EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012179 (Gene tree)
Gene ID: -
Gene Symbol: rasef (1 of many)
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 107469 bases
Position: chrFYBX02010783.1:2081752-2189220
Accession: ZDB-GENE-081105-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000019611	MMR_HSR1	PF01926.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020187	-	3216	-	ENSEBUP00000019611	599 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012179	rasef	63	64.943	ENSEBUG00000012629	rasef	63	53.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012179	rasef	99	38.088	ENSG00000165105	RASEF	78	38.088	Homo_sapiens
ENSEBUG00000012179	rasef	71	59.223	ENSAPOG00000024369	rasef	94	35.614	Acanthochromis_polyacanthus
ENSEBUG00000012179	rasef	99	39.677	ENSAMEG00000009467	RASEF	79	39.677	Ailuropoda_melanoleuca
ENSEBUG00000012179	rasef	67	57.277	ENSACIG00000005549	rasef	80	35.570	Amphilophus_citrinellus
ENSEBUG00000012179	rasef	94	36.548	ENSAOCG00000011464	rasef	77	36.548	Amphiprion_ocellaris
ENSEBUG00000012179	rasef	94	35.702	ENSATEG00000015032	rasef	82	35.702	Anabas_testudineus
ENSEBUG00000012179	rasef	96	39.829	ENSAPLG00000013969	RASEF	92	38.980	Anas_platyrhynchos
ENSEBUG00000012179	rasef	95	40.169	ENSACAG00000002155	RASEF	78	40.169	Anolis_carolinensis
ENSEBUG00000012179	rasef	99	38.599	ENSANAG00000035226	RASEF	78	38.599	Aotus_nancymaae
ENSEBUG00000012179	rasef	99	36.407	ENSACLG00000017818	rasef	84	36.407	Astatotilapia_calliptera
ENSEBUG00000012179	rasef	96	38.514	ENSAMXG00000011411	rasef	77	38.514	Astyanax_mexicanus
ENSEBUG00000012179	rasef	99	38.699	ENSBTAG00000021751	RASEF	78	38.699	Bos_taurus
ENSEBUG00000012179	rasef	99	38.250	ENSCJAG00000003547	RASEF	78	38.250	Callithrix_jacchus
ENSEBUG00000012179	rasef	99	39.355	ENSCAFG00000001453	RASEF	71	39.251	Canis_familiaris
ENSEBUG00000012179	rasef	99	39.355	ENSCAFG00020023859	RASEF	78	39.355	Canis_lupus_dingo
ENSEBUG00000012179	rasef	99	38.211	ENSCHIG00000020336	RASEF	93	38.211	Capra_hircus
ENSEBUG00000012179	rasef	89	40.536	ENSTSYG00000006987	RASEF	99	40.536	Carlito_syrichta
ENSEBUG00000012179	rasef	59	54.857	ENSCAPG00000010585	-	77	54.857	Cavia_aperea
ENSEBUG00000012179	rasef	99	39.280	ENSCPOG00000005004	RASEF	97	39.280	Cavia_porcellus
ENSEBUG00000012179	rasef	99	38.274	ENSCCAG00000031624	RASEF	78	38.274	Cebus_capucinus
ENSEBUG00000012179	rasef	62	49.084	ENSCLAG00000004622	-	77	49.084	Chinchilla_lanigera
ENSEBUG00000012179	rasef	99	37.925	ENSCSAG00000007663	RASEF	79	37.925	Chlorocebus_sabaeus
ENSEBUG00000012179	rasef	93	40.728	ENSCHOG00000001831	RASEF	91	40.728	Choloepus_hoffmanni
ENSEBUG00000012179	rasef	94	40.035	ENSCPBG00000019037	RASEF	88	40.035	Chrysemys_picta_bellii
ENSEBUG00000012179	rasef	99	37.763	ENSCANG00000034081	RASEF	78	37.763	Colobus_angolensis_palliatus
ENSEBUG00000012179	rasef	99	38.989	ENSCGRG00001001324	Rasef	98	38.989	Cricetulus_griseus_chok1gshd
ENSEBUG00000012179	rasef	94	39.897	ENSCGRG00000006455	Rasef	99	39.897	Cricetulus_griseus_crigri
