EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012098 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 42024 bases
Position: chrFYBX02009443.1:2273945-2315968
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000019459	Beta-Casp	PF10996.8	9.4e-21	1	1
ENSEBUP00000019449	Beta-Casp	PF10996.8	9.5e-21	1	1
ENSEBUP00000019459	RMMBL	PF07521.12	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020037	-	3124	-	ENSEBUP00000019459	435 (aa)	-	-
ENSEBUT00000020025	-	5526	-	ENSEBUP00000019449	421 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012098	cpsf2	93	76.471	ENSG00000165934	CPSF2	52	76.471	Homo_sapiens
ENSEBUG00000012098	cpsf2	93	76.773	ENSAPOG00000001242	cpsf2	52	76.773	Acanthochromis_polyacanthus
ENSEBUG00000012098	cpsf2	54	82.895	ENSAMEG00000014835	-	60	82.895	Ailuropoda_melanoleuca
ENSEBUG00000012098	cpsf2	93	76.829	ENSACIG00000009331	cpsf2	52	76.829	Amphilophus_citrinellus
ENSEBUG00000012098	cpsf2	93	76.284	ENSAOCG00000014095	cpsf2	52	76.284	Amphiprion_ocellaris
ENSEBUG00000012098	cpsf2	93	76.284	ENSAPEG00000009158	cpsf2	52	76.284	Amphiprion_percula
ENSEBUG00000012098	cpsf2	93	76.039	ENSATEG00000017644	cpsf2	62	74.933	Anabas_testudineus
ENSEBUG00000012098	cpsf2	93	75.795	ENSAPLG00000006330	CPSF2	52	75.795	Anas_platyrhynchos
ENSEBUG00000012098	cpsf2	93	75.735	ENSACAG00000009245	CPSF2	52	75.735	Anolis_carolinensis
ENSEBUG00000012098	cpsf2	93	76.471	ENSANAG00000022915	CPSF2	52	76.471	Aotus_nancymaae
ENSEBUG00000012098	cpsf2	93	76.773	ENSAMXG00000018696	cpsf2	62	75.269	Astyanax_mexicanus
ENSEBUG00000012098	cpsf2	93	76.471	ENSBTAG00000010227	CPSF2	52	76.471	Bos_taurus
ENSEBUG00000012098	cpsf2	93	42.637	WBGene00017313	cpsf-2	53	42.539	Caenorhabditis_elegans
ENSEBUG00000012098	cpsf2	93	76.471	ENSCJAG00000018069	CPSF2	52	76.471	Callithrix_jacchus
ENSEBUG00000012098	cpsf2	93	76.225	ENSCAFG00000010909	CPSF2	52	76.225	Canis_familiaris
ENSEBUG00000012098	cpsf2	93	76.225	ENSCAFG00020020670	CPSF2	58	76.225	Canis_lupus_dingo
ENSEBUG00000012098	cpsf2	93	76.471	ENSCHIG00000023848	CPSF2	52	76.471	Capra_hircus
ENSEBUG00000012098	cpsf2	93	76.225	ENSTSYG00000009036	CPSF2	52	76.225	Carlito_syrichta
ENSEBUG00000012098	cpsf2	93	76.471	ENSCPOG00000010899	CPSF2	52	76.471	Cavia_porcellus
ENSEBUG00000012098	cpsf2	93	76.471	ENSCCAG00000028088	CPSF2	52	76.471	Cebus_capucinus
ENSEBUG00000012098	cpsf2	93	76.471	ENSCATG00000030132	CPSF2	52	76.471	Cercocebus_atys
ENSEBUG00000012098	cpsf2	93	76.471	ENSCLAG00000012404	CPSF2	52	76.471	Chinchilla_lanigera
