EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000011912 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 40276 bases
Position: chrFYBX02010348.1:332107-372382
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000019145	RRM_1	PF00076.22	6.2e-33	1	3
ENSEBUP00000019145	RRM_1	PF00076.22	6.2e-33	2	3
ENSEBUP00000019145	RRM_1	PF00076.22	6.2e-33	3	3
ENSEBUP00000019139	RRM_1	PF00076.22	9.7e-33	1	3
ENSEBUP00000019139	RRM_1	PF00076.22	9.7e-33	2	3
ENSEBUP00000019139	RRM_1	PF00076.22	9.7e-33	3	3
ENSEBUP00000019123	RRM_1	PF00076.22	9.9e-33	1	3
ENSEBUP00000019123	RRM_1	PF00076.22	9.9e-33	2	3
ENSEBUP00000019123	RRM_1	PF00076.22	9.9e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019721	-	2576	-	ENSEBUP00000019145	531 (aa)	-	-
ENSEBUT00000019699	-	4241	-	ENSEBUP00000019123	588 (aa)	-	-
ENSEBUT00000019715	-	4204	-	ENSEBUP00000019139	582 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000011912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000011912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000011912	rbm47	59	46.809	ENSEBUG00000014750	-	56	44.262
ENSEBUG00000011912	rbm47	73	62.374	ENSEBUG00000008428	plrg1	74	62.374
ENSEBUG00000011912	rbm47	54	56.000	ENSEBUG00000015949	-	59	56.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000011912	rbm47	95	75.145	ENSG00000163694	RBM47	100	71.429	Homo_sapiens
ENSEBUG00000011912	rbm47	86	74.640	ENSAPOG00000011062	rbm47	99	58.113	Acanthochromis_polyacanthus
ENSEBUG00000011912	rbm47	95	59.310	ENSAMEG00000009672	RBM47	99	56.814	Ailuropoda_melanoleuca
ENSEBUG00000011912	rbm47	99	58.000	ENSACIG00000011531	rbm47	99	57.903	Amphilophus_citrinellus
ENSEBUG00000011912	rbm47	95	74.640	ENSAOCG00000022245	rbm47	99	58.541	Amphiprion_ocellaris
ENSEBUG00000011912	rbm47	95	74.640	ENSAPEG00000018304	rbm47	91	74.640	Amphiprion_percula
ENSEBUG00000011912	rbm47	95	60.243	ENSATEG00000018400	rbm47	93	59.828	Anabas_testudineus
ENSEBUG00000011912	rbm47	99	58.086	ENSAPLG00000013974	RBM47	99	56.766	Anas_platyrhynchos
ENSEBUG00000011912	rbm47	99	57.730	ENSACAG00000011833	RBM47	99	57.566	Anolis_carolinensis
ENSEBUG00000011912	rbm47	99	71.429	ENSANAG00000029440	RBM47	95	71.429	Aotus_nancymaae
ENSEBUG00000011912	rbm47	98	58.446	ENSACLG00000016902	rbm47	95	57.072	Astatotilapia_calliptera
ENSEBUG00000011912	rbm47	95	61.672	ENSAMXG00000021794	rbm47	93	61.419	Astyanax_mexicanus
ENSEBUG00000011912	rbm47	99	58.320	ENSBTAG00000002356	RBM47	99	57.661	Bos_taurus
ENSEBUG00000011912	rbm47	95	75.434	ENSCJAG00000019385	RBM47	95	71.429	Callithrix_jacchus
ENSEBUG00000011912	rbm47	96	58.131	ENSCAFG00000015898	RBM47	100	57.143	Canis_familiaris
ENSEBUG00000011912	rbm47	75	70.944	ENSCAFG00020010558	RBM47	92	60.762	Canis_lupus_dingo
ENSEBUG00000011912	rbm47	99	58.320	ENSCHIG00000026214	RBM47	99	57.661	Capra_hircus
ENSEBUG00000011912	rbm47	86	51.938	ENSTSYG00000033612	RBM47	87	78.222	Carlito_syrichta
