EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012017 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 1891 bases
Position: chrFYBX02010410.1:1508895-1510785
Accession: ZDB-GENE-070629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000019303	LSM	PF01423.22	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000019879	-	225	-	ENSEBUP00000019303	74 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012017	lsm8	100	91.892	ENSG00000128534	LSM8	99	91.892	Homo_sapiens
ENSEBUG00000012017	lsm8	100	93.243	ENSAPOG00000008649	lsm8	77	93.243	Acanthochromis_polyacanthus
ENSEBUG00000012017	lsm8	100	91.892	ENSAMEG00000001162	LSM8	77	91.892	Ailuropoda_melanoleuca
ENSEBUG00000012017	lsm8	100	93.243	ENSACIG00000014694	lsm8	99	93.243	Amphilophus_citrinellus
ENSEBUG00000012017	lsm8	100	93.243	ENSAOCG00000013926	lsm8	77	93.243	Amphiprion_ocellaris
ENSEBUG00000012017	lsm8	100	93.243	ENSAPEG00000023502	lsm8	77	93.243	Amphiprion_percula
ENSEBUG00000012017	lsm8	100	93.243	ENSATEG00000023432	lsm8	99	93.243	Anabas_testudineus
ENSEBUG00000012017	lsm8	100	93.243	ENSAPLG00000005115	LSM8	75	93.243	Anas_platyrhynchos
ENSEBUG00000012017	lsm8	100	94.595	ENSANAG00000027771	LSM8	100	94.595	Aotus_nancymaae
ENSEBUG00000012017	lsm8	100	93.243	ENSACLG00000011253	lsm8	77	93.243	Astatotilapia_calliptera
ENSEBUG00000012017	lsm8	100	93.243	ENSAMXG00000042902	lsm8	77	93.243	Astyanax_mexicanus
ENSEBUG00000012017	lsm8	100	91.892	ENSBTAG00000012649	LSM8	77	91.892	Bos_taurus
ENSEBUG00000012017	lsm8	97	56.944	WBGene00003082	lsm-8	73	56.944	Caenorhabditis_elegans
ENSEBUG00000012017	lsm8	100	94.595	ENSCJAG00000046406	LSM8	100	94.595	Callithrix_jacchus
ENSEBUG00000012017	lsm8	97	93.056	ENSCAFG00000016459	LSM8	73	93.056	Canis_familiaris
ENSEBUG00000012017	lsm8	100	91.892	ENSCAFG00020007643	-	77	91.892	Canis_lupus_dingo
ENSEBUG00000012017	lsm8	100	91.892	ENSCHIG00000014201	LSM8	79	91.892	Capra_hircus
ENSEBUG00000012017	lsm8	100	91.892	ENSTSYG00000032434	LSM8	77	91.892	Carlito_syrichta
ENSEBUG00000012017	lsm8	100	93.243	ENSCAPG00000008253	LSM8	100	93.243	Cavia_aperea
ENSEBUG00000012017	lsm8	100	91.892	ENSCPOG00000035673	LSM8	77	91.892	Cavia_porcellus
ENSEBUG00000012017	lsm8	100	94.595	ENSCCAG00000021329	LSM8	100	94.595	Cebus_capucinus
ENSEBUG00000012017	lsm8	100	94.595	ENSCATG00000045302	LSM8	100	94.595	Cercocebus_atys
ENSEBUG00000012017	lsm8	100	91.892	ENSCLAG00000003726	LSM8	77	91.892	Chinchilla_lanigera
ENSEBUG00000012017	lsm8	100	90.541	ENSCSAG00000019007	-	77	90.541	Chlorocebus_sabaeus
ENSEBUG00000012017	lsm8	100	91.892	ENSCSAG00000010802	-	77	91.892	Chlorocebus_sabaeus
ENSEBUG00000012017	lsm8	100	91.892	ENSCPBG00000008154	LSM8	76	91.892	Chrysemys_picta_bellii
