EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000011730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 91647 bases
Position: chrFYBX02010233.1:4792-96438
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018798	zf-C2H2	PF00096.26	6e-35	1	6
ENSEBUP00000018798	zf-C2H2	PF00096.26	6e-35	2	6
ENSEBUP00000018798	zf-C2H2	PF00096.26	6e-35	3	6
ENSEBUP00000018798	zf-C2H2	PF00096.26	6e-35	4	6
ENSEBUP00000018798	zf-C2H2	PF00096.26	6e-35	5	6
ENSEBUP00000018798	zf-C2H2	PF00096.26	6e-35	6	6
ENSEBUP00000018798	zf-met	PF12874.7	8e-15	1	4
ENSEBUP00000018798	zf-met	PF12874.7	8e-15	2	4
ENSEBUP00000018798	zf-met	PF12874.7	8e-15	3	4
ENSEBUP00000018798	zf-met	PF12874.7	8e-15	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019374	-	2989	-	ENSEBUP00000018798	554 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000011730	-	58	50.224	ENSEBUG00000003078	-	72	50.224
ENSEBUG00000011730	-	51	45.817	ENSEBUG00000011123	-	96	48.606
ENSEBUG00000011730	-	51	49.296	ENSEBUG00000003644	-	79	49.296
ENSEBUG00000011730	-	53	47.236	ENSEBUG00000008107	-	91	47.236
ENSEBUG00000011730	-	62	47.600	ENSEBUG00000008792	-	89	47.600
ENSEBUG00000011730	-	70	51.200	ENSEBUG00000013157	-	86	51.200
ENSEBUG00000011730	-	51	53.386	ENSEBUG00000008392	-	77	53.386
ENSEBUG00000011730	-	56	40.476	ENSEBUG00000005186	-	79	40.476
ENSEBUG00000011730	-	70	50.781	ENSEBUG00000011244	-	98	50.781
ENSEBUG00000011730	-	69	54.737	ENSEBUG00000014730	-	82	54.737
ENSEBUG00000011730	-	56	47.343	ENSEBUG00000015456	-	90	47.807
ENSEBUG00000011730	-	78	50.661	ENSEBUG00000007797	-	99	52.381
ENSEBUG00000011730	-	53	49.801	ENSEBUG00000012775	-	70	50.000
ENSEBUG00000011730	-	51	49.225	ENSEBUG00000002537	-	90	49.225
ENSEBUG00000011730	-	50	52.778	ENSEBUG00000008157	-	98	52.778
ENSEBUG00000011730	-	51	49.339	ENSEBUG00000009208	-	58	49.339
ENSEBUG00000011730	-	50	50.909	ENSEBUG00000011764	-	53	50.909
ENSEBUG00000011730	-	60	62.825	ENSEBUG00000012314	-	82	62.275
ENSEBUG00000011730	-	54	49.638	ENSEBUG00000005131	-	66	50.787
ENSEBUG00000011730	-	51	48.945	ENSEBUG00000002589	-	74	49.153
ENSEBUG00000011730	-	56	40.541	ENSEBUG00000006129	-	79	40.385
ENSEBUG00000011730	-	55	39.615	ENSEBUG00000016164	-	69	39.615
ENSEBUG00000011730	-	57	53.150	ENSEBUG00000011112	-	70	53.150
ENSEBUG00000011730	-	50	48.182	ENSEBUG00000001741	-	72	41.786
ENSEBUG00000011730	-	70	39.066	ENSEBUG00000012053	-	92	38.725
ENSEBUG00000011730	-	73	38.462	ENSEBUG00000012704	-	75	49.242
ENSEBUG00000011730	-	58	51.793	ENSEBUG00000006666	-	79	51.793
ENSEBUG00000011730	-	78	53.600	ENSEBUG00000015576	-	96	53.600
