EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012149 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 5416 bases
Position: chrFYBX02010787.1:1117184-1122599
Accession: ZDB-GENE-120411-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000019566	PseudoU_synth_2	PF00849.22	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020142	-	1455	-	ENSEBUP00000019566	484 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012149	rpusd2	97	33.603	ENSG00000166133	RPUSD2	77	35.047	Homo_sapiens
ENSEBUG00000012149	rpusd2	83	33.560	ENSAPOG00000000817	rpusd2	76	33.560	Acanthochromis_polyacanthus
ENSEBUG00000012149	rpusd2	94	33.755	ENSAMEG00000016996	RPUSD2	77	35.514	Ailuropoda_melanoleuca
ENSEBUG00000012149	rpusd2	83	34.332	ENSACIG00000024029	rpusd2	83	34.332	Amphilophus_citrinellus
ENSEBUG00000012149	rpusd2	83	33.710	ENSAOCG00000015237	rpusd2	76	33.710	Amphiprion_ocellaris
ENSEBUG00000012149	rpusd2	83	33.937	ENSAPEG00000021763	rpusd2	76	33.937	Amphiprion_percula
ENSEBUG00000012149	rpusd2	83	33.260	ENSATEG00000015242	rpusd2	75	33.260	Anabas_testudineus
ENSEBUG00000012149	rpusd2	83	31.935	ENSAPLG00000004723	RPUSD2	98	31.935	Anas_platyrhynchos
ENSEBUG00000012149	rpusd2	83	36.490	ENSACAG00000013893	RPUSD2	94	34.468	Anolis_carolinensis
ENSEBUG00000012149	rpusd2	84	34.793	ENSANAG00000009691	RPUSD2	77	34.793	Aotus_nancymaae
ENSEBUG00000012149	rpusd2	83	35.281	ENSACLG00000019531	rpusd2	76	35.281	Astatotilapia_calliptera
ENSEBUG00000012149	rpusd2	78	39.350	ENSAMXG00000013376	rpusd2	77	33.191	Astyanax_mexicanus
ENSEBUG00000012149	rpusd2	84	35.797	ENSBTAG00000003193	RPUSD2	76	35.797	Bos_taurus
ENSEBUG00000012149	rpusd2	98	33.200	ENSCJAG00000020841	RPUSD2	77	34.642	Callithrix_jacchus
ENSEBUG00000012149	rpusd2	90	34.267	ENSCAFG00000009165	RPUSD2	76	35.335	Canis_familiaris
ENSEBUG00000012149	rpusd2	90	34.267	ENSCAFG00020005849	RPUSD2	76	35.335	Canis_lupus_dingo
ENSEBUG00000012149	rpusd2	89	34.261	ENSCHIG00000006152	RPUSD2	76	35.335	Capra_hircus
ENSEBUG00000012149	rpusd2	89	34.690	ENSTSYG00000012844	RPUSD2	77	36.028	Carlito_syrichta
ENSEBUG00000012149	rpusd2	85	35.484	ENSCPOG00000013201	RPUSD2	77	35.484	Cavia_porcellus
ENSEBUG00000012149	rpusd2	84	34.793	ENSCCAG00000024378	RPUSD2	77	34.793	Cebus_capucinus
ENSEBUG00000012149	rpusd2	84	35.104	ENSCATG00000043734	RPUSD2	77	35.104	Cercocebus_atys
ENSEBUG00000012149	rpusd2	94	35.246	ENSCLAG00000011862	RPUSD2	77	36.806	Chinchilla_lanigera
ENSEBUG00000012149	rpusd2	84	35.104	ENSCSAG00000007538	RPUSD2	82	35.104	Chlorocebus_sabaeus
ENSEBUG00000012149	rpusd2	67	33.528	ENSCHOG00000004834	RPUSD2	62	34.770	Choloepus_hoffmanni