ENSEBUG00000012017	lsm8	100	78.378	ENSCING00000024877	-	77	78.378	Ciona_intestinalis
ENSEBUG00000012017	lsm8	100	94.595	ENSCANG00000040728	LSM8	100	94.595	Colobus_angolensis_palliatus
ENSEBUG00000012017	lsm8	100	91.892	ENSCGRG00001000450	Lsm8	77	91.892	Cricetulus_griseus_chok1gshd
ENSEBUG00000012017	lsm8	100	91.892	ENSCGRG00000005587	Lsm8	87	91.892	Cricetulus_griseus_crigri
ENSEBUG00000012017	lsm8	97	94.444	ENSCSEG00000004164	lsm8	79	94.444	Cynoglossus_semilaevis
ENSEBUG00000012017	lsm8	100	91.892	ENSCVAG00000020547	lsm8	77	91.892	Cyprinodon_variegatus
ENSEBUG00000012017	lsm8	100	91.892	ENSDARG00000091656	lsm8	77	91.892	Danio_rerio
ENSEBUG00000012017	lsm8	100	91.892	ENSDNOG00000034613	LSM8	77	91.892	Dasypus_novemcinctus
ENSEBUG00000012017	lsm8	100	91.892	ENSDORG00000027868	Lsm8	77	91.892	Dipodomys_ordii
ENSEBUG00000012017	lsm8	100	72.973	FBgn0035271	CG2021	78	72.973	Drosophila_melanogaster
ENSEBUG00000012017	lsm8	100	93.243	ENSETEG00000011594	LSM8	77	93.243	Echinops_telfairi
ENSEBUG00000012017	lsm8	100	91.892	ENSECAG00000024025	LSM8	71	94.444	Equus_caballus
ENSEBUG00000012017	lsm8	100	91.892	ENSELUG00000010138	lsm8	77	91.892	Esox_lucius
ENSEBUG00000012017	lsm8	100	91.892	ENSFCAG00000036620	-	77	91.892	Felis_catus
ENSEBUG00000012017	lsm8	89	66.667	ENSFCAG00000044794	-	65	66.667	Felis_catus
ENSEBUG00000012017	lsm8	100	93.243	ENSFALG00000010023	LSM8	77	93.243	Ficedula_albicollis
ENSEBUG00000012017	lsm8	100	91.892	ENSFDAG00000019530	LSM8	77	91.892	Fukomys_damarensis
ENSEBUG00000012017	lsm8	100	93.243	ENSFHEG00000013729	lsm8	77	93.243	Fundulus_heteroclitus
ENSEBUG00000012017	lsm8	100	93.243	ENSGALG00000009110	LSM8	77	93.243	Gallus_gallus
ENSEBUG00000012017	lsm8	100	91.892	ENSGAFG00000001135	lsm8	77	91.892	Gambusia_affinis
ENSEBUG00000012017	lsm8	100	91.892	ENSGAGG00000017366	LSM8	77	91.892	Gopherus_agassizii
ENSEBUG00000012017	lsm8	100	91.892	ENSGGOG00000041883	LSM8	77	91.892	Gorilla_gorilla
ENSEBUG00000012017	lsm8	100	93.243	ENSHBUG00000003646	lsm8	77	93.243	Haplochromis_burtoni
ENSEBUG00000012017	lsm8	62	95.652	ENSHGLG00000001988	-	67	95.652	Heterocephalus_glaber_female
ENSEBUG00000012017	lsm8	97	88.889	ENSHGLG00000019782	-	75	88.889	Heterocephalus_glaber_female
ENSEBUG00000012017	lsm8	97	91.667	ENSHGLG00100003934	-	72	91.667	Heterocephalus_glaber_male
ENSEBUG00000012017	lsm8	100	86.486	ENSHGLG00100012166	-	77	86.486	Heterocephalus_glaber_male
ENSEBUG00000012017	lsm8	100	91.892	ENSHCOG00000005037	lsm8	77	91.892	Hippocampus_comes
ENSEBUG00000012017	lsm8	100	93.243	ENSIPUG00000019811	NAA38	77	93.243	Ictalurus_punctatus
ENSEBUG00000012017	lsm8	100	91.892	ENSSTOG00000009039	LSM8	80	91.892	Ictidomys_tridecemlineatus