ENSEBUG00000012098	cpsf2	93	76.471	ENSCSAG00000011300	CPSF2	52	76.471	Chlorocebus_sabaeus
ENSEBUG00000012098	cpsf2	93	77.206	ENSCPBG00000008766	CPSF2	51	77.206	Chrysemys_picta_bellii
ENSEBUG00000012098	cpsf2	93	54.976	ENSCING00000007881	-	53	54.976	Ciona_intestinalis
ENSEBUG00000012098	cpsf2	93	76.471	ENSCANG00000041651	CPSF2	56	76.471	Colobus_angolensis_palliatus
ENSEBUG00000012098	cpsf2	93	75.980	ENSCGRG00001006901	Cpsf2	52	75.980	Cricetulus_griseus_chok1gshd
ENSEBUG00000012098	cpsf2	93	75.980	ENSCGRG00000012416	Cpsf2	52	75.980	Cricetulus_griseus_crigri
ENSEBUG00000012098	cpsf2	93	76.773	ENSCSEG00000004116	cpsf2	52	76.773	Cynoglossus_semilaevis
ENSEBUG00000012098	cpsf2	93	76.039	ENSCVAG00000000095	cpsf2	52	76.039	Cyprinodon_variegatus
ENSEBUG00000012098	cpsf2	93	76.284	ENSDARG00000028971	cpsf2	60	74.487	Danio_rerio
ENSEBUG00000012098	cpsf2	93	76.471	ENSDNOG00000042757	CPSF2	52	76.471	Dasypus_novemcinctus
ENSEBUG00000012098	cpsf2	93	76.471	ENSDORG00000013709	Cpsf2	52	76.471	Dipodomys_ordii
ENSEBUG00000012098	cpsf2	93	53.647	FBgn0027873	Cpsf100	55	52.706	Drosophila_melanogaster
ENSEBUG00000012098	cpsf2	93	76.471	ENSECAG00000023935	CPSF2	52	76.471	Equus_caballus
ENSEBUG00000012098	cpsf2	93	77.317	ENSELUG00000008442	cpsf2	52	77.317	Esox_lucius
ENSEBUG00000012098	cpsf2	93	76.471	ENSFCAG00000007886	CPSF2	52	76.471	Felis_catus
ENSEBUG00000012098	cpsf2	93	76.471	ENSFALG00000002412	CPSF2	52	76.471	Ficedula_albicollis
ENSEBUG00000012098	cpsf2	93	76.225	ENSFDAG00000006327	CPSF2	52	76.225	Fukomys_damarensis
ENSEBUG00000012098	cpsf2	93	76.039	ENSFHEG00000015465	cpsf2	53	76.039	Fundulus_heteroclitus
ENSEBUG00000012098	cpsf2	93	77.751	ENSGMOG00000008761	cpsf2	52	77.751	Gadus_morhua
ENSEBUG00000012098	cpsf2	93	76.225	ENSGALG00000010783	CPSF2	52	76.225	Gallus_gallus
ENSEBUG00000012098	cpsf2	93	75.795	ENSGAFG00000001407	cpsf2	52	75.795	Gambusia_affinis
ENSEBUG00000012098	cpsf2	93	76.528	ENSGACG00000008418	cpsf2	65	76.528	Gasterosteus_aculeatus
ENSEBUG00000012098	cpsf2	93	76.961	ENSGAGG00000008287	CPSF2	54	76.961	Gopherus_agassizii
ENSEBUG00000012098	cpsf2	93	76.471	ENSGGOG00000011799	CPSF2	52	76.471	Gorilla_gorilla
ENSEBUG00000012098	cpsf2	93	77.262	ENSHBUG00000023466	cpsf2	52	77.262	Haplochromis_burtoni
ENSEBUG00000012098	cpsf2	93	76.225	ENSHGLG00000018311	CPSF2	52	76.225	Heterocephalus_glaber_female
ENSEBUG00000012098	cpsf2	93	76.225	ENSHGLG00100016460	CPSF2	52	76.225	Heterocephalus_glaber_male
ENSEBUG00000012098	cpsf2	93	75.795	ENSHCOG00000019527	cpsf2	51	75.795	Hippocampus_comes