ENSEBUG00000012149	rpusd2	64	59.574	ENSCPBG00000013419	RPUSD2	59	59.574	Chrysemys_picta_bellii
ENSEBUG00000012149	rpusd2	71	30.252	ENSCSAVG00000007812	-	99	30.252	Ciona_savignyi
ENSEBUG00000012149	rpusd2	89	34.047	ENSCANG00000003659	RPUSD2	77	35.335	Colobus_angolensis_palliatus
ENSEBUG00000012149	rpusd2	84	35.831	ENSCGRG00001009839	Rpusd2	73	35.831	Cricetulus_griseus_chok1gshd
ENSEBUG00000012149	rpusd2	84	35.831	ENSCGRG00000012348	Rpusd2	75	35.831	Cricetulus_griseus_crigri
ENSEBUG00000012149	rpusd2	83	35.321	ENSCSEG00000001953	rpusd2	74	35.321	Cynoglossus_semilaevis
ENSEBUG00000012149	rpusd2	83	35.484	ENSCVAG00000010848	rpusd2	75	35.484	Cyprinodon_variegatus
ENSEBUG00000012149	rpusd2	54	38.686	ENSDARG00000060992	rpusd2	73	34.318	Danio_rerio
ENSEBUG00000012149	rpusd2	86	33.867	ENSDNOG00000047745	RPUSD2	78	33.867	Dasypus_novemcinctus
ENSEBUG00000012149	rpusd2	84	36.512	ENSDORG00000009092	Rpusd2	97	36.512	Dipodomys_ordii
ENSEBUG00000012149	rpusd2	83	35.831	FBgn0032256	RluA-2	76	35.831	Drosophila_melanogaster
ENSEBUG00000012149	rpusd2	86	36.446	ENSETEG00000008581	RPUSD2	79	36.446	Echinops_telfairi
ENSEBUG00000012149	rpusd2	84	34.873	ENSEASG00005016463	RPUSD2	75	34.873	Equus_asinus_asinus
ENSEBUG00000012149	rpusd2	84	35.335	ENSECAG00000024178	RPUSD2	75	35.335	Equus_caballus
ENSEBUG00000012149	rpusd2	84	30.649	ENSEEUG00000005132	RPUSD2	79	30.649	Erinaceus_europaeus
ENSEBUG00000012149	rpusd2	83	35.321	ENSELUG00000016786	rpusd2	77	35.321	Esox_lucius
ENSEBUG00000012149	rpusd2	94	33.820	ENSFCAG00000040796	RPUSD2	76	35.335	Felis_catus
ENSEBUG00000012149	rpusd2	84	35.104	ENSFALG00000001122	RPUSD2	92	35.104	Ficedula_albicollis
ENSEBUG00000012149	rpusd2	85	35.035	ENSFDAG00000003070	RPUSD2	82	35.035	Fukomys_damarensis
ENSEBUG00000012149	rpusd2	83	34.259	ENSFHEG00000007518	rpusd2	76	34.259	Fundulus_heteroclitus
ENSEBUG00000012149	rpusd2	83	32.952	ENSGMOG00000011014	rpusd2	87	33.181	Gadus_morhua
ENSEBUG00000012149	rpusd2	92	31.967	ENSGALG00000041216	RPUSD2	89	32.353	Gallus_gallus
ENSEBUG00000012149	rpusd2	83	33.649	ENSGAFG00000003390	rpusd2	74	33.649	Gambusia_affinis
ENSEBUG00000012149	rpusd2	83	32.886	ENSGACG00000008656	rpusd2	84	32.886	Gasterosteus_aculeatus
ENSEBUG00000012149	rpusd2	83	34.507	ENSGAGG00000013098	RPUSD2	80	34.507	Gopherus_agassizii
ENSEBUG00000012149	rpusd2	96	34.012	ENSGGOG00000006684	RPUSD2	77	35.047	Gorilla_gorilla
ENSEBUG00000012149	rpusd2	83	35.281	ENSHBUG00000023777	rpusd2	76	35.281	Haplochromis_burtoni
ENSEBUG00000012149	rpusd2	94	33.610	ENSHGLG00000012765	RPUSD2	77	35.035	Heterocephalus_glaber_female