ENSEBUG00000011730	-	56	39.936	ENSEBUG00000009436	-	93	40.323
ENSEBUG00000011730	-	67	47.810	ENSEBUG00000003954	-	66	49.107
ENSEBUG00000011730	-	74	53.200	ENSEBUG00000004011	-	92	55.378
ENSEBUG00000011730	-	70	70.833	ENSEBUG00000006032	-	91	70.833
ENSEBUG00000011730	-	56	54.400	ENSEBUG00000000554	-	80	54.400
ENSEBUG00000011730	-	68	50.568	ENSEBUG00000007012	-	90	50.568
ENSEBUG00000011730	-	51	52.191	ENSEBUG00000008272	-	66	52.191
ENSEBUG00000011730	-	53	53.785	ENSEBUG00000006249	-	87	53.785
ENSEBUG00000011730	-	56	49.434	ENSEBUG00000014597	-	86	51.394
ENSEBUG00000011730	-	54	53.386	ENSEBUG00000012502	-	83	53.386
ENSEBUG00000011730	-	51	47.179	ENSEBUG00000010878	-	51	47.179
ENSEBUG00000011730	-	56	52.191	ENSEBUG00000002454	-	85	53.785
ENSEBUG00000011730	-	55	50.199	ENSEBUG00000013355	-	68	50.199
ENSEBUG00000011730	-	54	43.874	ENSEBUG00000007305	-	85	43.874
ENSEBUG00000011730	-	56	50.397	ENSEBUG00000007308	ZNF845	94	50.397
ENSEBUG00000011730	-	50	41.633	ENSEBUG00000014704	ZBTB17	87	41.633
ENSEBUG00000011730	-	68	50.394	ENSEBUG00000014388	-	94	50.394
ENSEBUG00000011730	-	57	51.394	ENSEBUG00000014648	-	68	53.386
ENSEBUG00000011730	-	55	47.012	ENSEBUG00000006080	-	81	47.012
ENSEBUG00000011730	-	50	48.031	ENSEBUG00000005258	-	66	48.031
ENSEBUG00000011730	-	56	55.686	ENSEBUG00000015925	-	84	55.686
ENSEBUG00000011730	-	57	51.793	ENSEBUG00000006811	-	87	51.793
ENSEBUG00000011730	-	52	49.099	ENSEBUG00000014677	-	84	49.099
ENSEBUG00000011730	-	53	51.685	ENSEBUG00000007143	-	55	51.685
ENSEBUG00000011730	-	68	43.046	ENSEBUG00000011562	-	88	43.046
ENSEBUG00000011730	-	51	52.727	ENSEBUG00000002291	-	65	52.727
ENSEBUG00000011730	-	52	46.800	ENSEBUG00000011694	-	95	48.669
ENSEBUG00000011730	-	51	40.511	ENSEBUG00000003842	-	88	42.912
ENSEBUG00000011730	-	54	49.112	ENSEBUG00000010472	-	74	50.435
ENSEBUG00000011730	-	54	53.234	ENSEBUG00000001329	-	89	53.234
ENSEBUG00000011730	-	54	49.402	ENSEBUG00000005785	-	69	49.402
ENSEBUG00000011730	-	53	52.157	ENSEBUG00000012737	-	74	52.400
ENSEBUG00000011730	-	50	51.938	ENSEBUG00000000704	-	81	51.938
ENSEBUG00000011730	-	61	47.500	ENSEBUG00000005310	ZNF226	79	47.244
ENSEBUG00000011730	-	50	50.916	ENSEBUG00000006847	-	77	50.916
ENSEBUG00000011730	-	57	46.188	ENSEBUG00000006092	-	60	47.619
ENSEBUG00000011730	-	50	49.402	ENSEBUG00000015834	-	79	49.402
ENSEBUG00000011730	-	70	48.000	ENSEBUG00000015837	-	98	48.000
ENSEBUG00000011730	-	70	42.105	ENSEBUG00000001219	-	88	54.132
ENSEBUG00000011730	-	63	47.082	ENSEBUG00000008991	-	90	47.082
