUG00000011680	prpf3	100	60.875	ENSPMEG00000023546	prpf3	100	61.008	Poecilia_mexicana
ENSEBUG00000011680	prpf3	100	60.858	ENSPREG00000017216	prpf3	100	60.992	Poecilia_reticulata
ENSEBUG00000011680	prpf3	77	55.240	ENSPPYG00000018646	-	100	55.240	Pongo_abelii
ENSEBUG00000011680	prpf3	93	62.737	ENSPPYG00000000900	PRPF3	99	62.865	Pongo_abelii
ENSEBUG00000011680	prpf3	87	63.850	ENSPCAG00000014908	PRPF3	87	63.850	Procavia_capensis
ENSEBUG00000011680	prpf3	99	63.934	ENSPCOG00000013828	PRPF3	100	63.934	Propithecus_coquereli
ENSEBUG00000011680	prpf3	99	63.129	ENSPVAG00000013472	PRPF3	100	63.129	Pteropus_vampyrus
ENSEBUG00000011680	prpf3	100	61.312	ENSPNYG00000004279	prpf3	100	61.446	Pundamilia_nyererei
ENSEBUG00000011680	prpf3	100	61.528	ENSPNAG00000001799	prpf3	100	62.078	Pygocentrus_nattereri
ENSEBUG00000011680	prpf3	99	64.071	ENSRNOG00000025629	Prpf3	100	64.208	Rattus_norvegicus
ENSEBUG00000011680	prpf3	84	70.922	ENSRBIG00000028854	PRPF3	98	70.922	Rhinopithecus_bieti
ENSEBUG00000011680	prpf3	99	63.934	ENSRROG00000027464	PRPF3	100	63.934	Rhinopithecus_roxellana
ENSEBUG00000011680	prpf3	99	59.234	ENSSBOG00000033104	PRPF3	100	59.234	Saimiri_boliviensis_boliviensis
ENSEBUG00000011680	prpf3	99	63.984	ENSSHAG00000009548	PRPF3	100	63.984	Sarcophilus_harrisii
ENSEBUG00000011680	prpf3	100	62.249	ENSSFOG00015022014	prpf3	100	62.249	Scleropages_formosus
ENSEBUG00000011680	prpf3	100	62.383	ENSSMAG00000015739	prpf3	100	62.383	Scophthalmus_maximus
ENSEBUG00000011680	prpf3	100	58.602	ENSSDUG00000006840	prpf3	100	58.658	Seriola_dumerili
ENSEBUG00000011680	prpf3	100	62.416	ENSSLDG00000015423	prpf3	100	62.550	Seriola_lalandi_dorsalis
ENSEBUG00000011680	prpf3	99	63.798	ENSSARG00000011064	PRPF3	100	63.798	Sorex_araneus
ENSEBUG00000011680	prpf3	99	62.162	ENSSPUG00000000809	PRPF3	99	62.652	Sphenodon_punctatus
ENSEBUG00000011680	prpf3	100	61.611	ENSSPAG00000018721	prpf3	100	61.580	Stegastes_partitus
ENSEBUG00000011680	prpf3	99	63.934	ENSSSCG00000030119	PRPF3	100	66.044	Sus_scrofa
ENSEBUG00000011680	prpf3	99	54.817	ENSTGUG00000004552	PRPF3	99	54.755	Taeniopygia_guttata
ENSEBUG00000011680	prpf3	99	60.298	ENSTRUG00000014923	prpf3	100	59.973	Takifugu_rubripes
ENSEBUG00000011680	prpf3	99	59.867	ENSTNIG00000008058	prpf3	99	59.867	Tetraodon_nigroviridis
ENSEBUG00000011680	prpf3	77	65.909	ENSTBEG00000014072	PRPF3	87	67.500	Tupaia_belangeri
ENSEBUG00000011680	prpf3	99	59.426	ENSTTRG00000010616	PRPF3	100	59.426	Tursiops_truncatus
ENSEBUG00000011680	prpf3	80	66.044	ENSUAMG00000009345	PRPF3	100	66.044	Ursus_americanus
ENSEBUG00000011680	prpf3	99	63.934	ENSUMAG00000003720	PRPF3	100	63.934	Ursus_maritimus
ENSEBUG00000011680	prpf3	84	71.591	ENSVPAG00000005425	PRPF3	89	71.591	Vicugna_pacos
ENSEBUG00000011680	prpf3	90	73.973	ENSVVUG00000007933	PRPF3	100	65.591	Vulpes_vulpes
ENSEBUG00000011680	prpf3	99	63.351	ENSXETG00000018654	prpf3	100	63.624	Xenopus_tropicalis
ENSEBUG00000011680	prpf3	100	60.477	ENSXMAG00000016347	prpf3	100	60.610	Xiphophorus_maculatus