ENSEBUG00000012179	rasef	68	59.333	ENSCSEG00000017898	rasef	74	31.076	Cynoglossus_semilaevis
ENSEBUG00000012179	rasef	99	37.002	ENSCVAG00000006168	rasef	72	37.002	Cyprinodon_variegatus
ENSEBUG00000012179	rasef	99	36.971	ENSDARG00000076250	rasef	83	36.971	Danio_rerio
ENSEBUG00000012179	rasef	99	39.512	ENSDNOG00000006002	RASEF	71	39.512	Dasypus_novemcinctus
ENSEBUG00000012179	rasef	94	39.519	ENSDORG00000015570	Rasef	100	39.587	Dipodomys_ordii
ENSEBUG00000012179	rasef	99	38.088	ENSEASG00005015967	RASEF	94	40.000	Equus_asinus_asinus
ENSEBUG00000012179	rasef	99	37.925	ENSECAG00000000324	RASEF	94	39.817	Equus_caballus
ENSEBUG00000012179	rasef	61	59.716	ENSEEUG00000008455	RASEF	66	59.716	Erinaceus_europaeus
ENSEBUG00000012179	rasef	99	39.024	ENSFCAG00000002416	RASEF	79	39.024	Felis_catus
ENSEBUG00000012179	rasef	95	40.171	ENSFALG00000003611	RASEF	92	40.171	Ficedula_albicollis
ENSEBUG00000012179	rasef	99	38.925	ENSFDAG00000013428	RASEF	97	38.925	Fukomys_damarensis
ENSEBUG00000012179	rasef	95	36.672	ENSFHEG00000022470	rasef	75	36.672	Fundulus_heteroclitus
ENSEBUG00000012179	rasef	65	64.368	ENSGMOG00000010090	rasef	67	64.368	Gadus_morhua
ENSEBUG00000012179	rasef	94	39.896	ENSGALG00000012576	RASEF	78	39.896	Gallus_gallus
ENSEBUG00000012179	rasef	99	36.276	ENSGAFG00000013735	rasef	82	36.276	Gambusia_affinis
ENSEBUG00000012179	rasef	99	36.143	ENSGACG00000007528	rasef	83	36.143	Gasterosteus_aculeatus
ENSEBUG00000012179	rasef	99	39.669	ENSGAGG00000007338	RASEF	99	40.323	Gopherus_agassizii
ENSEBUG00000012179	rasef	99	37.931	ENSGGOG00000006651	RASEF	78	37.891	Gorilla_gorilla
ENSEBUG00000012179	rasef	99	37.202	ENSHBUG00000010345	rasef	72	37.202	Haplochromis_burtoni
ENSEBUG00000012179	rasef	99	39.187	ENSHGLG00000000399	RASEF	79	39.187	Heterocephalus_glaber_female
ENSEBUG00000012179	rasef	99	39.187	ENSHGLG00100008043	RASEF	97	39.187	Heterocephalus_glaber_male
ENSEBUG00000012179	rasef	69	56.744	ENSHCOG00000010976	rasef	79	35.225	Hippocampus_comes
ENSEBUG00000012179	rasef	71	61.905	ENSIPUG00000008768	rasef	58	61.905	Ictalurus_punctatus
ENSEBUG00000012179	rasef	99	38.989	ENSSTOG00000004311	RASEF	78	38.989	Ictidomys_tridecemlineatus
ENSEBUG00000012179	rasef	99	39.274	ENSJJAG00000023215	Rasef	97	39.274	Jaculus_jaculus
ENSEBUG00000012179	rasef	71	56.522	ENSKMAG00000021106	rasef	51	56.796	Kryptolebias_marmoratus
ENSEBUG00000012179	rasef	65	65.517	ENSLBEG00000021098	-	68	34.309	Labrus_bergylta
ENSEBUG00000012179	rasef	66	67.416	ENSLACG00000010849	RASEF	64	55.466	Latimeria_chalumnae
ENSEBUG00000012179	rasef	99	38.339	ENSLOCG00000002094	rasef	82	38.339	Lepisosteus_oculatus
ENSEBUG00000012179	rasef	99	39.052	ENSLAFG00000010552	RASEF	97	39.052	Loxodonta_africana
ENSEBUG00000012179	rasef	99	37.763	ENSMFAG00000046414	RASEF	78	37.763	Macaca_fascicularis
ENSEBUG00000012179	rasef	99	37.763	ENSMNEG00000044341	RASEF	78	37.763	Macaca_nemestrina
ENSEBUG00000012179	rasef	99	38.065	ENSMLEG00000034579	RASEF	78	38.065	Mandrillus_leucophaeus
