EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000011775 (Gene tree)
Gene ID: -
Gene Symbol: rab11ba
Alias: rab11b|wu:fb07g11|zgc:55760
Full Name: RAB11B%2C member RAS oncogene family%2C a
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 44456 bases
Position: chrFYBX02010783.1:2637690-2682145
Accession: ZDB-GENE-040426-2860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000018871	MMR_HSR1	PF01926.23	2.1e-07	1	1
ENSEBUP00000018878	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019447	-	4073	-	ENSEBUP00000018871	222 (aa)	-	-
ENSEBUT00000019454	-	3193	-	ENSEBUP00000018878	208 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000011775	rab11ba	76	36.478	ENSEBUG00000000963	-	85	38.411
ENSEBUG00000011775	rab11ba	93	33.505	ENSEBUG00000003339	-	94	34.010
ENSEBUG00000011775	rab11ba	72	32.667	ENSEBUG00000015012	kras	90	32.584
ENSEBUG00000011775	rab11ba	57	35.115	ENSEBUG00000008934	rab36	50	35.115
ENSEBUG00000011775	rab11ba	55	32.773	ENSEBUG00000004741	arl4cb	57	32.231
ENSEBUG00000011775	rab11ba	87	36.082	ENSEBUG00000009003	-	86	36.548
ENSEBUG00000011775	rab11ba	79	47.273	ENSEBUG00000006581	rab12	80	47.273
ENSEBUG00000011775	rab11ba	55	31.034	ENSEBUG00000005056	arl4aa	54	30.508
ENSEBUG00000011775	rab11ba	76	31.515	ENSEBUG00000002259	RAB29	81	32.353
ENSEBUG00000011775	rab11ba	78	44.242	ENSEBUG00000004971	-	79	43.860
ENSEBUG00000011775	rab11ba	73	30.061	ENSEBUG00000002306	rheb	88	30.061
ENSEBUG00000011775	rab11ba	86	39.665	ENSEBUG00000015845	-	82	39.227
ENSEBUG00000011775	rab11ba	76	31.875	ENSEBUG00000003784	rhebl1	88	33.333
ENSEBUG00000011775	rab11ba	99	82.439	ENSEBUG00000015447	-	100	80.734
ENSEBUG00000011775	rab11ba	67	30.769	ENSEBUG00000009183	arl8ba	72	30.345
ENSEBUG00000011775	rab11ba	77	45.342	ENSEBUG00000014794	rab5c	77	46.012
ENSEBUG00000011775	rab11ba	99	87.317	ENSEBUG00000007493	rab11a	100	87.615
ENSEBUG00000011775	rab11ba	97	48.148	ENSEBUG00000015886	-	100	48.148
ENSEBUG00000011775	rab11ba	72	34.000	ENSEBUG00000004670	hrasb	85	35.185
ENSEBUG00000011775	rab11ba	67	31.429	ENSEBUG00000016527	-	59	30.986
ENSEBUG00000011775	rab11ba	70	30.263	ENSEBUG00000014186	-	74	32.335
ENSEBUG00000011775	rab11ba	88	36.264	ENSEBUG00000010861	-	75	35.263
ENSEBUG00000011775	rab11ba	97	36.715	ENSEBUG00000004967	rab9b	97	37.143
ENSEBUG00000011775	rab11ba	76	40.000	ENSEBUG00000012680	-	68	39.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011775	rab11ba	99	94.146	ENSG00000185236	RAB11B	100	97.826	Homo_sapiens
ENSEBUG00000011775	rab11ba	98	94.089	ENSAMEG00000004955	RAB11B	99	92.694	Ailuropoda_melanoleuca
ENSEBUG00000011775	rab11ba	82	90.608	ENSACIG00000024374	rab11ba	74	90.608	Amphilophus_citrinellus
ENSEBUG00000011775	rab11ba	99	90.244	ENSAOCG00000018050	rab11ba	100	90.367	Amphiprion_ocellaris
ENSEBUG00000011775	rab11ba	99	89.756	ENSAPEG00000009177	rab11ba	100	89.908	Amphiprion_percula