ENSEBUG00000012017	lsm8	100	79.730	ENSSTOG00000034801	-	69	79.730	Ictidomys_tridecemlineatus
ENSEBUG00000012017	lsm8	100	91.892	ENSJJAG00000009031	Lsm8	76	91.892	Jaculus_jaculus
ENSEBUG00000012017	lsm8	100	93.243	ENSKMAG00000018983	lsm8	77	93.243	Kryptolebias_marmoratus
ENSEBUG00000012017	lsm8	100	90.541	ENSLACG00000010231	LSM8	77	90.541	Latimeria_chalumnae
ENSEBUG00000012017	lsm8	100	91.892	ENSLOCG00000015580	lsm8	77	91.892	Lepisosteus_oculatus
ENSEBUG00000012017	lsm8	100	91.892	ENSLAFG00000011242	LSM8	76	91.892	Loxodonta_africana
ENSEBUG00000012017	lsm8	100	94.595	ENSMFAG00000035798	LSM8	100	94.595	Macaca_fascicularis
ENSEBUG00000012017	lsm8	100	89.189	ENSMFAG00000013044	-	77	89.189	Macaca_fascicularis
ENSEBUG00000012017	lsm8	100	94.595	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSEBUG00000012017	lsm8	100	89.189	ENSMNEG00000011141	-	99	89.189	Macaca_nemestrina
ENSEBUG00000012017	lsm8	100	94.595	ENSMNEG00000036764	-	100	94.595	Macaca_nemestrina
ENSEBUG00000012017	lsm8	100	94.595	ENSMLEG00000035828	-	100	94.595	Mandrillus_leucophaeus
ENSEBUG00000012017	lsm8	100	77.027	ENSMLEG00000039324	-	75	77.027	Mandrillus_leucophaeus
ENSEBUG00000012017	lsm8	100	93.243	ENSMAMG00000018839	lsm8	99	93.243	Mastacembelus_armatus
ENSEBUG00000012017	lsm8	100	93.243	ENSMZEG00005019138	lsm8	77	93.243	Maylandia_zebra
ENSEBUG00000012017	lsm8	100	93.243	ENSMGAG00000008808	LSM8	77	93.243	Meleagris_gallopavo
ENSEBUG00000012017	lsm8	100	86.486	ENSMAUG00000020287	-	100	86.486	Mesocricetus_auratus
ENSEBUG00000012017	lsm8	100	83.784	ENSMAUG00000015721	-	77	83.784	Mesocricetus_auratus
ENSEBUG00000012017	lsm8	100	70.270	ENSMAUG00000015356	-	74	70.270	Mesocricetus_auratus
ENSEBUG00000012017	lsm8	100	91.892	ENSMICG00000042730	LSM8	77	91.892	Microcebus_murinus
ENSEBUG00000012017	lsm8	100	91.892	ENSMOCG00000001688	Lsm8	77	91.892	Microtus_ochrogaster
ENSEBUG00000012017	lsm8	100	93.243	ENSMMOG00000006046	lsm8	99	93.243	Mola_mola
ENSEBUG00000012017	lsm8	95	83.333	ENSMODG00000015729	LSM8	92	83.333	Monodelphis_domestica
ENSEBUG00000012017	lsm8	100	93.243	ENSMALG00000000405	lsm8	77	93.243	Monopterus_albus
ENSEBUG00000012017	lsm8	100	91.892	MGP_CAROLIEiJ_G0028125	-	77	91.892	Mus_caroli
ENSEBUG00000012017	lsm8	100	91.892	ENSMUSG00000044155	Lsm8	77	91.892	Mus_musculus
ENSEBUG00000012017	lsm8	100	91.892	MGP_PahariEiJ_G0021881	Lsm8	99	91.892	Mus_pahari
ENSEBUG00000012017	lsm8	100	91.892	MGP_SPRETEiJ_G0029125	-	77	91.892	Mus_spretus
ENSEBUG00000012017	lsm8	100	90.541	ENSMLUG00000027762	-	77	90.541	Myotis_lucifugus
ENSEBUG00000012017	lsm8	100	91.892	ENSMLUG00000006837	-	77	91.892	Myotis_lucifugus