ENSEBUG00000011912	rbm47	90	57.798	ENSCAPG00000008426	RBM47	90	57.798	Cavia_aperea
ENSEBUG00000011912	rbm47	100	70.745	ENSCPOG00000014100	RBM47	99	57.616	Cavia_porcellus
ENSEBUG00000011912	rbm47	99	40.404	ENSCCAG00000024397	-	99	39.899	Cebus_capucinus
ENSEBUG00000011912	rbm47	99	71.429	ENSCCAG00000030129	-	95	71.429	Cebus_capucinus
ENSEBUG00000011912	rbm47	95	75.145	ENSCATG00000042064	RBM47	95	70.667	Cercocebus_atys
ENSEBUG00000011912	rbm47	96	74.928	ENSCLAG00000001684	RBM47	100	67.089	Chinchilla_lanigera
ENSEBUG00000011912	rbm47	95	59.445	ENSCSAG00000017060	RBM47	99	56.931	Chlorocebus_sabaeus
ENSEBUG00000011912	rbm47	75	65.060	ENSCHOG00000011731	RBM47	65	73.669	Choloepus_hoffmanni
ENSEBUG00000011912	rbm47	99	59.106	ENSCPBG00000013831	RBM47	99	58.609	Chrysemys_picta_bellii
ENSEBUG00000011912	rbm47	95	75.145	ENSCANG00000019997	RBM47	95	70.667	Colobus_angolensis_palliatus
ENSEBUG00000011912	rbm47	95	75.575	ENSCGRG00001000623	-	95	59.240	Cricetulus_griseus_chok1gshd
ENSEBUG00000011912	rbm47	95	71.552	ENSCGRG00001020102	-	94	52.236	Cricetulus_griseus_chok1gshd
ENSEBUG00000011912	rbm47	95	59.516	ENSCGRG00000007762	-	82	77.519	Cricetulus_griseus_crigri
ENSEBUG00000011912	rbm47	95	71.552	ENSCGRG00000014760	-	94	52.236	Cricetulus_griseus_crigri
ENSEBUG00000011912	rbm47	95	60.312	ENSCSEG00000004545	rbm47	95	60.208	Cynoglossus_semilaevis
ENSEBUG00000011912	rbm47	96	59.138	ENSCVAG00000020144	rbm47	96	59.483	Cyprinodon_variegatus
ENSEBUG00000011912	rbm47	95	61.996	ENSDARG00000061985	rbm47	93	60.348	Danio_rerio
ENSEBUG00000011912	rbm47	95	60.595	ENSDNOG00000046854	RBM47	99	58.167	Dasypus_novemcinctus
ENSEBUG00000011912	rbm47	91	60.323	ENSDORG00000010144	Rbm47	99	56.557	Dipodomys_ordii
ENSEBUG00000011912	rbm47	95	60.276	ENSETEG00000009194	RBM47	95	58.834	Echinops_telfairi
ENSEBUG00000011912	rbm47	95	59.826	ENSEASG00005008443	RBM47	99	57.450	Equus_asinus_asinus
ENSEBUG00000011912	rbm47	95	59.826	ENSECAG00000004400	RBM47	99	57.450	Equus_caballus
ENSEBUG00000011912	rbm47	69	80.100	ENSEEUG00000001194	RBM47	72	72.294	Erinaceus_europaeus
ENSEBUG00000011912	rbm47	86	62.835	ENSELUG00000006148	rbm47	91	74.286	Esox_lucius
ENSEBUG00000011912	rbm47	95	59.860	ENSFCAG00000012399	RBM47	99	57.143	Felis_catus
ENSEBUG00000011912	rbm47	91	61.664	ENSFALG00000002861	RBM47	99	58.251	Ficedula_albicollis
ENSEBUG00000011912	rbm47	95	72.911	ENSFDAG00000016326	RBM47	99	56.977	Fukomys_damarensis
ENSEBUG00000011912	rbm47	100	58.541	ENSFHEG00000007938	rbm47	100	58.375	Fundulus_heteroclitus
ENSEBUG00000011912	rbm47	96	58.362	ENSGMOG00000014802	rbm47	93	57.850	Gadus_morhua
ENSEBUG00000011912	rbm47	69	70.370	ENSGALG00000014267	RBM47	99	70.292	Gallus_gallus
ENSEBUG00000011912	rbm47	69	71.850	ENSGAFG00000020571	rbm47	98	71.774	Gambusia_affinis
ENSEBUG00000011912	rbm47	82	73.977	ENSGACG00000016223	rbm47	90	73.977	Gasterosteus_aculeatus