ENSEBUG00000012179	rasef	84	35.294	ENSMAMG00000001536	rasef	80	34.457	Mastacembelus_armatus
ENSEBUG00000012179	rasef	70	56.132	ENSMZEG00005004819	rasef	62	56.132	Maylandia_zebra
ENSEBUG00000012179	rasef	99	38.336	ENSMAUG00000010820	Rasef	97	38.336	Mesocricetus_auratus
ENSEBUG00000012179	rasef	99	38.537	ENSMICG00000011836	RASEF	78	38.537	Microcebus_murinus
ENSEBUG00000012179	rasef	99	38.499	ENSMOCG00000000943	Rasef	100	39.086	Microtus_ochrogaster
ENSEBUG00000012179	rasef	95	35.915	ENSMMOG00000000102	rasef	79	35.924	Mola_mola
ENSEBUG00000012179	rasef	99	38.889	ENSMODG00000009037	RASEF	79	38.889	Monodelphis_domestica
ENSEBUG00000012179	rasef	99	37.763	ENSMALG00000009830	rasef	83	37.763	Monopterus_albus
ENSEBUG00000012179	rasef	99	38.889	MGP_CAROLIEiJ_G0026109	Rasef	99	39.794	Mus_caroli
ENSEBUG00000012179	rasef	99	39.052	ENSMUSG00000043003	Rasef	99	39.966	Mus_musculus
ENSEBUG00000012179	rasef	99	38.462	MGP_PahariEiJ_G0028447	Rasef	99	38.660	Mus_pahari
ENSEBUG00000012179	rasef	99	39.152	MGP_SPRETEiJ_G0027075	Rasef	99	40.068	Mus_spretus
ENSEBUG00000012179	rasef	94	40.238	ENSMPUG00000013070	RASEF	99	40.238	Mustela_putorius_furo
ENSEBUG00000012179	rasef	94	39.587	ENSMLUG00000013108	RASEF	78	38.134	Myotis_lucifugus
ENSEBUG00000012179	rasef	95	38.540	ENSNGAG00000014878	Rasef	100	38.540	Nannospalax_galili
ENSEBUG00000012179	rasef	62	56.667	ENSNBRG00000012335	rasef	59	56.667	Neolamprologus_brichardi
ENSEBUG00000012179	rasef	99	37.763	ENSNLEG00000003245	RASEF	78	37.763	Nomascus_leucogenys
ENSEBUG00000012179	rasef	99	38.088	ENSMEUG00000016412	RASEF	78	38.088	Notamacropus_eugenii
ENSEBUG00000012179	rasef	79	35.976	ENSOPRG00000002742	-	62	35.976	Ochotona_princeps
ENSEBUG00000012179	rasef	99	37.102	ENSONIG00000015021	rasef	79	37.436	Oreochromis_niloticus
ENSEBUG00000012179	rasef	94	40.100	ENSOANG00000010379	RASEF	79	38.986	Ornithorhynchus_anatinus
ENSEBUG00000012179	rasef	99	37.803	ENSOCUG00000001548	RASEF	78	37.641	Oryctolagus_cuniculus
ENSEBUG00000012179	rasef	73	58.454	ENSORLG00000005076	rasef	72	35.304	Oryzias_latipes
ENSEBUG00000012179	rasef	73	58.654	ENSORLG00015008479	rasef	72	35.783	Oryzias_latipes_hsok
ENSEBUG00000012179	rasef	99	38.835	ENSOGAG00000012724	RASEF	97	38.835	Otolemur_garnettii
ENSEBUG00000012179	rasef	99	38.173	ENSOARG00000009073	RASEF	74	38.336	Ovis_aries
ENSEBUG00000012179	rasef	99	38.374	ENSPPAG00000042152	RASEF	81	38.374	Pan_paniscus
ENSEBUG00000012179	rasef	99	39.187	ENSPPRG00000008487	RASEF	78	39.187	Panthera_pardus
ENSEBUG00000012179	rasef	99	39.222	ENSPTIG00000006676	RASEF	96	40.835	Panthera_tigris_altaica
ENSEBUG00000012179	rasef	99	38.374	ENSPTRG00000021052	RASEF	81	38.374	Pan_troglodytes
ENSEBUG00000012179	rasef	99	37.925	ENSPANG00000024899	RASEF	78	37.925	Papio_anubis
ENSEBUG00000012179	rasef	99	38.925	ENSPSIG00000017699	RASEF	92	38.835	Pelodiscus_sinensis
ENSEBUG00000012179	rasef	62	59.135	ENSPMGG00000015499	rasef	89	70.476	Periophthalmus_magnuspinnatus
