EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012448 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 98681 bases
Position: chrFYBX02010504.1:2711461-2810141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020061	Upf2	PF04050.14	5.4e-20	1	1
ENSEBUP00000020061	MIF4G	PF02854.19	9.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020637	-	2772	-	ENSEBUP00000020061	923 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012448	-	87	72.483	ENSG00000151461	UPF2	69	68.507	Homo_sapiens
ENSEBUG00000012448	-	97	63.229	ENSAPOG00000015837	UPF2	65	72.185	Acanthochromis_polyacanthus
ENSEBUG00000012448	-	87	72.483	ENSAMEG00000004586	UPF2	69	68.507	Ailuropoda_melanoleuca
ENSEBUG00000012448	-	93	68.460	ENSACIG00000018078	UPF2	64	72.483	Amphilophus_citrinellus
ENSEBUG00000012448	-	97	68.460	ENSAOCG00000016766	UPF2	66	72.185	Amphiprion_ocellaris
ENSEBUG00000012448	-	97	68.460	ENSAPEG00000019084	UPF2	66	72.185	Amphiprion_percula
ENSEBUG00000012448	-	93	68.012	ENSATEG00000021677	UPF2	64	71.523	Anabas_testudineus
ENSEBUG00000012448	-	87	73.154	ENSAPLG00000010287	UPF2	65	74.497	Anas_platyrhynchos
ENSEBUG00000012448	-	87	72.483	ENSACAG00000009259	UPF2	69	68.601	Anolis_carolinensis
ENSEBUG00000012448	-	71	61.854	ENSANAG00000028451	UPF2	89	61.854	Aotus_nancymaae
ENSEBUG00000012448	-	93	68.311	ENSACLG00000012696	UPF2	64	73.826	Astatotilapia_calliptera
ENSEBUG00000012448	-	87	72.185	ENSAMXG00000013700	UPF2	64	72.185	Astyanax_mexicanus
ENSEBUG00000012448	-	81	84.270	ENSBTAG00000000288	UPF2	62	84.270	Bos_taurus
ENSEBUG00000012448	-	87	72.483	ENSCJAG00000020685	UPF2	80	63.134	Callithrix_jacchus
ENSEBUG00000012448	-	87	72.483	ENSCAFG00000004839	UPF2	69	68.657	Canis_familiaris
ENSEBUG00000012448	-	87	72.483	ENSCAFG00020005882	UPF2	72	68.657	Canis_lupus_dingo
ENSEBUG00000012448	-	87	72.483	ENSCHIG00000020359	UPF2	69	68.358	Capra_hircus
ENSEBUG00000012448	-	87	72.483	ENSTSYG00000000935	UPF2	67	72.483	Carlito_syrichta
ENSEBUG00000012448	-	80	61.957	ENSCAPG00000016658	UPF2	61	61.646	Cavia_aperea
ENSEBUG00000012448	-	87	72.483	ENSCPOG00000008809	UPF2	69	65.522	Cavia_porcellus
ENSEBUG00000012448	-	86	72.483	ENSCCAG00000035991	UPF2	65	72.483	Cebus_capucinus
ENSEBUG00000012448	-	87	72.483	ENSCATG00000032679	UPF2	65	72.483	Cercocebus_atys
ENSEBUG00000012448	-	87	72.483	ENSCLAG00000011434	UPF2	69	68.507	Chinchilla_lanigera
ENSEBUG00000012448	-	87	72.483	ENSCSAG00000013372	UPF2	69	68.358	Chlorocebus_sabaeus
ENSEBUG00000012448	-	72	85.470	ENSCHOG00000000422	UPF2	58	76.325	Choloepus_hoffmanni
ENSEBUG00000012448	-	87	73.154	ENSCPBG00000027823	UPF2	66	73.826	Chrysemys_picta_bellii
ENSEBUG00000012448	-	69	48.177	ENSCSAVG00000007772	-	65	48.654	Ciona_savignyi
ENSEBUG00000012448	-	87	68.507	ENSCANG00000040396	UPF2	64	68.507	Colobus_angolensis_palliatus
ENSEBUG00000012448	-	87	72.483	ENSCGRG00001019347	Upf2	69	68.460	Cricetulus_griseus_chok1gshd
ENSEBUG00000012448	-	87	72.483	ENSCGRG00000017993	Upf2	69	68.460	Cricetulus_griseus_crigri
