EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000011723 (Gene tree)
Gene ID: -
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated%2C Ras related GTPase 1B
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 41313 bases
Position: chrFYBX02010672.1:321100-362412
Accession: ZDB-GENE-040426-1958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018800	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSEBUP00000018788	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019376	-	3726	-	ENSEBUP00000018800	197 (aa)	-	-
ENSEBUT00000019364	-	4127	-	ENSEBUP00000018788	222 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000011723	sar1b	70	31.387	ENSEBUG00000014954	arl2	70	30.282
ENSEBUG00000011723	sar1b	71	33.803	ENSEBUG00000004484	-	85	33.803
ENSEBUG00000011723	sar1b	68	30.597	ENSEBUG00000010483	-	72	30.597
ENSEBUG00000011723	sar1b	64	35.156	ENSEBUG00000004741	arl4cb	63	35.156
ENSEBUG00000011723	sar1b	64	34.815	ENSEBUG00000007051	-	67	34.815
ENSEBUG00000011723	sar1b	89	32.961	ENSEBUG00000011004	arl6	90	32.961
ENSEBUG00000011723	sar1b	64	35.938	ENSEBUG00000005056	arl4aa	60	35.938
ENSEBUG00000011723	sar1b	97	30.964	ENSEBUG00000006528	arl13b	70	30.457
ENSEBUG00000011723	sar1b	88	30.636	ENSEBUG00000005272	arf2b	77	30.636
ENSEBUG00000011723	sar1b	88	31.429	ENSEBUG00000014420	-	89	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011723	sar1b	97	80.729	ENSAPOG00000017891	-	97	80.729	Acanthochromis_polyacanthus
ENSEBUG00000011723	sar1b	97	88.021	ENSAPOG00000007186	sar1b	97	88.021	Acanthochromis_polyacanthus
ENSEBUG00000011723	sar1b	97	79.688	ENSACIG00000024513	-	97	79.688	Amphilophus_citrinellus
ENSEBUG00000011723	sar1b	98	88.660	ENSACIG00000013634	sar1b	98	88.660	Amphilophus_citrinellus
ENSEBUG00000011723	sar1b	97	88.542	ENSAOCG00000005888	sar1b	97	88.542	Amphiprion_ocellaris
ENSEBUG00000011723	sar1b	97	80.729	ENSAOCG00000002627	-	97	80.729	Amphiprion_ocellaris
ENSEBUG00000011723	sar1b	97	80.729	ENSAPEG00000019680	-	97	80.729	Amphiprion_percula
ENSEBUG00000011723	sar1b	97	88.542	ENSAPEG00000022771	sar1b	97	88.542	Amphiprion_percula
ENSEBUG00000011723	sar1b	98	86.598	ENSATEG00000012904	sar1b	98	86.598	Anabas_testudineus
ENSEBUG00000011723	sar1b	97	78.646	ENSATEG00000023368	-	97	78.646	Anabas_testudineus
ENSEBUG00000011723	sar1b	98	88.660	ENSACAG00000001470	-	98	88.660	Anolis_carolinensis
ENSEBUG00000011723	sar1b	97	80.729	ENSACLG00000005011	-	97	80.729	Astatotilapia_calliptera
ENSEBUG00000011723	sar1b	98	89.175	ENSACLG00000014649	sar1b	98	89.175	Astatotilapia_calliptera
ENSEBUG00000011723	sar1b	97	82.292	ENSAMXG00000034192	-	88	82.292	Astyanax_mexicanus
ENSEBUG00000011723	sar1b	56	88.182	ENSAMXG00000018108	sar1b	79	88.182	Astyanax_mexicanus
ENSEBUG00000011723	sar1b	97	84.293	ENSCSEG00000015238	sar1b	93	84.293	Cynoglossus_semilaevis
ENSEBUG00000011723	sar1b	98	78.866	ENSCSEG00000016976	-	98	78.866	Cynoglossus_semilaevis
