EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012363 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpc
Alias: fb57h12|fi16b11|wu:fb57h12|wu:fi16b11|zgc:55701
Full Name: heterogeneous nuclear ribonucleoprotein C
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 120615 bases
Position: chrFYBX02009973.1:5934636-6055250
Accession: ZDB-GENE-040426-2043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000019907	RRM_1	PF00076.22	2.4e-10	1	1
ENSEBUP00000019916	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020492	-	2684	-	ENSEBUP00000019916	330 (aa)	-	-
ENSEBUT00000020484	-	2675	-	ENSEBUP00000019907	329 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012363	hnrnpc	64	47.442	ENSEBUG00000006049	RALYL	74	47.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012363	hnrnpc	69	47.755	ENSG00000184672	RALYL	92	73.077	Homo_sapiens
ENSEBUG00000012363	hnrnpc	70	45.339	ENSAPOG00000006963	hnrnpc	71	46.414	Acanthochromis_polyacanthus
ENSEBUG00000012363	hnrnpc	79	37.993	ENSACIG00000016568	-	92	45.420	Amphilophus_citrinellus
ENSEBUG00000012363	hnrnpc	66	46.083	ENSACIG00000000270	-	82	46.460	Amphilophus_citrinellus
ENSEBUG00000012363	hnrnpc	67	46.491	ENSAOCG00000021616	-	95	39.752	Amphiprion_ocellaris
ENSEBUG00000012363	hnrnpc	70	45.339	ENSAOCG00000003896	-	71	46.414	Amphiprion_ocellaris
ENSEBUG00000012363	hnrnpc	70	45.339	ENSAPEG00000001489	-	71	46.414	Amphiprion_percula
ENSEBUG00000012363	hnrnpc	67	45.614	ENSAPEG00000019962	-	73	46.667	Amphiprion_percula
ENSEBUG00000012363	hnrnpc	67	47.137	ENSATEG00000011734	-	72	48.018	Anabas_testudineus
ENSEBUG00000012363	hnrnpc	69	44.726	ENSATEG00000018006	-	93	43.396	Anabas_testudineus
ENSEBUG00000012363	hnrnpc	72	44.697	ENSAPLG00000015574	RALYL	82	44.800	Anas_platyrhynchos
ENSEBUG00000012363	hnrnpc	72	44.275	ENSACAG00000028464	RALYL	81	44.980	Anolis_carolinensis
ENSEBUG00000012363	hnrnpc	69	47.791	ENSANAG00000023383	RALYL	79	48.511	Aotus_nancymaae
ENSEBUG00000012363	hnrnpc	66	45.536	ENSACLG00000000995	-	80	47.297	Astatotilapia_calliptera
ENSEBUG00000012363	hnrnpc	64	45.662	ENSACLG00000013636	-	72	45.815	Astatotilapia_calliptera
ENSEBUG00000012363	hnrnpc	67	46.053	ENSACLG00000005707	-	73	47.111	Astatotilapia_calliptera
ENSEBUG00000012363	hnrnpc	67	48.899	ENSAMXG00000034915	zgc:55733	89	44.231	Astyanax_mexicanus
ENSEBUG00000012363	hnrnpc	57	41.451	ENSAMXG00000042946	hnrnpc	97	38.835	Astyanax_mexicanus
ENSEBUG00000012363	hnrnpc	69	47.755	ENSCJAG00000000402	RALYL	79	48.485	Callithrix_jacchus
ENSEBUG00000012363	hnrnpc	84	41.801	ENSCPOG00000012314	RALYL	96	42.761	Cavia_porcellus