ENSEBUG00000011912	rbm47	99	58.940	ENSGAGG00000020051	RBM47	99	58.444	Gopherus_agassizii
ENSEBUG00000011912	rbm47	95	75.145	ENSGGOG00000001367	RBM47	95	70.667	Gorilla_gorilla
ENSEBUG00000011912	rbm47	98	58.249	ENSHBUG00000003520	rbm47	93	58.904	Haplochromis_burtoni
ENSEBUG00000011912	rbm47	70	54.233	ENSHGLG00000016914	RBM47	100	66.456	Heterocephalus_glaber_female
ENSEBUG00000011912	rbm47	99	69.681	ENSHGLG00100014028	-	100	66.456	Heterocephalus_glaber_male
ENSEBUG00000011912	rbm47	93	55.814	ENSHGLG00100003071	-	98	56.172	Heterocephalus_glaber_male
ENSEBUG00000011912	rbm47	87	74.855	ENSHCOG00000002074	rbm47	91	74.855	Hippocampus_comes
ENSEBUG00000011912	rbm47	99	59.060	ENSIPUG00000004743	rbm47	99	58.765	Ictalurus_punctatus
ENSEBUG00000011912	rbm47	95	58.406	ENSSTOG00000004727	RBM47	100	65.839	Ictidomys_tridecemlineatus
ENSEBUG00000011912	rbm47	95	59.689	ENSJJAG00000013823	Rbm47	99	57.471	Jaculus_jaculus
ENSEBUG00000011912	rbm47	87	74.138	ENSKMAG00000000084	rbm47	91	74.138	Kryptolebias_marmoratus
ENSEBUG00000011912	rbm47	84	74.566	ENSLBEG00000008436	rbm47	90	74.493	Labrus_bergylta
ENSEBUG00000011912	rbm47	88	62.476	ENSLACG00000007196	RBM47	99	56.860	Latimeria_chalumnae
ENSEBUG00000011912	rbm47	95	60.984	ENSLOCG00000012966	rbm47	95	58.528	Lepisosteus_oculatus
ENSEBUG00000011912	rbm47	99	60.000	ENSLAFG00000011998	RBM47	99	58.814	Loxodonta_africana
ENSEBUG00000011912	rbm47	95	75.145	ENSMFAG00000037967	RBM47	95	70.667	Macaca_fascicularis
ENSEBUG00000011912	rbm47	95	59.445	ENSMMUG00000012036	RBM47	100	68.394	Macaca_mulatta
ENSEBUG00000011912	rbm47	95	75.145	ENSMNEG00000040774	RBM47	95	70.667	Macaca_nemestrina
ENSEBUG00000011912	rbm47	96	79.371	ENSMLEG00000041432	RBM47	99	73.651	Mandrillus_leucophaeus
ENSEBUG00000011912	rbm47	86	72.253	ENSMAMG00000019143	rbm47	95	58.784	Mastacembelus_armatus
ENSEBUG00000011912	rbm47	98	58.446	ENSMZEG00005023659	rbm47	95	57.072	Maylandia_zebra
ENSEBUG00000011912	rbm47	91	61.664	ENSMGAG00000012226	RBM47	99	58.416	Meleagris_gallopavo
ENSEBUG00000011912	rbm47	95	75.645	ENSMAUG00000006493	Rbm47	82	78.295	Mesocricetus_auratus
ENSEBUG00000011912	rbm47	95	74.419	ENSMICG00000026417	RBM47	99	71.237	Microcebus_murinus
ENSEBUG00000011912	rbm47	95	75.287	ENSMOCG00000021170	Rbm47	82	77.519	Microtus_ochrogaster
ENSEBUG00000011912	rbm47	97	59.253	ENSMMOG00000007260	rbm47	95	59.184	Mola_mola
ENSEBUG00000011912	rbm47	96	57.840	ENSMODG00000020561	-	95	57.491	Monodelphis_domestica
ENSEBUG00000011912	rbm47	58	68.489	ENSMODG00000015426	-	97	68.489	Monodelphis_domestica
ENSEBUG00000011912	rbm47	99	57.686	ENSMODG00000007003	RBM47	99	57.025	Monodelphis_domestica
ENSEBUG00000011912	rbm47	83	73.410	ENSMALG00000005167	rbm47	91	74.855	Monopterus_albus
ENSEBUG00000011912	rbm47	95	75.575	MGP_CAROLIEiJ_G0027258	Rbm47	82	77.519	Mus_caroli
ENSEBUG00000011912	rbm47	95	75.287	ENSMUSG00000070780	Rbm47	82	77.519	Mus_musculus