ENSEBUG00000011730	-	57	54.980	ENSEBUG00000009291	-	83	54.980
ENSEBUG00000011730	-	70	54.400	ENSEBUG00000003590	-	96	54.400
ENSEBUG00000011730	-	51	50.973	ENSEBUG00000011479	-	73	50.973
ENSEBUG00000011730	-	70	54.000	ENSEBUG00000014050	-	97	54.000
ENSEBUG00000011730	-	74	51.200	ENSEBUG00000012919	-	85	51.200
ENSEBUG00000011730	-	54	51.190	ENSEBUG00000016878	-	85	51.190
ENSEBUG00000011730	-	79	41.833	ENSEBUG00000014717	-	88	41.833
ENSEBUG00000011730	-	51	51.639	ENSEBUG00000014469	-	78	51.639
ENSEBUG00000011730	-	57	47.253	ENSEBUG00000014284	-	96	47.244
ENSEBUG00000011730	-	59	48.696	ENSEBUG00000015472	-	75	47.458
ENSEBUG00000011730	-	53	49.402	ENSEBUG00000004839	-	74	49.402
ENSEBUG00000011730	-	50	47.809	ENSEBUG00000014667	-	76	47.809
ENSEBUG00000011730	-	54	40.094	ENSEBUG00000013392	-	57	40.094
ENSEBUG00000011730	-	51	48.691	ENSEBUG00000011977	-	71	48.691
ENSEBUG00000011730	-	51	50.199	ENSEBUG00000015207	-	61	50.199
ENSEBUG00000011730	-	53	44.492	ENSEBUG00000007470	-	87	47.200
ENSEBUG00000011730	-	69	54.980	ENSEBUG00000008988	ZNF845	84	54.980
ENSEBUG00000011730	-	56	52.988	ENSEBUG00000007375	-	83	52.988
ENSEBUG00000011730	-	76	53.968	ENSEBUG00000001121	-	98	53.968
ENSEBUG00000011730	-	51	45.148	ENSEBUG00000015693	-	81	45.148
ENSEBUG00000011730	-	50	40.580	ENSEBUG00000015155	-	72	40.580
ENSEBUG00000011730	-	71	52.679	ENSEBUG00000015159	-	99	52.679
ENSEBUG00000011730	-	56	49.550	ENSEBUG00000009484	-	55	49.550
ENSEBUG00000011730	-	71	51.515	ENSEBUG00000014042	-	83	55.779
ENSEBUG00000011730	-	51	53.778	ENSEBUG00000014040	-	71	53.778
ENSEBUG00000011730	-	67	46.528	ENSEBUG00000005655	-	77	46.528
ENSEBUG00000011730	-	53	42.629	ENSEBUG00000012454	-	85	43.777
ENSEBUG00000011730	-	70	46.471	ENSEBUG00000007980	-	65	46.667
ENSEBUG00000011730	-	50	53.307	ENSEBUG00000015403	-	71	53.725
ENSEBUG00000011730	-	54	55.777	ENSEBUG00000006702	-	77	55.777
ENSEBUG00000011730	-	54	50.617	ENSEBUG00000002075	-	78	51.200
ENSEBUG00000011730	-	56	50.598	ENSEBUG00000004026	-	61	50.598
ENSEBUG00000011730	-	70	46.429	ENSEBUG00000003459	-	99	46.429
ENSEBUG00000011730	-	62	53.386	ENSEBUG00000003455	-	76	53.386
ENSEBUG00000011730	-	70	53.333	ENSEBUG00000008169	-	87	53.333
ENSEBUG00000011730	-	52	48.178	ENSEBUG00000014659	-	80	48.178
ENSEBUG00000011730	-	60	50.254	ENSEBUG00000003555	-	62	50.254
ENSEBUG00000011730	-	70	52.800	ENSEBUG00000011435	-	96	52.800
ENSEBUG00000011730	-	75	52.800	ENSEBUG00000017017	-	87	52.800
ENSEBUG00000011730	-	55	51.012	ENSEBUG00000009666	-	83	52.000
ENSEBUG00000011730	-	57	54.275	ENSEBUG00000013683	-	99	51.754