ENSEBUG00000012363	hnrnpc	69	47.755	ENSCCAG00000025003	RALYL	91	59.223	Cebus_capucinus
ENSEBUG00000012363	hnrnpc	69	47.755	ENSCATG00000042145	RALYL	79	48.485	Cercocebus_atys
ENSEBUG00000012363	hnrnpc	72	44.318	ENSCLAG00000005228	RALYL	81	45.783	Chinchilla_lanigera
ENSEBUG00000012363	hnrnpc	66	46.341	ENSCHOG00000013228	RALYL	76	44.534	Choloepus_hoffmanni
ENSEBUG00000012363	hnrnpc	69	47.755	ENSCANG00000039144	RALYL	79	48.485	Colobus_angolensis_palliatus
ENSEBUG00000012363	hnrnpc	72	45.076	ENSCGRG00001009241	Ralyl	81	44.358	Cricetulus_griseus_chok1gshd
ENSEBUG00000012363	hnrnpc	67	46.888	ENSCSEG00000019769	-	76	46.444	Cynoglossus_semilaevis
ENSEBUG00000012363	hnrnpc	67	45.868	ENSCSEG00000021349	-	90	41.472	Cynoglossus_semilaevis
ENSEBUG00000012363	hnrnpc	76	43.273	ENSCVAG00000002797	-	71	47.556	Cyprinodon_variegatus
ENSEBUG00000012363	hnrnpc	69	43.548	ENSCVAG00000016981	-	93	39.748	Cyprinodon_variegatus
ENSEBUG00000012363	hnrnpc	67	48.018	ENSDARG00000103845	zgc:55733	95	43.893	Danio_rerio
ENSEBUG00000012363	hnrnpc	67	45.833	ENSDARG00000053810	hnrnpc	69	44.737	Danio_rerio
ENSEBUG00000012363	hnrnpc	72	43.939	ENSDORG00000003721	Ralyl	81	44.980	Dipodomys_ordii
ENSEBUG00000012363	hnrnpc	72	43.939	ENSEEUG00000007202	RALYL	83	45.783	Erinaceus_europaeus
ENSEBUG00000012363	hnrnpc	69	44.635	ENSELUG00000007714	-	92	43.116	Esox_lucius
ENSEBUG00000012363	hnrnpc	67	48.035	ENSELUG00000004132	-	73	47.368	Esox_lucius
ENSEBUG00000012363	hnrnpc	71	44.106	ENSFALG00000008647	RALYL	96	49.776	Ficedula_albicollis
ENSEBUG00000012363	hnrnpc	65	49.099	ENSFHEG00000003605	-	70	48.444	Fundulus_heteroclitus
ENSEBUG00000012363	hnrnpc	67	43.478	ENSFHEG00000007278	-	87	40.000	Fundulus_heteroclitus
ENSEBUG00000012363	hnrnpc	72	46.640	ENSGALG00000036938	RALYL	86	40.938	Gallus_gallus
ENSEBUG00000012363	hnrnpc	65	47.788	ENSGAFG00000020486	-	80	46.930	Gambusia_affinis
ENSEBUG00000012363	hnrnpc	69	45.306	ENSGAFG00000020992	-	99	41.696	Gambusia_affinis
ENSEBUG00000012363	hnrnpc	67	49.130	ENSGACG00000017772	-	88	47.521	Gasterosteus_aculeatus
ENSEBUG00000012363	hnrnpc	66	50.000	ENSGACG00000018932	-	85	49.302	Gasterosteus_aculeatus
ENSEBUG00000012363	hnrnpc	69	47.755	ENSGGOG00000000841	RALYL	79	48.485	Gorilla_gorilla
ENSEBUG00000012363	hnrnpc	64	45.662	ENSHBUG00000018342	-	74	45.643	Haplochromis_burtoni
ENSEBUG00000012363	hnrnpc	67	46.087	ENSHBUG00000010527	-	69	46.957	Haplochromis_burtoni
ENSEBUG00000012363	hnrnpc	72	43.939	ENSHGLG00000004866	RALYL	81	44.980	Heterocephalus_glaber_female