ENSEBUG00000012098	cpsf2	93	78.240	ENSIPUG00000020857	cpsf2	52	78.240	Ictalurus_punctatus
ENSEBUG00000012098	cpsf2	93	76.471	ENSSTOG00000009528	CPSF2	52	76.471	Ictidomys_tridecemlineatus
ENSEBUG00000012098	cpsf2	93	76.225	ENSJJAG00000017925	Cpsf2	52	76.225	Jaculus_jaculus
ENSEBUG00000012098	cpsf2	93	76.284	ENSKMAG00000019429	cpsf2	52	76.284	Kryptolebias_marmoratus
ENSEBUG00000012098	cpsf2	93	75.550	ENSLBEG00000011585	cpsf2	56	75.550	Labrus_bergylta
ENSEBUG00000012098	cpsf2	93	76.716	ENSLACG00000019024	CPSF2	52	76.716	Latimeria_chalumnae
ENSEBUG00000012098	cpsf2	93	77.017	ENSLOCG00000014102	cpsf2	52	77.017	Lepisosteus_oculatus
ENSEBUG00000012098	cpsf2	93	76.471	ENSLAFG00000004891	CPSF2	52	76.471	Loxodonta_africana
ENSEBUG00000012098	cpsf2	93	76.471	ENSMFAG00000041212	CPSF2	52	76.471	Macaca_fascicularis
ENSEBUG00000012098	cpsf2	93	76.471	ENSMMUG00000000699	CPSF2	52	76.471	Macaca_mulatta
ENSEBUG00000012098	cpsf2	93	76.471	ENSMNEG00000031584	CPSF2	52	76.471	Macaca_nemestrina
ENSEBUG00000012098	cpsf2	93	76.471	ENSMLEG00000029394	CPSF2	52	76.471	Mandrillus_leucophaeus
ENSEBUG00000012098	cpsf2	93	75.550	ENSMAMG00000004235	cpsf2	52	75.550	Mastacembelus_armatus
ENSEBUG00000012098	cpsf2	93	77.262	ENSMZEG00005001769	cpsf2	52	77.262	Maylandia_zebra
ENSEBUG00000012098	cpsf2	93	76.225	ENSMGAG00000013122	CPSF2	52	76.225	Meleagris_gallopavo
ENSEBUG00000012098	cpsf2	93	75.980	ENSMAUG00000015160	Cpsf2	52	75.980	Mesocricetus_auratus
ENSEBUG00000012098	cpsf2	93	76.471	ENSMICG00000016441	CPSF2	52	76.471	Microcebus_murinus
ENSEBUG00000012098	cpsf2	93	75.980	ENSMOCG00000015372	Cpsf2	52	75.980	Microtus_ochrogaster
ENSEBUG00000012098	cpsf2	93	75.061	ENSMMOG00000015590	cpsf2	53	75.061	Mola_mola
ENSEBUG00000012098	cpsf2	93	76.716	ENSMODG00000002042	CPSF2	52	76.716	Monodelphis_domestica
ENSEBUG00000012098	cpsf2	93	72.372	ENSMALG00000022275	cpsf2	52	72.372	Monopterus_albus
ENSEBUG00000012098	cpsf2	93	75.980	ENSMUSG00000041781	Cpsf2	52	75.980	Mus_musculus
ENSEBUG00000012098	cpsf2	93	75.980	MGP_PahariEiJ_G0029791	Cpsf2	52	75.980	Mus_pahari
ENSEBUG00000012098	cpsf2	93	75.980	MGP_SPRETEiJ_G0018877	Cpsf2	52	75.980	Mus_spretus
ENSEBUG00000012098	cpsf2	93	76.471	ENSMPUG00000007617	CPSF2	51	76.471	Mustela_putorius_furo
ENSEBUG00000012098	cpsf2	93	76.716	ENSMLUG00000005570	CPSF2	52	76.716	Myotis_lucifugus
ENSEBUG00000012098	cpsf2	93	76.225	ENSNGAG00000020312	Cpsf2	52	76.225	Nannospalax_galili
ENSEBUG00000012098	cpsf2	93	77.262	ENSNBRG00000022402	cpsf2	52	77.262	Neolamprologus_brichardi