ENSEBUG00000012149	rpusd2	94	33.610	ENSHGLG00100006653	RPUSD2	77	35.035	Heterocephalus_glaber_male
ENSEBUG00000012149	rpusd2	83	34.174	ENSHCOG00000015587	rpusd2	74	34.174	Hippocampus_comes
ENSEBUG00000012149	rpusd2	83	35.147	ENSIPUG00000021006	rpusd2	73	35.147	Ictalurus_punctatus
ENSEBUG00000012149	rpusd2	90	34.120	ENSSTOG00000025619	RPUSD2	76	34.831	Ictidomys_tridecemlineatus
ENSEBUG00000012149	rpusd2	84	36.512	ENSJJAG00000023160	Rpusd2	78	36.279	Jaculus_jaculus
ENSEBUG00000012149	rpusd2	83	35.491	ENSKMAG00000006618	rpusd2	75	35.491	Kryptolebias_marmoratus
ENSEBUG00000012149	rpusd2	83	36.054	ENSLBEG00000021571	rpusd2	75	36.281	Labrus_bergylta
ENSEBUG00000012149	rpusd2	83	34.452	ENSLACG00000017338	RPUSD2	96	34.452	Latimeria_chalumnae
ENSEBUG00000012149	rpusd2	83	36.239	ENSLOCG00000014755	rpusd2	84	36.239	Lepisosteus_oculatus
ENSEBUG00000012149	rpusd2	84	36.175	ENSLAFG00000015588	RPUSD2	79	36.175	Loxodonta_africana
ENSEBUG00000012149	rpusd2	84	35.104	ENSMFAG00000045062	RPUSD2	77	35.104	Macaca_fascicularis
ENSEBUG00000012149	rpusd2	96	34.012	ENSMMUG00000001483	RPUSD2	77	35.104	Macaca_mulatta
ENSEBUG00000012149	rpusd2	89	31.838	ENSMNEG00000041429	RPUSD2	77	32.658	Macaca_nemestrina
ENSEBUG00000012149	rpusd2	67	35.817	ENSMLEG00000036551	RPUSD2	80	35.817	Mandrillus_leucophaeus
ENSEBUG00000012149	rpusd2	83	32.397	ENSMAMG00000001077	rpusd2	75	32.397	Mastacembelus_armatus
ENSEBUG00000012149	rpusd2	83	35.281	ENSMZEG00005006947	rpusd2	84	35.281	Maylandia_zebra
ENSEBUG00000012149	rpusd2	92	33.546	ENSMGAG00000003058	RPUSD2	91	34.742	Meleagris_gallopavo
ENSEBUG00000012149	rpusd2	84	36.744	ENSMAUG00000020467	Rpusd2	75	36.744	Mesocricetus_auratus
ENSEBUG00000012149	rpusd2	94	33.130	ENSMICG00000028637	RPUSD2	77	35.104	Microcebus_murinus
ENSEBUG00000012149	rpusd2	84	36.195	ENSMOCG00000020061	Rpusd2	75	36.195	Microtus_ochrogaster
ENSEBUG00000012149	rpusd2	83	35.116	ENSMMOG00000012020	rpusd2	75	35.116	Mola_mola
ENSEBUG00000012149	rpusd2	83	34.588	ENSMODG00000000300	RPUSD2	76	34.588	Monodelphis_domestica
ENSEBUG00000012149	rpusd2	83	33.115	ENSMALG00000010024	rpusd2	75	33.115	Monopterus_albus
ENSEBUG00000012149	rpusd2	89	34.490	MGP_CAROLIEiJ_G0024130	Rpusd2	75	35.469	Mus_caroli
ENSEBUG00000012149	rpusd2	89	34.273	ENSMUSG00000027324	Rpusd2	75	35.240	Mus_musculus
ENSEBUG00000012149	rpusd2	89	35.065	MGP_PahariEiJ_G0025573	Rpusd2	75	36.073	Mus_pahari
ENSEBUG00000012149	rpusd2	89	34.490	MGP_SPRETEiJ_G0025046	Rpusd2	76	35.469	Mus_spretus
ENSEBUG00000012149	rpusd2	94	33.615	ENSMPUG00000008517	RPUSD2	76	34.783	Mustela_putorius_furo