ENSEBUG00000011723	sar1b	97	89.062	ENSCVAG00000022959	sar1b	97	89.062	Cyprinodon_variegatus
ENSEBUG00000011723	sar1b	97	88.542	ENSDARG00000103403	sar1b	97	88.542	Danio_rerio
ENSEBUG00000011723	sar1b	97	71.728	FBgn0038947	Sar1	99	71.728	Drosophila_melanogaster
ENSEBUG00000011723	sar1b	97	88.021	ENSELUG00000020912	sar1b	97	88.021	Esox_lucius
ENSEBUG00000011723	sar1b	97	88.021	ENSFHEG00000019865	sar1b	97	88.021	Fundulus_heteroclitus
ENSEBUG00000011723	sar1b	97	88.021	ENSGMOG00000008023	sar1b	97	88.021	Gadus_morhua
ENSEBUG00000011723	sar1b	97	88.021	ENSGAFG00000007081	sar1b	97	88.021	Gambusia_affinis
ENSEBUG00000011723	sar1b	98	87.629	ENSGACG00000001474	sar1b	98	87.629	Gasterosteus_aculeatus
ENSEBUG00000011723	sar1b	97	80.729	ENSHBUG00000018397	-	97	80.729	Haplochromis_burtoni
ENSEBUG00000011723	sar1b	98	89.175	ENSHBUG00000000915	sar1b	98	89.175	Haplochromis_burtoni
ENSEBUG00000011723	sar1b	97	88.542	ENSHCOG00000010953	sar1b	97	88.542	Hippocampus_comes
ENSEBUG00000011723	sar1b	97	82.292	ENSIPUG00000010046	sar1b	97	82.292	Ictalurus_punctatus
ENSEBUG00000011723	sar1b	97	86.458	ENSIPUG00000020925	sar1b	97	86.458	Ictalurus_punctatus
ENSEBUG00000011723	sar1b	97	87.500	ENSKMAG00000019693	sar1b	97	87.500	Kryptolebias_marmoratus
ENSEBUG00000011723	sar1b	97	79.688	ENSKMAG00000014875	-	97	79.688	Kryptolebias_marmoratus
ENSEBUG00000011723	sar1b	97	81.250	ENSLBEG00000016945	-	97	81.250	Labrus_bergylta
ENSEBUG00000011723	sar1b	97	86.458	ENSLBEG00000027550	sar1b	97	86.458	Labrus_bergylta
ENSEBUG00000011723	sar1b	98	83.420	ENSLACG00000010795	sar1b	98	82.990	Latimeria_chalumnae
ENSEBUG00000011723	sar1b	94	75.269	ENSLACG00000017029	-	93	75.269	Latimeria_chalumnae
ENSEBUG00000011723	sar1b	97	89.062	ENSLOCG00000010197	sar1b	97	89.062	Lepisosteus_oculatus
ENSEBUG00000011723	sar1b	97	88.021	ENSLOCG00000005214	-	97	88.021	Lepisosteus_oculatus
ENSEBUG00000011723	sar1b	98	88.660	ENSMAMG00000021732	sar1b	98	88.660	Mastacembelus_armatus
ENSEBUG00000011723	sar1b	98	89.175	ENSMZEG00005008942	sar1b	98	89.175	Maylandia_zebra
ENSEBUG00000011723	sar1b	97	80.729	ENSMZEG00005001012	-	97	80.729	Maylandia_zebra
ENSEBUG00000011723	sar1b	91	90.503	ENSMGAG00000005387	-	91	90.503	Meleagris_gallopavo
ENSEBUG00000011723	sar1b	97	80.208	ENSMMOG00000013803	-	97	80.208	Mola_mola
ENSEBUG00000011723	sar1b	97	89.062	ENSMALG00000016635	sar1b	93	90.286	Monopterus_albus
ENSEBUG00000011723	sar1b	97	80.729	ENSNBRG00000014004	-	97	80.729	Neolamprologus_brichardi
ENSEBUG00000011723	sar1b	98	89.691	ENSNBRG00000008013	sar1b	98	89.691	Neolamprologus_brichardi
ENSEBUG00000011723	sar1b	98	89.175	ENSONIG00000017278	sar1b	98	89.175	Oreochromis_niloticus
ENSEBUG00000011723	sar1b	97	88.542	ENSORLG00000000932	sar1b	97	88.542	Oryzias_latipes
ENSEBUG00000011723	sar1b	97	88.542	ENSORLG00020021985	sar1b	97	88.542	Oryzias_latipes_hni