ENSEBUG00000012448	-	97	67.013	ENSCSEG00000003520	UPF2	65	72.848	Cynoglossus_semilaevis
ENSEBUG00000012448	-	93	68.161	ENSCVAG00000006167	UPF2	65	70.861	Cyprinodon_variegatus
ENSEBUG00000012448	-	87	71.141	ENSDNOG00000018160	UPF2	69	68.358	Dasypus_novemcinctus
ENSEBUG00000012448	-	87	72.483	ENSDORG00000002478	Upf2	64	73.333	Dipodomys_ordii
ENSEBUG00000012448	-	78	43.878	FBgn0029992	Upf2	62	43.878	Drosophila_melanogaster
ENSEBUG00000012448	-	87	72.483	ENSEASG00005019274	UPF2	74	68.955	Equus_asinus_asinus
ENSEBUG00000012448	-	87	72.483	ENSECAG00000017022	UPF2	69	68.955	Equus_caballus
ENSEBUG00000012448	-	75	69.799	ENSEEUG00000007819	UPF2	55	69.799	Erinaceus_europaeus
ENSEBUG00000012448	-	93	68.722	ENSELUG00000012014	UPF2	64	70.861	Esox_lucius
ENSEBUG00000012448	-	87	72.483	ENSFCAG00000005785	UPF2	69	68.806	Felis_catus
ENSEBUG00000012448	-	87	73.826	ENSFALG00000001889	UPF2	67	69.940	Ficedula_albicollis
ENSEBUG00000012448	-	87	71.711	ENSFDAG00000014348	UPF2	69	68.657	Fukomys_damarensis
ENSEBUG00000012448	-	93	69.012	ENSFHEG00000009826	UPF2	65	71.523	Fundulus_heteroclitus
ENSEBUG00000012448	-	87	73.333	ENSGMOG00000005557	UPF2	64	73.333	Gadus_morhua
ENSEBUG00000012448	-	87	73.154	ENSGALG00000033772	UPF2	69	69.242	Gallus_gallus
ENSEBUG00000012448	-	93	67.814	ENSGAFG00000020867	UPF2	64	71.523	Gambusia_affinis
ENSEBUG00000012448	-	93	67.804	ENSGACG00000001080	UPF2	65	70.861	Gasterosteus_aculeatus
ENSEBUG00000012448	-	87	72.483	ENSGAGG00000002700	UPF2	69	68.750	Gopherus_agassizii
ENSEBUG00000012448	-	87	72.483	ENSGGOG00000001479	UPF2	69	68.507	Gorilla_gorilla
ENSEBUG00000012448	-	93	68.460	ENSHBUG00000004249	UPF2	64	73.826	Haplochromis_burtoni
ENSEBUG00000012448	-	83	70.748	ENSHGLG00000003822	-	62	70.748	Heterocephalus_glaber_female
ENSEBUG00000012448	-	87	72.483	ENSHGLG00000015176	-	69	68.657	Heterocephalus_glaber_female
ENSEBUG00000012448	-	83	72.483	ENSHGLG00100010036	UPF2	67	69.716	Heterocephalus_glaber_male
ENSEBUG00000012448	-	93	67.713	ENSHCOG00000004025	UPF2	64	72.848	Hippocampus_comes
ENSEBUG00000012448	-	87	73.154	ENSIPUG00000015524	UPF2	64	73.154	Ictalurus_punctatus
ENSEBUG00000012448	-	87	72.483	ENSSTOG00000013075	UPF2	69	68.358	Ictidomys_tridecemlineatus
ENSEBUG00000012448	-	87	71.141	ENSJJAG00000004913	Upf2	69	68.507	Jaculus_jaculus
ENSEBUG00000012448	-	93	69.012	ENSKMAG00000001071	UPF2	65	72.185	Kryptolebias_marmoratus
ENSEBUG00000012448	-	71	69.058	ENSLBEG00000000728	-	62	69.357	Labrus_bergylta
ENSEBUG00000012448	-	93	69.058	ENSLBEG00000016394	-	67	70.861	Labrus_bergylta
ENSEBUG00000012448	-	89	73.510	ENSLACG00000015945	UPF2	64	73.510	Latimeria_chalumnae
ENSEBUG00000012448	-	87	72.848	ENSLOCG00000015698	UPF2	65	72.848	Lepisosteus_oculatus
ENSEBUG00000012448	-	88	72.483	ENSMFAG00000043865	UPF2	66	72.483	Macaca_fascicularis
ENSEBUG00000012448	-	87	72.483	ENSMMUG00000008241	UPF2	69	68.358	Macaca_mulatta
ENSEBUG00000012448	-	71	68.060	ENSMNEG00000008062	UPF2	65	68.358	Macaca_nemestrina