ENSEBUG00000012149	rpusd2	84	35.335	ENSMLUG00000007971	RPUSD2	83	35.335	Myotis_lucifugus
ENSEBUG00000012149	rpusd2	83	35.071	ENSNGAG00000014126	Rpusd2	76	35.071	Nannospalax_galili
ENSEBUG00000012149	rpusd2	83	34.713	ENSNBRG00000010070	rpusd2	75	34.713	Neolamprologus_brichardi
ENSEBUG00000012149	rpusd2	96	33.538	ENSNLEG00000035735	RPUSD2	77	34.813	Nomascus_leucogenys
ENSEBUG00000012149	rpusd2	83	35.294	ENSMEUG00000008500	RPUSD2	79	35.294	Notamacropus_eugenii
ENSEBUG00000012149	rpusd2	89	34.924	ENSOPRG00000014177	-	77	34.096	Ochotona_princeps
ENSEBUG00000012149	rpusd2	94	34.426	ENSODEG00000017193	RPUSD2	78	36.131	Octodon_degus
ENSEBUG00000012149	rpusd2	83	34.732	ENSONIG00000020102	rpusd2	83	34.732	Oreochromis_niloticus
ENSEBUG00000012149	rpusd2	50	39.844	ENSOANG00000011262	-	97	39.844	Ornithorhynchus_anatinus
ENSEBUG00000012149	rpusd2	89	34.884	ENSOCUG00000015745	RPUSD2	75	35.857	Oryctolagus_cuniculus
ENSEBUG00000012149	rpusd2	84	35.011	ENSORLG00000015516	rpusd2	77	35.011	Oryzias_latipes
ENSEBUG00000012149	rpusd2	84	35.211	ENSORLG00020010533	rpusd2	77	34.742	Oryzias_latipes_hni
ENSEBUG00000012149	rpusd2	84	35.011	ENSORLG00015009206	rpusd2	76	35.011	Oryzias_latipes_hsok
ENSEBUG00000012149	rpusd2	84	34.346	ENSOMEG00000007355	rpusd2	69	34.579	Oryzias_melastigma
ENSEBUG00000012149	rpusd2	84	35.731	ENSOGAG00000004867	RPUSD2	80	35.731	Otolemur_garnettii
ENSEBUG00000012149	rpusd2	84	34.873	ENSOARG00000020235	RPUSD2	77	34.873	Ovis_aries
ENSEBUG00000012149	rpusd2	96	33.605	ENSPPAG00000032874	RPUSD2	77	35.047	Pan_paniscus
ENSEBUG00000012149	rpusd2	94	33.612	ENSPPRG00000010446	RPUSD2	77	35.104	Panthera_pardus
ENSEBUG00000012149	rpusd2	94	33.612	ENSPTIG00000013316	RPUSD2	77	35.104	Panthera_tigris_altaica
ENSEBUG00000012149	rpusd2	96	33.605	ENSPTRG00000006924	RPUSD2	77	35.047	Pan_troglodytes
ENSEBUG00000012149	rpusd2	89	33.833	ENSPANG00000019339	RPUSD2	77	35.104	Papio_anubis
ENSEBUG00000012149	rpusd2	68	61.702	ENSPKIG00000023017	rpusd2	50	61.702	Paramormyrops_kingsleyae
ENSEBUG00000012149	rpusd2	67	34.358	ENSPSIG00000012680	RPUSD2	99	34.358	Pelodiscus_sinensis
ENSEBUG00000012149	rpusd2	83	33.813	ENSPMGG00000018165	rpusd2	72	33.813	Periophthalmus_magnuspinnatus
ENSEBUG00000012149	rpusd2	84	36.047	ENSPEMG00000012878	Rpusd2	78	36.047	Peromyscus_maniculatus_bairdii
ENSEBUG00000012149	rpusd2	83	35.952	ENSPCIG00000023199	RPUSD2	75	35.952	Phascolarctos_cinereus
ENSEBUG00000012149	rpusd2	83	34.346	ENSPFOG00000006829	rpusd2	74	34.346	Poecilia_formosa
ENSEBUG00000012149	rpusd2	83	34.346	ENSPLAG00000022914	rpusd2	84	34.346	Poecilia_latipinna
ENSEBUG00000012149	rpusd2	83	34.346	ENSPMEG00000009835	rpusd2	84	34.346	Poecilia_mexicana