ENSEBUG00000011775	rab11ba	99	91.220	ENSATEG00000023730	rab11ba	100	91.284	Anabas_testudineus
ENSEBUG00000011775	rab11ba	99	94.146	ENSANAG00000037616	RAB11B	100	94.037	Aotus_nancymaae
ENSEBUG00000011775	rab11ba	99	89.268	ENSACLG00000005420	rab11ba	100	89.908	Astatotilapia_calliptera
ENSEBUG00000011775	rab11ba	98	82.028	ENSACLG00000018852	-	97	82.028	Astatotilapia_calliptera
ENSEBUG00000011775	rab11ba	97	79.167	WBGene00004274	rab-11.1	99	79.167	Caenorhabditis_elegans
ENSEBUG00000011775	rab11ba	99	94.146	ENSCJAG00000010778	RAB11B	100	94.037	Callithrix_jacchus
ENSEBUG00000011775	rab11ba	99	94.146	ENSCAFG00000032060	RAB11B	100	94.037	Canis_familiaris
ENSEBUG00000011775	rab11ba	99	94.146	ENSCAFG00020022184	RAB11B	100	94.037	Canis_lupus_dingo
ENSEBUG00000011775	rab11ba	99	94.146	ENSTSYG00000014758	RAB11B	100	94.037	Carlito_syrichta
ENSEBUG00000011775	rab11ba	99	93.659	ENSCPOG00000030154	RAB11B	100	93.578	Cavia_porcellus
ENSEBUG00000011775	rab11ba	99	94.146	ENSCCAG00000031042	RAB11B	100	94.037	Cebus_capucinus
ENSEBUG00000011775	rab11ba	99	94.146	ENSCLAG00000003207	RAB11B	100	94.037	Chinchilla_lanigera
ENSEBUG00000011775	rab11ba	99	94.146	ENSCSAG00000008024	RAB11B	100	94.037	Chlorocebus_sabaeus
ENSEBUG00000011775	rab11ba	99	79.512	ENSCHOG00000013525	RAB11B	100	80.275	Choloepus_hoffmanni
ENSEBUG00000011775	rab11ba	99	82.524	ENSCING00000009526	-	100	82.648	Ciona_intestinalis
ENSEBUG00000011775	rab11ba	99	94.146	ENSCANG00000040517	RAB11B	100	94.037	Colobus_angolensis_palliatus
ENSEBUG00000011775	rab11ba	99	94.146	ENSCGRG00001013827	Rab11b	100	94.037	Cricetulus_griseus_chok1gshd
ENSEBUG00000011775	rab11ba	99	94.146	ENSCGRG00000010967	Rab11b	100	94.037	Cricetulus_griseus_crigri
ENSEBUG00000011775	rab11ba	99	90.732	ENSCSEG00000007121	rab11ba	86	90.045	Cynoglossus_semilaevis
ENSEBUG00000011775	rab11ba	99	91.220	ENSDARG00000041878	rab11ba	100	91.284	Danio_rerio
ENSEBUG00000011775	rab11ba	99	93.171	ENSDNOG00000004134	-	100	92.202	Dasypus_novemcinctus
ENSEBUG00000011775	rab11ba	99	94.146	ENSDNOG00000014618	RAB11B	97	94.037	Dasypus_novemcinctus
ENSEBUG00000011775	rab11ba	99	94.146	ENSDORG00000006304	Rab11b	100	94.037	Dipodomys_ordii
ENSEBUG00000011775	rab11ba	64	98.601	ENSEEUG00000009165	-	100	98.601	Erinaceus_europaeus
ENSEBUG00000011775	rab11ba	87	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSEBUG00000011775	rab11ba	99	93.659	ENSFCAG00000015216	RAB11B	100	93.578	Felis_catus
ENSEBUG00000011775	rab11ba	99	93.659	ENSFDAG00000019872	RAB11B	100	93.578	Fukomys_damarensis
ENSEBUG00000011775	rab11ba	99	90.244	ENSFHEG00000022642	rab11ba	100	90.367	Fundulus_heteroclitus
ENSEBUG00000011775	rab11ba	99	89.498	ENSGMOG00000007390	rab11ba	100	89.498	Gadus_morhua
ENSEBUG00000011775	rab11ba	99	90.244	ENSGAFG00000005679	rab11ba	100	90.367	Gambusia_affinis
ENSEBUG00000011775	rab11ba	99	93.171	ENSGAGG00000012557	-	100	93.119	Gopherus_agassizii