ENSEBUG00000012448	-	87	72.483	ENSMLEG00000036120	UPF2	73	68.256	Mandrillus_leucophaeus
ENSEBUG00000012448	-	97	68.610	ENSMAMG00000018276	UPF2	66	71.523	Mastacembelus_armatus
ENSEBUG00000012448	-	93	68.311	ENSMZEG00005021595	UPF2	64	73.826	Maylandia_zebra
ENSEBUG00000012448	-	87	72.973	ENSMGAG00000004573	UPF2	68	69.715	Meleagris_gallopavo
ENSEBUG00000012448	-	87	72.483	ENSMAUG00000016512	Upf2	68	64.723	Mesocricetus_auratus
ENSEBUG00000012448	-	87	72.483	ENSMICG00000001716	UPF2	72	68.806	Microcebus_murinus
ENSEBUG00000012448	-	87	72.483	ENSMOCG00000008263	Upf2	69	68.460	Microtus_ochrogaster
ENSEBUG00000012448	-	96	69.637	ENSMMOG00000006528	UPF2	66	71.523	Mola_mola
ENSEBUG00000012448	-	87	72.483	ENSMODG00000016794	UPF2	69	68.657	Monodelphis_domestica
ENSEBUG00000012448	-	87	72.848	ENSMALG00000002663	UPF2	65	72.848	Monopterus_albus
ENSEBUG00000012448	-	71	68.161	MGP_CAROLIEiJ_G0023157	Upf2	93	77.273	Mus_caroli
ENSEBUG00000012448	-	87	72.483	ENSMUSG00000043241	Upf2	93	77.273	Mus_musculus
ENSEBUG00000012448	-	87	72.483	MGP_PahariEiJ_G0019217	Upf2	93	77.273	Mus_pahari
ENSEBUG00000012448	-	87	72.483	MGP_SPRETEiJ_G0024075	Upf2	93	77.273	Mus_spretus
ENSEBUG00000012448	-	87	72.483	ENSMPUG00000001064	UPF2	69	68.507	Mustela_putorius_furo
ENSEBUG00000012448	-	87	72.483	ENSMLUG00000000228	UPF2	69	68.398	Myotis_lucifugus
ENSEBUG00000012448	-	93	68.460	ENSNBRG00000013629	UPF2	64	73.826	Neolamprologus_brichardi
ENSEBUG00000012448	-	87	72.483	ENSNLEG00000012058	UPF2	66	72.483	Nomascus_leucogenys
ENSEBUG00000012448	-	70	79.365	ENSOPRG00000006801	-	57	79.365	Ochotona_princeps
ENSEBUG00000012448	-	87	73.154	ENSODEG00000001290	UPF2	69	68.358	Octodon_degus
ENSEBUG00000012448	-	93	68.460	ENSONIG00000017991	UPF2	64	73.154	Oreochromis_niloticus
ENSEBUG00000012448	-	87	73.154	ENSOCUG00000006230	UPF2	69	68.507	Oryctolagus_cuniculus
ENSEBUG00000012448	-	87	72.848	ENSORLG00000017189	UPF2	64	72.848	Oryzias_latipes
ENSEBUG00000012448	-	87	72.848	ENSORLG00020005969	UPF2	64	72.848	Oryzias_latipes_hni
ENSEBUG00000012448	-	87	72.848	ENSORLG00015005713	UPF2	64	72.848	Oryzias_latipes_hsok
ENSEBUG00000012448	-	93	68.263	ENSOMEG00000023420	UPF2	65	72.848	Oryzias_melastigma
ENSEBUG00000012448	-	87	72.483	ENSOGAG00000005796	UPF2	69	68.209	Otolemur_garnettii
ENSEBUG00000012448	-	87	72.483	ENSOARG00000014587	UPF2	68	68.358	Ovis_aries
ENSEBUG00000012448	-	87	72.483	ENSPPAG00000037953	UPF2	65	72.483	Pan_paniscus
ENSEBUG00000012448	-	87	72.483	ENSPPRG00000000690	UPF2	69	68.806	Panthera_pardus
ENSEBUG00000012448	-	87	72.483	ENSPTIG00000008867	UPF2	69	68.806	Panthera_tigris_altaica
ENSEBUG00000012448	-	87	72.483	ENSPTRG00000002291	UPF2	69	68.507	Pan_troglodytes
ENSEBUG00000012448	-	87	72.483	ENSPANG00000023399	UPF2	65	72.483	Papio_anubis
ENSEBUG00000012448	-	87	71.523	ENSPKIG00000025502	UPF2	64	71.523	Paramormyrops_kingsleyae
ENSEBUG00000012448	-	67	68.297	ENSPSIG00000015158	UPF2	80	68.504	Pelodiscus_sinensis
ENSEBUG00000012448	-	87	72.848	ENSPMGG00000005259	UPF2	68	70.106	Periophthalmus_magnuspinnatus