ENSEBUG00000011912	rbm47	95	75.575	MGP_PahariEiJ_G0017040	Rbm47	82	77.519	Mus_pahari
ENSEBUG00000011912	rbm47	95	75.287	MGP_SPRETEiJ_G0028253	Rbm47	82	77.519	Mus_spretus
ENSEBUG00000011912	rbm47	86	62.977	ENSMPUG00000006177	RBM47	93	56.766	Mustela_putorius_furo
ENSEBUG00000011912	rbm47	95	60.348	ENSMLUG00000000889	RBM47	95	59.413	Myotis_lucifugus
ENSEBUG00000011912	rbm47	99	57.938	ENSNGAG00000003325	Rbm47	99	57.610	Nannospalax_galili
ENSEBUG00000011912	rbm47	98	58.516	ENSNBRG00000015092	rbm47	93	58.834	Neolamprologus_brichardi
ENSEBUG00000011912	rbm47	95	75.145	ENSNLEG00000017151	RBM47	95	70.667	Nomascus_leucogenys
ENSEBUG00000011912	rbm47	76	68.106	ENSMEUG00000009516	-	97	68.106	Notamacropus_eugenii
ENSEBUG00000011912	rbm47	65	74.689	ENSOPRG00000016507	-	64	74.689	Ochotona_princeps
ENSEBUG00000011912	rbm47	95	59.233	ENSODEG00000004873	RBM47	99	57.711	Octodon_degus
ENSEBUG00000011912	rbm47	98	58.347	ENSONIG00000009061	rbm47	95	58.179	Oreochromis_niloticus
ENSEBUG00000011912	rbm47	91	61.749	ENSOANG00000008978	RBM47	99	57.807	Ornithorhynchus_anatinus
ENSEBUG00000011912	rbm47	99	57.947	ENSOCUG00000012034	RBM47	99	57.616	Oryctolagus_cuniculus
ENSEBUG00000011912	rbm47	95	73.775	ENSORLG00000005847	rbm47	91	73.775	Oryzias_latipes
ENSEBUG00000011912	rbm47	95	73.775	ENSORLG00020005154	rbm47	91	73.775	Oryzias_latipes_hni
ENSEBUG00000011912	rbm47	95	73.775	ENSORLG00015000066	rbm47	91	73.775	Oryzias_latipes_hsok
ENSEBUG00000011912	rbm47	99	58.113	ENSOMEG00000010730	rbm47	99	58.278	Oryzias_melastigma
ENSEBUG00000011912	rbm47	95	58.813	ENSOGAG00000025193	-	99	56.645	Otolemur_garnettii
ENSEBUG00000011912	rbm47	95	59.445	ENSOGAG00000029367	-	99	57.096	Otolemur_garnettii
ENSEBUG00000011912	rbm47	99	51.236	ENSOARG00000012711	RBM47	99	51.400	Ovis_aries
ENSEBUG00000011912	rbm47	95	60.070	ENSPPAG00000029763	RBM47	95	70.667	Pan_paniscus
ENSEBUG00000011912	rbm47	95	58.772	ENSPPRG00000012873	RBM47	99	70.745	Panthera_pardus
ENSEBUG00000011912	rbm47	85	57.905	ENSPTIG00000017046	RBM47	99	58.383	Panthera_tigris_altaica
ENSEBUG00000011912	rbm47	95	75.145	ENSPTRG00000016006	RBM47	95	70.667	Pan_troglodytes
ENSEBUG00000011912	rbm47	95	75.145	ENSPANG00000005980	RBM47	95	70.667	Papio_anubis
ENSEBUG00000011912	rbm47	95	73.913	ENSPKIG00000013431	RBM47	90	73.913	Paramormyrops_kingsleyae
ENSEBUG00000011912	rbm47	95	60.140	ENSPKIG00000005037	rbm47	94	59.201	Paramormyrops_kingsleyae
ENSEBUG00000011912	rbm47	88	62.639	ENSPSIG00000017516	RBM47	98	61.524	Pelodiscus_sinensis
ENSEBUG00000011912	rbm47	95	60.984	ENSPMGG00000018540	rbm47	99	58.961	Periophthalmus_magnuspinnatus
ENSEBUG00000011912	rbm47	95	75.575	ENSPEMG00000011088	Rbm47	95	58.935	Peromyscus_maniculatus_bairdii
ENSEBUG00000011912	rbm47	96	60.445	ENSPFOG00000007997	rbm47	93	59.014	Poecilia_formosa
ENSEBUG00000011912	rbm47	96	60.549	ENSPLAG00000002072	rbm47	100	54.637	Poecilia_latipinna