ENSEBUG00000011723	sar1b	97	88.542	ENSORLG00015007044	sar1b	97	88.542	Oryzias_latipes_hsok
ENSEBUG00000011723	sar1b	97	88.542	ENSOMEG00000001052	sar1b	97	88.542	Oryzias_melastigma
ENSEBUG00000011723	sar1b	97	88.542	ENSPKIG00000010688	sar1b	97	88.542	Paramormyrops_kingsleyae
ENSEBUG00000011723	sar1b	97	88.542	ENSPKIG00000017353	-	97	88.542	Paramormyrops_kingsleyae
ENSEBUG00000011723	sar1b	56	90.909	ENSPMGG00000001234	sar1b	86	90.909	Periophthalmus_magnuspinnatus
ENSEBUG00000011723	sar1b	97	83.077	ENSPMAG00000003593	sar1b	97	83.077	Petromyzon_marinus
ENSEBUG00000011723	sar1b	97	88.021	ENSPFOG00000005666	sar1b	97	88.021	Poecilia_formosa
ENSEBUG00000011723	sar1b	97	88.021	ENSPLAG00000012223	sar1b	97	88.021	Poecilia_latipinna
ENSEBUG00000011723	sar1b	56	81.818	ENSPLAG00000001016	-	71	81.818	Poecilia_latipinna
ENSEBUG00000011723	sar1b	97	88.021	ENSPMEG00000016831	sar1b	97	88.021	Poecilia_mexicana
ENSEBUG00000011723	sar1b	57	80.357	ENSPREG00000002020	-	83	80.357	Poecilia_reticulata
ENSEBUG00000011723	sar1b	97	88.021	ENSPREG00000005312	sar1b	88	88.021	Poecilia_reticulata
ENSEBUG00000011723	sar1b	97	80.729	ENSPNYG00000021357	-	97	80.729	Pundamilia_nyererei
ENSEBUG00000011723	sar1b	98	89.175	ENSPNYG00000012440	sar1b	98	89.175	Pundamilia_nyererei
ENSEBUG00000011723	sar1b	97	82.292	ENSPNAG00000001123	-	97	82.292	Pygocentrus_nattereri
ENSEBUG00000011723	sar1b	97	89.062	ENSPNAG00000014683	sar1b	97	89.062	Pygocentrus_nattereri
ENSEBUG00000011723	sar1b	97	89.583	ENSSFOG00015020051	sar1b	97	89.583	Scleropages_formosus
ENSEBUG00000011723	sar1b	97	88.542	ENSSFOG00015018128	-	97	88.542	Scleropages_formosus
ENSEBUG00000011723	sar1b	98	86.082	ENSSMAG00000007106	sar1b	78	86.082	Scophthalmus_maximus
ENSEBUG00000011723	sar1b	98	80.412	ENSSMAG00000002165	-	98	80.412	Scophthalmus_maximus
ENSEBUG00000011723	sar1b	97	89.583	ENSSDUG00000020926	sar1b	97	89.583	Seriola_dumerili
ENSEBUG00000011723	sar1b	97	80.208	ENSSDUG00000019629	-	97	80.208	Seriola_dumerili
ENSEBUG00000011723	sar1b	97	89.583	ENSSLDG00000017052	sar1b	97	89.583	Seriola_lalandi_dorsalis
ENSEBUG00000011723	sar1b	97	80.208	ENSSLDG00000024197	-	97	80.208	Seriola_lalandi_dorsalis
ENSEBUG00000011723	sar1b	98	88.083	ENSSPUG00000010247	-	98	87.629	Sphenodon_punctatus
ENSEBUG00000011723	sar1b	97	88.021	ENSSPAG00000017634	sar1b	97	88.021	Stegastes_partitus
ENSEBUG00000011723	sar1b	97	80.208	ENSSPAG00000015626	-	97	80.208	Stegastes_partitus
ENSEBUG00000011723	sar1b	98	84.536	ENSTRUG00000023908	sar1b	98	84.536	Takifugu_rubripes
ENSEBUG00000011723	sar1b	98	86.598	ENSTNIG00000016097	sar1b	98	86.598	Tetraodon_nigroviridis
ENSEBUG00000011723	sar1b	58	78.947	ENSXCOG00000006154	-	77	78.947	Xiphophorus_couchianus
ENSEBUG00000011723	sar1b	90	89.326	ENSXCOG00000004160	sar1b	87	89.326	Xiphophorus_couchianus
ENSEBUG00000011723	sar1b	97	88.021	ENSXMAG00000008294	sar1b	97	88.021	Xiphophorus_maculatus