ENSEBUG00000011730	-	70	50.943	ENSEBUG00000013528	-	93	42.487
ENSEBUG00000011730	-	65	48.800	ENSEBUG00000007740	-	97	48.800
ENSEBUG00000011730	-	69	46.957	ENSEBUG00000016287	-	85	46.957
ENSEBUG00000011730	-	51	48.768	ENSEBUG00000010756	-	96	48.768
ENSEBUG00000011730	-	64	40.157	ENSEBUG00000013221	-	81	40.157
ENSEBUG00000011730	-	70	52.764	ENSEBUG00000008306	-	97	51.542
ENSEBUG00000011730	-	68	53.386	ENSEBUG00000012823	-	71	53.386
ENSEBUG00000011730	-	51	47.085	ENSEBUG00000013573	-	82	47.085
ENSEBUG00000011730	-	58	51.394	ENSEBUG00000012628	ZNF845	82	50.394
ENSEBUG00000011730	-	55	49.533	ENSEBUG00000004597	-	71	49.533
ENSEBUG00000011730	-	54	40.271	ENSEBUG00000012939	-	77	40.271
ENSEBUG00000011730	-	53	51.984	ENSEBUG00000000735	-	98	52.590
ENSEBUG00000011730	-	69	49.490	ENSEBUG00000016857	-	95	49.490
ENSEBUG00000011730	-	56	52.381	ENSEBUG00000014739	-	80	52.381
ENSEBUG00000011730	-	71	51.556	ENSEBUG00000004999	-	94	51.556
ENSEBUG00000011730	-	53	50.400	ENSEBUG00000005146	-	93	50.400
ENSEBUG00000011730	-	64	52.191	ENSEBUG00000007563	-	62	52.988
ENSEBUG00000011730	-	54	52.778	ENSEBUG00000005264	-	63	52.778
ENSEBUG00000011730	-	50	50.980	ENSEBUG00000011728	-	73	50.980
ENSEBUG00000011730	-	74	50.598	ENSEBUG00000009909	-	81	50.598
ENSEBUG00000011730	-	53	58.427	ENSEBUG00000008903	-	74	58.427
ENSEBUG00000011730	-	72	48.399	ENSEBUG00000008852	ZNF845	72	53.000
ENSEBUG00000011730	-	50	53.175	ENSEBUG00000015522	-	70	53.175
ENSEBUG00000011730	-	65	51.793	ENSEBUG00000006233	-	65	51.793
ENSEBUG00000011730	-	53	47.809	ENSEBUG00000004841	-	76	47.809
ENSEBUG00000011730	-	52	50.199	ENSEBUG00000002032	-	80	50.199
ENSEBUG00000011730	-	70	61.722	ENSEBUG00000003512	-	96	63.590
ENSEBUG00000011730	-	70	51.953	ENSEBUG00000010205	-	81	51.953
ENSEBUG00000011730	-	55	42.972	ENSEBUG00000010204	-	68	42.972
ENSEBUG00000011730	-	50	51.101	ENSEBUG00000014888	-	51	51.101
ENSEBUG00000011730	-	58	47.291	ENSEBUG00000015993	-	60	47.291
ENSEBUG00000011730	-	58	45.020	ENSEBUG00000001525	-	84	45.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011730	-	50	42.012	ENSGAFG00000014563	-	52	42.012	Gambusia_affinis
ENSEBUG00000011730	-	53	45.701	ENSHBUG00000009941	-	63	45.701	Haplochromis_burtoni
ENSEBUG00000011730	-	51	51.261	ENSKMAG00000019180	-	59	51.261	Kryptolebias_marmoratus
ENSEBUG00000011730	-	53	51.190	ENSORLG00000028457	-	87	55.128	Oryzias_latipes
ENSEBUG00000011730	-	56	45.249	ENSPNYG00000011973	-	88	45.249	Pundamilia_nyererei
ENSEBUG00000011730	-	51	51.220	ENSXCOG00000010950	si:dkey-210j14.3	73	51.220	Xiphophorus_couchianus