ENSEBUG00000012098	cpsf2	93	75.000	ENSNLEG00000017132	CPSF2	52	75.000	Nomascus_leucogenys
ENSEBUG00000012098	cpsf2	93	76.225	ENSOPRG00000008484	-	56	76.225	Ochotona_princeps
ENSEBUG00000012098	cpsf2	93	76.471	ENSODEG00000008682	CPSF2	52	76.471	Octodon_degus
ENSEBUG00000012098	cpsf2	93	77.262	ENSONIG00000005901	cpsf2	52	77.262	Oreochromis_niloticus
ENSEBUG00000012098	cpsf2	93	76.471	ENSOANG00000003822	CPSF2	52	76.471	Ornithorhynchus_anatinus
ENSEBUG00000012098	cpsf2	93	76.225	ENSOCUG00000005713	CPSF2	52	76.225	Oryctolagus_cuniculus
ENSEBUG00000012098	cpsf2	93	77.262	ENSORLG00000011628	cpsf2	55	77.262	Oryzias_latipes
ENSEBUG00000012098	cpsf2	93	77.262	ENSORLG00020016980	cpsf2	52	77.262	Oryzias_latipes_hni
ENSEBUG00000012098	cpsf2	93	77.262	ENSORLG00015011910	cpsf2	52	77.262	Oryzias_latipes_hsok
ENSEBUG00000012098	cpsf2	93	77.017	ENSOMEG00000022876	cpsf2	52	77.017	Oryzias_melastigma
ENSEBUG00000012098	cpsf2	93	71.078	ENSOARG00000012889	CPSF2	51	71.078	Ovis_aries
ENSEBUG00000012098	cpsf2	93	76.471	ENSPPAG00000039666	CPSF2	52	76.471	Pan_paniscus
ENSEBUG00000012098	cpsf2	93	76.471	ENSPPRG00000010869	CPSF2	52	76.471	Panthera_pardus
ENSEBUG00000012098	cpsf2	93	76.471	ENSPTIG00000021202	CPSF2	52	76.471	Panthera_tigris_altaica
ENSEBUG00000012098	cpsf2	93	76.471	ENSPTRG00000006651	CPSF2	52	76.471	Pan_troglodytes
ENSEBUG00000012098	cpsf2	93	76.471	ENSPANG00000017417	CPSF2	52	76.471	Papio_anubis
ENSEBUG00000012098	cpsf2	93	78.973	ENSPKIG00000021453	cpsf2	55	78.973	Paramormyrops_kingsleyae
ENSEBUG00000012098	cpsf2	93	76.471	ENSPSIG00000006289	CPSF2	52	76.471	Pelodiscus_sinensis
ENSEBUG00000012098	cpsf2	85	72.849	ENSPMGG00000002511	cpsf2	62	72.849	Periophthalmus_magnuspinnatus
ENSEBUG00000012098	cpsf2	93	75.980	ENSPEMG00000007917	Cpsf2	52	75.980	Peromyscus_maniculatus_bairdii
ENSEBUG00000012098	cpsf2	93	79.557	ENSPMAG00000006205	cpsf2	51	79.557	Petromyzon_marinus
ENSEBUG00000012098	cpsf2	93	76.716	ENSPCIG00000011393	CPSF2	56	76.716	Phascolarctos_cinereus
ENSEBUG00000012098	cpsf2	93	75.795	ENSPFOG00000018648	cpsf2	52	75.795	Poecilia_formosa
ENSEBUG00000012098	cpsf2	93	75.795	ENSPLAG00000019199	cpsf2	52	75.795	Poecilia_latipinna
ENSEBUG00000012098	cpsf2	93	76.039	ENSPMEG00000012100	cpsf2	55	76.039	Poecilia_mexicana
ENSEBUG00000012098	cpsf2	93	76.284	ENSPREG00000008960	cpsf2	52	76.284	Poecilia_reticulata
ENSEBUG00000012098	cpsf2	63	70.909	ENSPPYG00000029685	-	55	70.909	Pongo_abelii