ENSEBUG00000012017	lsm8	100	91.892	ENSNGAG00000016554	Lsm8	77	91.892	Nannospalax_galili
ENSEBUG00000012017	lsm8	100	93.243	ENSNBRG00000014441	lsm8	77	93.243	Neolamprologus_brichardi
ENSEBUG00000012017	lsm8	100	91.892	ENSNLEG00000011768	LSM8	77	91.892	Nomascus_leucogenys
ENSEBUG00000012017	lsm8	100	78.378	ENSMEUG00000007801	LSM8	77	78.378	Notamacropus_eugenii
ENSEBUG00000012017	lsm8	100	91.892	ENSOPRG00000014809	LSM8	87	91.892	Ochotona_princeps
ENSEBUG00000012017	lsm8	100	91.892	ENSODEG00000000418	-	77	91.892	Octodon_degus
ENSEBUG00000012017	lsm8	86	76.562	ENSODEG00000020290	-	74	76.562	Octodon_degus
ENSEBUG00000012017	lsm8	100	91.892	ENSOANG00000014536	LSM8	77	91.892	Ornithorhynchus_anatinus
ENSEBUG00000012017	lsm8	100	91.892	ENSOCUG00000017359	LSM8	76	91.892	Oryctolagus_cuniculus
ENSEBUG00000012017	lsm8	97	95.833	ENSORLG00000017432	lsm8	77	95.833	Oryzias_latipes
ENSEBUG00000012017	lsm8	97	95.833	ENSORLG00020004376	lsm8	77	95.833	Oryzias_latipes_hni
ENSEBUG00000012017	lsm8	100	93.243	ENSORLG00015003757	lsm8	75	95.833	Oryzias_latipes_hsok
ENSEBUG00000012017	lsm8	93	95.652	ENSOMEG00000022509	lsm8	82	93.243	Oryzias_melastigma
ENSEBUG00000012017	lsm8	100	91.892	ENSOGAG00000013377	LSM8	77	91.892	Otolemur_garnettii
ENSEBUG00000012017	lsm8	100	91.892	ENSOARG00000017974	LSM8	77	91.892	Ovis_aries
ENSEBUG00000012017	lsm8	100	91.892	ENSPPAG00000043228	-	99	91.892	Pan_paniscus
ENSEBUG00000012017	lsm8	100	91.892	ENSPPRG00000006444	LSM8	77	91.892	Panthera_pardus
ENSEBUG00000012017	lsm8	100	91.892	ENSPTIG00000004722	LSM8	77	91.892	Panthera_tigris_altaica
ENSEBUG00000012017	lsm8	100	91.892	ENSPTRG00000046596	-	99	91.892	Pan_troglodytes
ENSEBUG00000012017	lsm8	100	87.838	ENSPANG00000019395	-	77	87.838	Papio_anubis
ENSEBUG00000012017	lsm8	100	94.595	ENSPANG00000035470	-	100	94.595	Papio_anubis
ENSEBUG00000012017	lsm8	100	91.892	ENSPKIG00000006092	lsm8	75	91.892	Paramormyrops_kingsleyae
ENSEBUG00000012017	lsm8	100	91.892	ENSPSIG00000017054	LSM8	99	91.892	Pelodiscus_sinensis
ENSEBUG00000012017	lsm8	100	93.243	ENSPMGG00000016442	lsm8	99	93.243	Periophthalmus_magnuspinnatus
ENSEBUG00000012017	lsm8	100	93.243	ENSPEMG00000009153	Lsm8	100	93.243	Peromyscus_maniculatus_bairdii
ENSEBUG00000012017	lsm8	96	92.958	ENSPCIG00000021467	LSM8	75	92.958	Phascolarctos_cinereus
ENSEBUG00000012017	lsm8	100	91.892	ENSPFOG00000012340	lsm8	77	91.892	Poecilia_formosa
ENSEBUG00000012017	lsm8	100	91.892	ENSPLAG00000000516	lsm8	77	91.892	Poecilia_latipinna
ENSEBUG00000012017	lsm8	100	91.892	ENSPMEG00000022567	lsm8	77	91.892	Poecilia_mexicana
ENSEBUG00000012017	lsm8	99	83.750	ENSPREG00000005527	lsm8	72	83.750	Poecilia_reticulata
ENSEBUG00000012017	lsm8	100	91.892	ENSPPYG00000017942	LSM8	77	91.892	Pongo_abelii