ENSEBUG00000011775	rab11ba	99	94.146	ENSHGLG00000014984	RAB11B	100	94.037	Heterocephalus_glaber_female
ENSEBUG00000011775	rab11ba	99	93.659	ENSHGLG00100003638	RAB11B	100	93.578	Heterocephalus_glaber_male
ENSEBUG00000011775	rab11ba	99	94.146	ENSSTOG00000031571	RAB11B	100	94.037	Ictidomys_tridecemlineatus
ENSEBUG00000011775	rab11ba	99	94.146	ENSJJAG00000018891	Rab11b	100	94.037	Jaculus_jaculus
ENSEBUG00000011775	rab11ba	99	90.732	ENSKMAG00000006082	-	100	90.826	Kryptolebias_marmoratus
ENSEBUG00000011775	rab11ba	99	89.268	ENSLBEG00000006087	rab11ba	100	89.450	Labrus_bergylta
ENSEBUG00000011775	rab11ba	76	97.041	ENSLACG00000016974	RAB11B	98	97.041	Latimeria_chalumnae
ENSEBUG00000011775	rab11ba	99	94.146	ENSLAFG00000013598	RAB11B	100	94.037	Loxodonta_africana
ENSEBUG00000011775	rab11ba	99	94.146	ENSMNEG00000039759	-	100	94.037	Macaca_nemestrina
ENSEBUG00000011775	rab11ba	99	90.244	ENSMAMG00000018556	rab11ba	100	90.367	Mastacembelus_armatus
ENSEBUG00000011775	rab11ba	99	89.268	ENSMZEG00005010947	rab11ba	100	89.908	Maylandia_zebra
ENSEBUG00000011775	rab11ba	98	82.028	ENSMZEG00005019251	-	97	82.028	Maylandia_zebra
ENSEBUG00000011775	rab11ba	99	93.659	ENSMAUG00000021579	Rab11b	100	93.578	Mesocricetus_auratus
ENSEBUG00000011775	rab11ba	99	93.659	ENSMOCG00000012667	Rab11b	100	93.578	Microtus_ochrogaster
ENSEBUG00000011775	rab11ba	99	88.780	ENSMALG00000021949	rab11ba	100	88.532	Monopterus_albus
ENSEBUG00000011775	rab11ba	99	94.146	MGP_CAROLIEiJ_G0021415	Rab11b	97	97.931	Mus_caroli
ENSEBUG00000011775	rab11ba	99	93.171	ENSMUSG00000077450	Rab11b	97	97.931	Mus_musculus
ENSEBUG00000011775	rab11ba	99	94.146	MGP_PahariEiJ_G0020420	Rab11b	100	94.037	Mus_pahari
ENSEBUG00000011775	rab11ba	99	94.146	MGP_SPRETEiJ_G0022327	Rab11b	97	97.931	Mus_spretus
ENSEBUG00000011775	rab11ba	99	93.659	ENSMPUG00000007263	RAB11B	100	93.578	Mustela_putorius_furo
ENSEBUG00000011775	rab11ba	99	89.904	ENSMLUG00000002308	-	100	89.593	Myotis_lucifugus
ENSEBUG00000011775	rab11ba	99	94.146	ENSNGAG00000015757	Rab11b	100	94.037	Nannospalax_galili
ENSEBUG00000011775	rab11ba	99	89.756	ENSNBRG00000023898	rab11ba	84	90.367	Neolamprologus_brichardi
ENSEBUG00000011775	rab11ba	99	94.146	ENSNLEG00000001733	RAB11B	100	94.037	Nomascus_leucogenys
ENSEBUG00000011775	rab11ba	99	94.146	ENSODEG00000011371	RAB11B	100	94.037	Octodon_degus
ENSEBUG00000011775	rab11ba	99	90.244	ENSONIG00000002535	rab11ba	100	90.826	Oreochromis_niloticus
ENSEBUG00000011775	rab11ba	75	98.077	ENSOCUG00000028208	RAB11B	64	95.652	Oryctolagus_cuniculus
ENSEBUG00000011775	rab11ba	98	91.705	ENSORLG00000015307	rab11ba	99	91.705	Oryzias_latipes
ENSEBUG00000011775	rab11ba	98	91.705	ENSORLG00020020816	rab11ba	99	91.705	Oryzias_latipes_hni
ENSEBUG00000011775	rab11ba	98	92.118	ENSORLG00015016946	rab11ba	81	92.130	Oryzias_latipes_hsok
ENSEBUG00000011775	rab11ba	98	91.705	ENSOMEG00000002581	rab11ba	99	91.705	Oryzias_melastigma