ENSEBUG00000012098	cpsf2	93	76.471	ENSPCAG00000012477	CPSF2	52	76.471	Procavia_capensis
ENSEBUG00000012098	cpsf2	93	76.471	ENSPCOG00000026387	CPSF2	52	76.471	Propithecus_coquereli
ENSEBUG00000012098	cpsf2	93	76.829	ENSPNYG00000023356	cpsf2	52	76.829	Pundamilia_nyererei
ENSEBUG00000012098	cpsf2	93	77.506	ENSPNAG00000001849	cpsf2	52	77.506	Pygocentrus_nattereri
ENSEBUG00000012098	cpsf2	93	75.490	ENSRNOG00000005733	Cpsf2	52	75.490	Rattus_norvegicus
ENSEBUG00000012098	cpsf2	93	76.471	ENSRBIG00000044792	CPSF2	52	76.471	Rhinopithecus_bieti
ENSEBUG00000012098	cpsf2	93	76.471	ENSRROG00000034875	CPSF2	52	76.471	Rhinopithecus_roxellana
ENSEBUG00000012098	cpsf2	93	76.471	ENSSBOG00000024571	CPSF2	52	76.471	Saimiri_boliviensis_boliviensis
ENSEBUG00000012098	cpsf2	93	76.716	ENSSHAG00000010458	CPSF2	52	76.716	Sarcophilus_harrisii
ENSEBUG00000012098	cpsf2	93	77.751	ENSSFOG00015002117	cpsf2	52	77.751	Scleropages_formosus
ENSEBUG00000012098	cpsf2	95	75.060	ENSSMAG00000002001	cpsf2	53	75.060	Scophthalmus_maximus
ENSEBUG00000012098	cpsf2	93	76.039	ENSSDUG00000004084	cpsf2	52	76.039	Seriola_dumerili
ENSEBUG00000012098	cpsf2	93	75.550	ENSSLDG00000024330	cpsf2	52	75.550	Seriola_lalandi_dorsalis
ENSEBUG00000012098	cpsf2	93	76.413	ENSSPUG00000013485	CPSF2	52	76.413	Sphenodon_punctatus
ENSEBUG00000012098	cpsf2	93	76.773	ENSSPAG00000013284	cpsf2	52	76.773	Stegastes_partitus
ENSEBUG00000012098	cpsf2	93	76.225	ENSSSCG00000002447	CPSF2	52	76.225	Sus_scrofa
ENSEBUG00000012098	cpsf2	93	76.225	ENSTGUG00000012571	-	52	76.225	Taeniopygia_guttata
ENSEBUG00000012098	cpsf2	93	76.284	ENSTRUG00000003742	cpsf2	55	76.284	Takifugu_rubripes
ENSEBUG00000012098	cpsf2	93	74.209	ENSTNIG00000012228	cpsf2	52	76.156	Tetraodon_nigroviridis
ENSEBUG00000012098	cpsf2	93	76.225	ENSTBEG00000004530	CPSF2	54	76.225	Tupaia_belangeri
ENSEBUG00000012098	cpsf2	93	75.490	ENSTTRG00000008697	CPSF2	52	75.490	Tursiops_truncatus
ENSEBUG00000012098	cpsf2	93	76.471	ENSUAMG00000028071	CPSF2	52	76.471	Ursus_americanus
ENSEBUG00000012098	cpsf2	93	76.471	ENSUMAG00000005029	CPSF2	52	76.471	Ursus_maritimus
ENSEBUG00000012098	cpsf2	93	76.225	ENSVPAG00000003503	CPSF2	52	76.225	Vicugna_pacos
ENSEBUG00000012098	cpsf2	93	76.225	ENSVVUG00000024642	CPSF2	52	76.225	Vulpes_vulpes
ENSEBUG00000012098	cpsf2	93	75.000	ENSXETG00000010289	cpsf2	52	75.000	Xenopus_tropicalis
ENSEBUG00000012098	cpsf2	93	75.795	ENSXCOG00000001764	cpsf2	52	75.795	Xiphophorus_couchianus
ENSEBUG00000012098	cpsf2	93	76.039	ENSXMAG00000017048	cpsf2	52	76.039	Xiphophorus_maculatus