ENSEBUG00000012017	lsm8	95	70.000	ENSPCOG00000017982	-	70	70.000	Propithecus_coquereli
ENSEBUG00000012017	lsm8	100	91.892	ENSPCOG00000003309	-	77	91.892	Propithecus_coquereli
ENSEBUG00000012017	lsm8	100	90.541	ENSPVAG00000000990	LSM8	87	90.541	Pteropus_vampyrus
ENSEBUG00000012017	lsm8	100	93.243	ENSPNYG00000011448	lsm8	77	93.243	Pundamilia_nyererei
ENSEBUG00000012017	lsm8	100	93.243	ENSPNAG00000010252	lsm8	77	93.243	Pygocentrus_nattereri
ENSEBUG00000012017	lsm8	100	91.892	ENSRNOG00000058677	Lsm8	77	91.892	Rattus_norvegicus
ENSEBUG00000012017	lsm8	100	94.595	ENSRBIG00000032851	LSM8	100	94.595	Rhinopithecus_bieti
ENSEBUG00000012017	lsm8	100	94.595	ENSRROG00000039618	LSM8	100	94.595	Rhinopithecus_roxellana
ENSEBUG00000012017	lsm8	100	94.595	ENSSBOG00000023223	LSM8	100	94.595	Saimiri_boliviensis_boliviensis
ENSEBUG00000012017	lsm8	100	91.892	ENSSHAG00000018435	-	77	91.892	Sarcophilus_harrisii
ENSEBUG00000012017	lsm8	100	90.541	ENSSFOG00015004412	lsm8	77	90.541	Scleropages_formosus
ENSEBUG00000012017	lsm8	100	90.541	ENSSMAG00000009458	lsm8	99	90.541	Scophthalmus_maximus
ENSEBUG00000012017	lsm8	100	93.243	ENSSDUG00000014702	lsm8	77	93.243	Seriola_dumerili
ENSEBUG00000012017	lsm8	100	93.243	ENSSLDG00000016870	lsm8	99	93.243	Seriola_lalandi_dorsalis
ENSEBUG00000012017	lsm8	97	94.444	ENSSARG00000009628	-	100	94.444	Sorex_araneus
ENSEBUG00000012017	lsm8	100	91.892	ENSSPUG00000017419	LSM8	77	91.892	Sphenodon_punctatus
ENSEBUG00000012017	lsm8	100	93.243	ENSSPAG00000021422	lsm8	77	93.243	Stegastes_partitus
ENSEBUG00000012017	lsm8	100	91.892	ENSSSCG00000021652	LSM8	77	91.892	Sus_scrofa
ENSEBUG00000012017	lsm8	100	91.892	ENSTGUG00000016823	-	77	91.892	Taeniopygia_guttata
ENSEBUG00000012017	lsm8	100	93.243	ENSTGUG00000004730	-	77	93.243	Taeniopygia_guttata
ENSEBUG00000012017	lsm8	100	93.243	ENSTRUG00000025192	lsm8	77	93.243	Takifugu_rubripes
ENSEBUG00000012017	lsm8	100	93.243	ENSTNIG00000002864	lsm8	77	93.243	Tetraodon_nigroviridis
ENSEBUG00000012017	lsm8	100	91.892	ENSTTRG00000001023	LSM8	77	91.892	Tursiops_truncatus
ENSEBUG00000012017	lsm8	100	91.892	ENSUAMG00000006943	-	77	91.892	Ursus_americanus
ENSEBUG00000012017	lsm8	100	91.892	ENSUMAG00000003073	LSM8	79	91.892	Ursus_maritimus
ENSEBUG00000012017	lsm8	100	91.892	ENSVPAG00000001530	LSM8	77	91.892	Vicugna_pacos
ENSEBUG00000012017	lsm8	100	89.189	ENSVVUG00000013248	-	81	89.189	Vulpes_vulpes
ENSEBUG00000012017	lsm8	100	91.892	ENSXETG00000021829	lsm8	76	91.892	Xenopus_tropicalis
ENSEBUG00000012017	lsm8	100	90.541	ENSXCOG00000012938	lsm8	78	90.541	Xiphophorus_couchianus
ENSEBUG00000012017	lsm8	100	91.892	ENSXMAG00000025919	lsm8	77	91.892	Xiphophorus_maculatus