ENSEBUG00000011775	rab11ba	99	94.146	ENSOGAG00000003227	RAB11B	99	94.037	Otolemur_garnettii
ENSEBUG00000011775	rab11ba	99	94.146	ENSOARG00000003801	RAB11B	97	94.037	Ovis_aries
ENSEBUG00000011775	rab11ba	81	92.778	ENSPPRG00000010160	RAB11B	88	92.778	Panthera_pardus
ENSEBUG00000011775	rab11ba	99	94.146	ENSPEMG00000014536	Rab11b	100	94.037	Peromyscus_maniculatus_bairdii
ENSEBUG00000011775	rab11ba	99	81.643	ENSPMAG00000009335	-	100	81.643	Petromyzon_marinus
ENSEBUG00000011775	rab11ba	99	90.732	ENSPFOG00000006159	rab11ba	100	90.826	Poecilia_formosa
ENSEBUG00000011775	rab11ba	99	90.732	ENSPLAG00000014243	rab11ba	100	90.826	Poecilia_latipinna
ENSEBUG00000011775	rab11ba	99	90.732	ENSPMEG00000007917	rab11ba	75	90.826	Poecilia_mexicana
ENSEBUG00000011775	rab11ba	99	90.732	ENSPREG00000006357	rab11ba	78	90.826	Poecilia_reticulata
ENSEBUG00000011775	rab11ba	99	94.146	ENSPPYG00000009504	RAB11B	100	94.037	Pongo_abelii
ENSEBUG00000011775	rab11ba	99	84.878	ENSPCAG00000016118	RAB11B	100	85.321	Procavia_capensis
ENSEBUG00000011775	rab11ba	99	94.175	ENSPCOG00000028053	RAB11B	100	94.037	Propithecus_coquereli
ENSEBUG00000011775	rab11ba	66	96.575	ENSPCOG00000008655	-	100	96.575	Propithecus_coquereli
ENSEBUG00000011775	rab11ba	99	94.146	ENSPVAG00000009645	RAB11B	100	94.037	Pteropus_vampyrus
ENSEBUG00000011775	rab11ba	99	89.268	ENSPNYG00000019644	rab11ba	100	89.908	Pundamilia_nyererei
ENSEBUG00000011775	rab11ba	92	76.214	ENSPNYG00000023810	-	90	76.214	Pundamilia_nyererei
ENSEBUG00000011775	rab11ba	99	92.195	ENSPNAG00000020475	rab11ba	100	92.202	Pygocentrus_nattereri
ENSEBUG00000011775	rab11ba	99	93.171	ENSPNAG00000006431	-	100	92.661	Pygocentrus_nattereri
ENSEBUG00000011775	rab11ba	99	94.146	ENSRNOG00000007648	Rab11b	100	94.037	Rattus_norvegicus
ENSEBUG00000011775	rab11ba	99	94.146	ENSSBOG00000035094	RAB11B	100	94.037	Saimiri_boliviensis_boliviensis
ENSEBUG00000011775	rab11ba	99	90.732	ENSSDUG00000002965	rab11ba	100	90.826	Seriola_dumerili
ENSEBUG00000011775	rab11ba	99	90.732	ENSSLDG00000005221	rab11ba	100	90.826	Seriola_lalandi_dorsalis
ENSEBUG00000011775	rab11ba	99	89.756	ENSSPAG00000017313	rab11ba	100	89.908	Stegastes_partitus
ENSEBUG00000011775	rab11ba	99	94.146	ENSSSCG00000013600	RAB11B	100	94.037	Sus_scrofa
ENSEBUG00000011775	rab11ba	62	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSEBUG00000011775	rab11ba	99	94.146	ENSTTRG00000009758	RAB11B	100	94.037	Tursiops_truncatus
ENSEBUG00000011775	rab11ba	93	83.505	ENSUMAG00000014594	RAB11B	97	80.000	Ursus_maritimus
ENSEBUG00000011775	rab11ba	99	94.146	ENSVVUG00000025210	RAB11B	100	94.037	Vulpes_vulpes
ENSEBUG00000011775	rab11ba	99	91.220	ENSXETG00000021890	rab11b.2	99	91.284	Xenopus_tropicalis
ENSEBUG00000011775	rab11ba	60	96.241	ENSXCOG00000009194	-	98	96.241	Xiphophorus_couchianus
ENSEBUG00000011775	rab11ba	99	90.244	ENSXMAG00000013416	rab11ba	100	90.367	Xiphophorus_maculatus