ENSEBUG00000012363	hnrnpc	72	43.939	ENSHGLG00100017480	RALYL	81	44.980	Heterocephalus_glaber_male
ENSEBUG00000012363	hnrnpc	78	42.164	ENSHCOG00000012333	hnrnpc	93	40.909	Hippocampus_comes
ENSEBUG00000012363	hnrnpc	67	47.162	ENSIPUG00000011271	hnrnpc	97	42.060	Ictalurus_punctatus
ENSEBUG00000012363	hnrnpc	67	50.000	ENSIPUG00000008666	zgc:55733	93	46.835	Ictalurus_punctatus
ENSEBUG00000012363	hnrnpc	72	44.318	ENSSTOG00000012583	RALYL	83	45.382	Ictidomys_tridecemlineatus
ENSEBUG00000012363	hnrnpc	75	44.094	ENSKMAG00000011170	-	96	44.565	Kryptolebias_marmoratus
ENSEBUG00000012363	hnrnpc	69	43.644	ENSKMAG00000018265	-	71	45.148	Kryptolebias_marmoratus
ENSEBUG00000012363	hnrnpc	69	43.265	ENSLBEG00000024418	-	96	39.423	Labrus_bergylta
ENSEBUG00000012363	hnrnpc	68	45.923	ENSLBEG00000006979	-	97	40.333	Labrus_bergylta
ENSEBUG00000012363	hnrnpc	69	44.304	ENSLBEG00000006193	-	83	41.241	Labrus_bergylta
ENSEBUG00000012363	hnrnpc	64	43.304	ENSLOCG00000002560	hnrnpc	79	40.496	Lepisosteus_oculatus
ENSEBUG00000012363	hnrnpc	69	47.755	ENSMNEG00000033288	RALYL	79	48.485	Macaca_nemestrina
ENSEBUG00000012363	hnrnpc	69	47.755	ENSMLEG00000038284	RALYL	79	48.485	Mandrillus_leucophaeus
ENSEBUG00000012363	hnrnpc	76	42.308	ENSMAMG00000008033	-	93	42.446	Mastacembelus_armatus
ENSEBUG00000012363	hnrnpc	68	48.246	ENSMAMG00000012236	-	74	46.903	Mastacembelus_armatus
ENSEBUG00000012363	hnrnpc	67	45.815	ENSMZEG00005020460	-	93	42.701	Maylandia_zebra
ENSEBUG00000012363	hnrnpc	67	46.053	ENSMZEG00005024249	-	68	47.982	Maylandia_zebra
ENSEBUG00000012363	hnrnpc	72	45.076	ENSMAUG00000015149	Ralyl	81	44.358	Mesocricetus_auratus
ENSEBUG00000012363	hnrnpc	72	45.850	ENSMICG00000005558	RALYL	79	71.795	Microcebus_murinus
ENSEBUG00000012363	hnrnpc	71	45.594	ENSMOCG00000017371	Ralyl	80	44.706	Microtus_ochrogaster
ENSEBUG00000012363	hnrnpc	66	46.429	ENSMMOG00000019520	-	91	45.560	Mola_mola
ENSEBUG00000012363	hnrnpc	67	47.137	ENSMMOG00000021465	-	74	47.297	Mola_mola
ENSEBUG00000012363	hnrnpc	64	52.607	ENSMALG00000007520	-	88	44.882	Monopterus_albus
ENSEBUG00000012363	hnrnpc	67	47.368	ENSMALG00000014623	-	83	42.909	Monopterus_albus
ENSEBUG00000012363	hnrnpc	72	45.076	ENSMUSG00000039717	Ralyl	92	74.359	Mus_musculus
ENSEBUG00000012363	hnrnpc	72	44.318	ENSMPUG00000010724	RALYL	81	44.664	Mustela_putorius_furo
ENSEBUG00000012363	hnrnpc	72	44.697	ENSNGAG00000013375	Ralyl	81	45.783	Nannospalax_galili
ENSEBUG00000012363	hnrnpc	67	46.696	ENSNBRG00000015676	-	75	48.430	Neolamprologus_brichardi
ENSEBUG00000012363	hnrnpc	65	46.154	ENSNBRG00000004912	-	92	42.979	Neolamprologus_brichardi