ENSEBUG00000012448	-	80	61.883	ENSPEMG00000015731	Upf2	68	61.883	Peromyscus_maniculatus_bairdii
ENSEBUG00000012448	-	87	74.000	ENSPCIG00000006656	UPF2	69	68.657	Phascolarctos_cinereus
ENSEBUG00000012448	-	93	69.012	ENSPFOG00000017118	UPF2	64	71.523	Poecilia_formosa
ENSEBUG00000012448	-	93	69.012	ENSPLAG00000005094	UPF2	64	71.523	Poecilia_latipinna
ENSEBUG00000012448	-	93	69.012	ENSPMEG00000017009	UPF2	64	71.523	Poecilia_mexicana
ENSEBUG00000012448	-	93	69.474	ENSPREG00000021880	UPF2	65	71.523	Poecilia_reticulata
ENSEBUG00000012448	-	52	72.483	ENSPPYG00000002089	-	66	72.159	Pongo_abelii
ENSEBUG00000012448	-	73	73.333	ENSPCAG00000000684	UPF2	59	61.835	Procavia_capensis
ENSEBUG00000012448	-	87	72.483	ENSPCOG00000021656	UPF2	66	72.483	Propithecus_coquereli
ENSEBUG00000012448	-	87	72.483	ENSPVAG00000017286	UPF2	69	56.781	Pteropus_vampyrus
ENSEBUG00000012448	-	93	64.425	ENSPNYG00000017096	UPF2	63	73.826	Pundamilia_nyererei
ENSEBUG00000012448	-	87	72.848	ENSPNAG00000009357	UPF2	65	74.000	Pygocentrus_nattereri
ENSEBUG00000012448	-	86	67.958	ENSRNOG00000023593	Upf2	98	84.091	Rattus_norvegicus
ENSEBUG00000012448	-	87	72.483	ENSRBIG00000037780	UPF2	65	72.483	Rhinopithecus_bieti
ENSEBUG00000012448	-	87	72.483	ENSRROG00000043547	UPF2	65	72.483	Rhinopithecus_roxellana
ENSEBUG00000012448	-	87	72.483	ENSSBOG00000020012	UPF2	66	72.483	Saimiri_boliviensis_boliviensis
ENSEBUG00000012448	-	87	71.523	ENSSFOG00015023788	upf2	64	71.523	Scleropages_formosus
ENSEBUG00000012448	-	92	67.319	ENSSMAG00000007637	UPF2	65	72.078	Scophthalmus_maximus
ENSEBUG00000012448	-	93	67.862	ENSSDUG00000017244	UPF2	67	71.523	Seriola_dumerili
ENSEBUG00000012448	-	97	67.862	ENSSLDG00000016866	UPF2	66	71.523	Seriola_lalandi_dorsalis
ENSEBUG00000012448	-	87	71.812	ENSSARG00000008615	UPF2	69	67.910	Sorex_araneus
ENSEBUG00000012448	-	86	76.552	ENSSPUG00000014544	UPF2	61	75.168	Sphenodon_punctatus
ENSEBUG00000012448	-	50	84.270	ENSSSCG00000011117	-	59	84.270	Sus_scrofa
ENSEBUG00000012448	-	87	72.973	ENSTGUG00000002163	-	69	69.792	Taeniopygia_guttata
ENSEBUG00000012448	-	93	69.208	ENSTRUG00000007519	UPF2	64	70.861	Takifugu_rubripes
ENSEBUG00000012448	-	86	71.429	ENSTNIG00000004453	UPF2	66	71.429	Tetraodon_nigroviridis
ENSEBUG00000012448	-	77	68.161	ENSTBEG00000012679	UPF2	57	68.161	Tupaia_belangeri
ENSEBUG00000012448	-	87	72.483	ENSTTRG00000016388	UPF2	69	68.703	Tursiops_truncatus
ENSEBUG00000012448	-	81	84.270	ENSUAMG00000023560	UPF2	69	68.507	Ursus_americanus
ENSEBUG00000012448	-	87	72.483	ENSUMAG00000012953	UPF2	65	68.507	Ursus_maritimus
ENSEBUG00000012448	-	74	87.097	ENSVPAG00000006763	UPF2	55	87.097	Vicugna_pacos
ENSEBUG00000012448	-	87	72.483	ENSVVUG00000006166	UPF2	69	68.657	Vulpes_vulpes
ENSEBUG00000012448	-	89	74.497	ENSXETG00000033103	UPF2	65	74.497	Xenopus_tropicalis
ENSEBUG00000012448	-	93	68.713	ENSXCOG00000011604	UPF2	64	71.523	Xiphophorus_couchianus
ENSEBUG00000012448	-	93	68.862	ENSXMAG00000017209	UPF2	64	71.523	Xiphophorus_maculatus