ENSEBUG00000012179	rasef	99	38.862	ENSPEMG00000002797	Rasef	100	39.460	Peromyscus_maniculatus_bairdii
ENSEBUG00000012179	rasef	73	58.525	ENSPMAG00000001634	rasef	78	39.322	Petromyzon_marinus
ENSEBUG00000012179	rasef	99	38.799	ENSPCIG00000027655	RASEF	78	38.799	Phascolarctos_cinereus
ENSEBUG00000012179	rasef	99	36.000	ENSPFOG00000018924	rasef	80	36.000	Poecilia_formosa
ENSEBUG00000012179	rasef	99	35.784	ENSPLAG00000022907	RASEF	95	35.784	Poecilia_latipinna
ENSEBUG00000012179	rasef	99	36.187	ENSPMEG00000006546	rasef	84	36.187	Poecilia_mexicana
ENSEBUG00000012179	rasef	99	36.656	ENSPREG00000018728	rasef	71	36.656	Poecilia_reticulata
ENSEBUG00000012179	rasef	99	37.925	ENSPPYG00000019320	RASEF	78	37.925	Pongo_abelii
ENSEBUG00000012179	rasef	99	38.989	ENSPCOG00000022979	RASEF	78	38.989	Propithecus_coquereli
ENSEBUG00000012179	rasef	99	37.582	ENSPVAG00000003682	RASEF	78	37.582	Pteropus_vampyrus
ENSEBUG00000012179	rasef	66	57.143	ENSPNYG00000010579	rasef	54	57.143	Pundamilia_nyererei
ENSEBUG00000012179	rasef	96	37.209	ENSPNAG00000016447	rasef	79	37.209	Pygocentrus_nattereri
ENSEBUG00000012179	rasef	99	38.042	ENSRNOG00000024190	Rasef	82	38.042	Rattus_norvegicus
ENSEBUG00000012179	rasef	99	37.662	ENSRBIG00000039516	RASEF	78	37.662	Rhinopithecus_bieti
ENSEBUG00000012179	rasef	94	38.488	ENSRROG00000044397	RASEF	77	38.488	Rhinopithecus_roxellana
ENSEBUG00000012179	rasef	99	38.312	ENSSBOG00000029298	RASEF	78	38.312	Saimiri_boliviensis_boliviensis
ENSEBUG00000012179	rasef	99	38.980	ENSSFOG00015009014	rasef	81	38.980	Scleropages_formosus
ENSEBUG00000012179	rasef	99	34.796	ENSSMAG00000000942	rasef	84	34.219	Scophthalmus_maximus
ENSEBUG00000012179	rasef	55	62.353	ENSSDUG00000022228	rasef	50	62.644	Seriola_dumerili
ENSEBUG00000012179	rasef	99	35.135	ENSSLDG00000001784	rasef	65	35.266	Seriola_lalandi_dorsalis
ENSEBUG00000012179	rasef	94	39.966	ENSSPUG00000002899	RASEF	77	39.966	Sphenodon_punctatus
ENSEBUG00000012179	rasef	70	59.420	ENSSPAG00000002442	rasef	50	59.135	Stegastes_partitus
ENSEBUG00000012179	rasef	99	38.673	ENSSSCG00000040707	-	87	38.673	Sus_scrofa
ENSEBUG00000012179	rasef	94	40.493	ENSTGUG00000003216	RASEF	76	40.493	Taeniopygia_guttata
ENSEBUG00000012179	rasef	99	35.247	ENSTRUG00000011541	rasef	84	35.247	Takifugu_rubripes
ENSEBUG00000012179	rasef	99	34.658	ENSTNIG00000006010	rasef	79	34.658	Tetraodon_nigroviridis
ENSEBUG00000012179	rasef	99	34.032	ENSTTRG00000002061	RASEF	78	34.032	Tursiops_truncatus
ENSEBUG00000012179	rasef	99	40.000	ENSUAMG00000021591	RASEF	94	39.677	Ursus_americanus
ENSEBUG00000012179	rasef	99	39.677	ENSUMAG00000004670	RASEF	91	39.677	Ursus_maritimus
ENSEBUG00000012179	rasef	99	39.088	ENSVVUG00000029736	RASEF	99	40.426	Vulpes_vulpes
ENSEBUG00000012179	rasef	94	39.123	ENSXETG00000016758	mgc147600	76	39.831	Xenopus_tropicalis
ENSEBUG00000012179	rasef	64	65.143	ENSXCOG00000005178	rasef	59	65.143	Xiphophorus_couchianus
ENSEBUG00000012179	rasef	99	36.218	ENSXMAG00000015129	rasef	84	36.218	Xiphophorus_maculatus