ENSEBUG00000012363	hnrnpc	69	47.755	ENSNLEG00000002702	RALYL	75	48.485	Nomascus_leucogenys
ENSEBUG00000012363	hnrnpc	56	41.589	ENSOPRG00000013650	-	100	39.815	Ochotona_princeps
ENSEBUG00000012363	hnrnpc	72	45.076	ENSODEG00000001012	RALYL	81	46.185	Octodon_degus
ENSEBUG00000012363	hnrnpc	67	46.087	ENSONIG00000018350	-	69	46.957	Oreochromis_niloticus
ENSEBUG00000012363	hnrnpc	67	44.681	ENSONIG00000007859	-	79	44.583	Oreochromis_niloticus
ENSEBUG00000012363	hnrnpc	80	40.357	ENSORLG00000003144	-	82	41.135	Oryzias_latipes
ENSEBUG00000012363	hnrnpc	65	46.753	ENSORLG00000009999	-	69	46.903	Oryzias_latipes
ENSEBUG00000012363	hnrnpc	65	46.875	ENSORLG00020018228	hnrnpc	69	46.903	Oryzias_latipes_hni
ENSEBUG00000012363	hnrnpc	80	40.357	ENSORLG00015009460	-	82	41.135	Oryzias_latipes_hsok
ENSEBUG00000012363	hnrnpc	65	46.753	ENSORLG00015019755	-	69	46.903	Oryzias_latipes_hsok
ENSEBUG00000012363	hnrnpc	69	44.304	ENSOMEG00000022665	-	84	42.652	Oryzias_melastigma
ENSEBUG00000012363	hnrnpc	65	47.619	ENSOMEG00000020488	-	69	45.575	Oryzias_melastigma
ENSEBUG00000012363	hnrnpc	69	47.755	ENSPPAG00000038705	RALYL	79	48.485	Pan_paniscus
ENSEBUG00000012363	hnrnpc	72	46.640	ENSPPRG00000018612	RALYL	80	46.694	Panthera_pardus
ENSEBUG00000012363	hnrnpc	72	46.640	ENSPTIG00000020331	RALYL	80	46.694	Panthera_tigris_altaica
ENSEBUG00000012363	hnrnpc	69	47.755	ENSPTRG00000020381	RALYL	79	48.485	Pan_troglodytes
ENSEBUG00000012363	hnrnpc	69	47.755	ENSPANG00000029305	RALYL	79	48.485	Papio_anubis
ENSEBUG00000012363	hnrnpc	67	47.137	ENSPKIG00000022837	-	93	41.776	Paramormyrops_kingsleyae
ENSEBUG00000012363	hnrnpc	75	44.314	ENSPKIG00000008592	-	69	48.261	Paramormyrops_kingsleyae
ENSEBUG00000012363	hnrnpc	84	41.558	ENSPSIG00000011135	RALYL	96	41.946	Pelodiscus_sinensis
ENSEBUG00000012363	hnrnpc	68	46.781	ENSPMGG00000013144	-	94	44.275	Periophthalmus_magnuspinnatus
ENSEBUG00000012363	hnrnpc	64	47.368	ENSPMGG00000017774	-	93	39.224	Periophthalmus_magnuspinnatus
ENSEBUG00000012363	hnrnpc	72	44.697	ENSPEMG00000016447	Ralyl	81	43.969	Peromyscus_maniculatus_bairdii
ENSEBUG00000012363	hnrnpc	65	46.414	ENSPMAG00000002407	RALYL	97	46.383	Petromyzon_marinus
ENSEBUG00000012363	hnrnpc	69	44.130	ENSPFOG00000002643	-	93	39.617	Poecilia_formosa
ENSEBUG00000012363	hnrnpc	64	47.059	ENSPFOG00000001583	-	71	47.639	Poecilia_formosa
ENSEBUG00000012363	hnrnpc	69	44.130	ENSPLAG00000000061	-	83	41.844	Poecilia_latipinna
ENSEBUG00000012363	hnrnpc	64	46.818	ENSPLAG00000015305	-	70	47.162	Poecilia_latipinna