ENSEBUG00000011912	rbm47	100	58.197	ENSPMEG00000017492	rbm47	100	58.361	Poecilia_mexicana
ENSEBUG00000011912	rbm47	96	59.622	ENSPREG00000008456	rbm47	100	53.976	Poecilia_reticulata
ENSEBUG00000011912	rbm47	95	54.296	ENSPPYG00000014688	RBM47	97	53.688	Pongo_abelii
ENSEBUG00000011912	rbm47	73	70.426	ENSPCAG00000011879	RBM47	63	71.467	Procavia_capensis
ENSEBUG00000011912	rbm47	95	60.035	ENSPCOG00000023451	RBM47	99	58.236	Propithecus_coquereli
ENSEBUG00000011912	rbm47	95	58.651	ENSPVAG00000003812	RBM47	99	56.837	Pteropus_vampyrus
ENSEBUG00000011912	rbm47	98	58.151	ENSPNYG00000022868	rbm47	93	58.803	Pundamilia_nyererei
ENSEBUG00000011912	rbm47	95	60.733	ENSPNAG00000007940	rbm47	93	60.659	Pygocentrus_nattereri
ENSEBUG00000011912	rbm47	95	60.243	ENSRNOG00000002408	Rbm47	95	59.483	Rattus_norvegicus
ENSEBUG00000011912	rbm47	95	75.145	ENSRBIG00000039601	RBM47	95	70.667	Rhinopithecus_bieti
ENSEBUG00000011912	rbm47	95	75.145	ENSRROG00000044696	RBM47	95	70.667	Rhinopithecus_roxellana
ENSEBUG00000011912	rbm47	99	58.961	ENSSBOG00000028475	RBM47	96	71.164	Saimiri_boliviensis_boliviensis
ENSEBUG00000011912	rbm47	91	61.818	ENSSHAG00000017576	RBM47	99	58.706	Sarcophilus_harrisii
ENSEBUG00000011912	rbm47	95	58.217	ENSSFOG00015024101	RBM47	94	57.343	Scleropages_formosus
ENSEBUG00000011912	rbm47	87	63.900	ENSSFOG00015012445	rbm47	91	62.289	Scleropages_formosus
ENSEBUG00000011912	rbm47	95	74.277	ENSSMAG00000009744	rbm47	91	74.277	Scophthalmus_maximus
ENSEBUG00000011912	rbm47	99	58.182	ENSSDUG00000022684	rbm47	99	58.017	Seriola_dumerili
ENSEBUG00000011912	rbm47	99	58.070	ENSSLDG00000003109	rbm47	99	57.903	Seriola_lalandi_dorsalis
ENSEBUG00000011912	rbm47	80	67.713	ENSSARG00000001735	RBM47	75	66.816	Sorex_araneus
ENSEBUG00000011912	rbm47	99	71.467	ENSSPUG00000007515	RBM47	99	71.467	Sphenodon_punctatus
ENSEBUG00000011912	rbm47	95	74.928	ENSSPAG00000001257	rbm47	99	58.375	Stegastes_partitus
ENSEBUG00000011912	rbm47	95	75.000	ENSSSCG00000008796	RBM47	99	57.119	Sus_scrofa
ENSEBUG00000011912	rbm47	91	61.594	ENSTGUG00000008705	RBM47	99	58.347	Taeniopygia_guttata
ENSEBUG00000011912	rbm47	95	60.771	ENSTRUG00000014050	rbm47	97	60.279	Takifugu_rubripes
ENSEBUG00000011912	rbm47	97	60.445	ENSTNIG00000006127	rbm47	95	59.864	Tetraodon_nigroviridis
ENSEBUG00000011912	rbm47	65	72.254	ENSTBEG00000001607	RBM47	63	68.267	Tupaia_belangeri
ENSEBUG00000011912	rbm47	95	60.209	ENSTTRG00000002839	RBM47	99	57.807	Tursiops_truncatus
ENSEBUG00000011912	rbm47	95	59.619	ENSUAMG00000021346	RBM47	99	57.261	Ursus_americanus
ENSEBUG00000011912	rbm47	96	60.832	ENSVVUG00000014774	RBM47	100	58.128	Vulpes_vulpes
ENSEBUG00000011912	rbm47	100	57.471	ENSXETG00000012802	rbm47	92	70.449	Xenopus_tropicalis
ENSEBUG00000011912	rbm47	69	71.314	ENSXCOG00000000780	rbm47	100	55.143	Xiphophorus_couchianus
ENSEBUG00000011912	rbm47	100	58.484	ENSXMAG00000009874	rbm47	100	58.484	Xiphophorus_maculatus