ENSEBUG00000012149	rpusd2	83	34.906	ENSPREG00000016441	rpusd2	72	34.906	Poecilia_reticulata
ENSEBUG00000012149	rpusd2	96	33.809	ENSPPYG00000006355	RPUSD2	77	35.280	Pongo_abelii
ENSEBUG00000012149	rpusd2	84	34.266	ENSPCOG00000028019	RPUSD2	77	34.266	Propithecus_coquereli
ENSEBUG00000012149	rpusd2	96	33.874	ENSPVAG00000001837	RPUSD2	86	33.874	Pteropus_vampyrus
ENSEBUG00000012149	rpusd2	83	35.697	ENSPNYG00000021507	rpusd2	82	35.697	Pundamilia_nyererei
ENSEBUG00000012149	rpusd2	89	34.924	ENSRNOG00000010528	LOC100911166	75	35.927	Rattus_norvegicus
ENSEBUG00000012149	rpusd2	89	34.924	ENSRNOG00000046797	Rpusd2	75	35.927	Rattus_norvegicus
ENSEBUG00000012149	rpusd2	96	34.216	ENSRBIG00000030813	RPUSD2	77	35.335	Rhinopithecus_bieti
ENSEBUG00000012149	rpusd2	96	34.216	ENSRROG00000026664	RPUSD2	77	35.335	Rhinopithecus_roxellana
ENSEBUG00000012149	rpusd2	89	33.833	ENSSBOG00000035031	RPUSD2	77	34.873	Saimiri_boliviensis_boliviensis
ENSEBUG00000012149	rpusd2	67	35.072	ENSSHAG00000015108	RPUSD2	89	35.072	Sarcophilus_harrisii
ENSEBUG00000012149	rpusd2	83	35.189	ENSSMAG00000000903	rpusd2	83	35.189	Scophthalmus_maximus
ENSEBUG00000012149	rpusd2	83	32.974	ENSSDUG00000019139	rpusd2	76	32.974	Seriola_dumerili
ENSEBUG00000012149	rpusd2	83	33.262	ENSSLDG00000005938	rpusd2	76	33.262	Seriola_lalandi_dorsalis
ENSEBUG00000012149	rpusd2	86	35.160	ENSSARG00000002792	RPUSD2	77	35.160	Sorex_araneus
ENSEBUG00000012149	rpusd2	83	32.028	ENSSPUG00000001206	RPUSD2	83	32.634	Sphenodon_punctatus
ENSEBUG00000012149	rpusd2	83	35.294	ENSSPAG00000003578	rpusd2	76	35.294	Stegastes_partitus
ENSEBUG00000012149	rpusd2	94	33.473	ENSSSCG00000036700	RPUSD2	76	35.000	Sus_scrofa
ENSEBUG00000012149	rpusd2	68	55.319	ENSTRUG00000025880	rpusd2	84	33.406	Takifugu_rubripes
ENSEBUG00000012149	rpusd2	84	34.475	ENSTNIG00000017329	rpusd2	85	34.475	Tetraodon_nigroviridis
ENSEBUG00000012149	rpusd2	86	30.405	ENSTBEG00000007933	RPUSD2	77	30.405	Tupaia_belangeri
ENSEBUG00000012149	rpusd2	84	35.797	ENSTTRG00000010585	RPUSD2	77	35.797	Tursiops_truncatus
ENSEBUG00000012149	rpusd2	94	33.958	ENSUAMG00000001470	RPUSD2	82	35.253	Ursus_americanus
ENSEBUG00000012149	rpusd2	94	33.750	ENSUMAG00000012487	RPUSD2	68	35.253	Ursus_maritimus
ENSEBUG00000012149	rpusd2	84	34.660	ENSVPAG00000003844	RPUSD2	77	34.660	Vicugna_pacos
ENSEBUG00000012149	rpusd2	90	34.483	ENSVVUG00000026590	RPUSD2	76	35.566	Vulpes_vulpes
ENSEBUG00000012149	rpusd2	84	35.349	ENSXETG00000015973	rpusd2	91	35.349	Xenopus_tropicalis
ENSEBUG00000012149	rpusd2	83	35.545	ENSXMAG00000021821	rpusd2	84	35.545	Xiphophorus_maculatus