ENSEBUG00000012363	hnrnpc	64	48.869	ENSPMEG00000004802	-	70	49.130	Poecilia_mexicana
ENSEBUG00000012363	hnrnpc	69	44.130	ENSPMEG00000016524	-	93	39.617	Poecilia_mexicana
ENSEBUG00000012363	hnrnpc	64	48.624	ENSPREG00000007928	-	78	41.254	Poecilia_reticulata
ENSEBUG00000012363	hnrnpc	69	44.130	ENSPREG00000001852	-	90	41.844	Poecilia_reticulata
ENSEBUG00000012363	hnrnpc	73	45.318	ENSPVAG00000010821	RALYL	83	47.843	Pteropus_vampyrus
ENSEBUG00000012363	hnrnpc	67	46.696	ENSPNYG00000003747	-	74	48.430	Pundamilia_nyererei
ENSEBUG00000012363	hnrnpc	66	47.639	ENSPNYG00000020293	-	85	43.162	Pundamilia_nyererei
ENSEBUG00000012363	hnrnpc	67	48.458	ENSPNAG00000019200	zgc:55733	93	42.414	Pygocentrus_nattereri
ENSEBUG00000012363	hnrnpc	67	45.415	ENSPNAG00000015686	hnrnpc	92	39.209	Pygocentrus_nattereri
ENSEBUG00000012363	hnrnpc	69	47.755	ENSRROG00000023925	RALYL	81	71.250	Rhinopithecus_roxellana
ENSEBUG00000012363	hnrnpc	67	46.288	ENSSFOG00015012015	-	95	44.788	Scleropages_formosus
ENSEBUG00000012363	hnrnpc	69	45.570	ENSSFOG00015012924	-	79	74.359	Scleropages_formosus
ENSEBUG00000012363	hnrnpc	66	43.805	ENSSMAG00000013592	-	68	46.847	Scophthalmus_maximus
ENSEBUG00000012363	hnrnpc	69	44.770	ENSSMAG00000011147	-	94	43.284	Scophthalmus_maximus
ENSEBUG00000012363	hnrnpc	66	46.460	ENSSDUG00000001723	-	70	47.345	Seriola_dumerili
ENSEBUG00000012363	hnrnpc	67	46.930	ENSSDUG00000006730	-	69	47.807	Seriola_dumerili
ENSEBUG00000012363	hnrnpc	65	47.059	ENSSLDG00000007454	-	69	47.748	Seriola_lalandi_dorsalis
ENSEBUG00000012363	hnrnpc	67	48.246	ENSSLDG00000007474	-	91	42.909	Seriola_lalandi_dorsalis
ENSEBUG00000012363	hnrnpc	65	45.701	ENSSPAG00000023204	-	70	46.256	Stegastes_partitus
ENSEBUG00000012363	hnrnpc	69	44.726	ENSSPAG00000013996	-	84	41.304	Stegastes_partitus
ENSEBUG00000012363	hnrnpc	69	44.531	ENSTGUG00000011689	RALYL	81	45.868	Taeniopygia_guttata
ENSEBUG00000012363	hnrnpc	66	46.753	ENSTRUG00000020158	-	71	46.018	Takifugu_rubripes
ENSEBUG00000012363	hnrnpc	64	45.291	ENSTNIG00000007427	-	85	41.328	Tetraodon_nigroviridis
ENSEBUG00000012363	hnrnpc	67	43.882	ENSTNIG00000000334	-	78	46.847	Tetraodon_nigroviridis
ENSEBUG00000012363	hnrnpc	72	41.699	ENSTTRG00000015762	RALYL	81	40.816	Tursiops_truncatus
ENSEBUG00000012363	hnrnpc	72	39.773	ENSVPAG00000008501	RALYL	81	41.350	Vicugna_pacos
ENSEBUG00000012363	hnrnpc	64	48.848	ENSXCOG00000006552	-	69	47.982	Xiphophorus_couchianus
ENSEBUG00000012363	hnrnpc	69	44.130	ENSXMAG00000022849	-	88	41.489	Xiphophorus_maculatus
ENSEBUG00000012363	hnrnpc	65	46.847	ENSXMAG00000009333	-	69	47.085	Xiphophorus_maculatus