EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012503 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 59871 bases
Position: chrFYBX02010610.1:4262-64132
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020149	DZF	PF07528.14	2.9e-68	1	1
ENSEBUP00000020166	DZF	PF07528.14	2.9e-68	1	1
ENSEBUP00000020149	zf-met	PF12874.7	5.7e-07	1	1
ENSEBUP00000020166	zf-met	PF12874.7	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020725	-	5408	-	ENSEBUP00000020149	552 (aa)	-	-
ENSEBUT00000020742	-	5290	-	ENSEBUP00000020166	552 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012503	-	69	40.573	ENSEBUG00000001232	strbp	51	40.521
ENSEBUG00000012503	-	55	41.584	ENSEBUG00000010383	-	73	40.764
ENSEBUG00000012503	-	71	42.607	ENSEBUG00000007872	strbp	61	42.607
ENSEBUG00000012503	-	61	47.170	ENSEBUG00000014604	ilf3a	54	44.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012503	-	99	57.618	ENSG00000056097	ZFR	96	54.595	Homo_sapiens
ENSEBUG00000012503	-	94	60.000	ENSACIG00000015926	zfr	53	60.926	Amphilophus_citrinellus
ENSEBUG00000012503	-	99	57.118	ENSACAG00000007880	ZFR	53	57.739	Anolis_carolinensis
ENSEBUG00000012503	-	99	57.793	ENSANAG00000023333	ZFR	53	58.885	Aotus_nancymaae
ENSEBUG00000012503	-	90	60.886	ENSACLG00000016832	zfr	51	61.850	Astatotilapia_calliptera
ENSEBUG00000012503	-	99	56.620	ENSAMXG00000019511	zfr	54	59.028	Astyanax_mexicanus
ENSEBUG00000012503	-	99	57.895	ENSBTAG00000008414	ZFR	53	58.988	Bos_taurus
ENSEBUG00000012503	-	99	57.618	ENSCJAG00000018740	ZFR	57	58.711	Callithrix_jacchus
ENSEBUG00000012503	-	99	57.368	ENSCAFG00020016859	-	51	62.597	Canis_lupus_dingo
ENSEBUG00000012503	-	99	57.895	ENSCHIG00000007710	ZFR	53	58.988	Capra_hircus
ENSEBUG00000012503	-	99	57.443	ENSTSYG00000010670	ZFR	54	58.537	Carlito_syrichta
ENSEBUG00000012503	-	89	55.040	ENSCAPG00000015655	ZFR	50	55.152	Cavia_aperea
ENSEBUG00000012503	-	99	57.793	ENSCCAG00000024473	ZFR	54	58.885	Cebus_capucinus
ENSEBUG00000012503	-	99	57.618	ENSCATG00000038311	ZFR	54	58.711	Cercocebus_atys
ENSEBUG00000012503	-	99	57.268	ENSCLAG00000007408	ZFR	55	58.362	Chinchilla_lanigera
ENSEBUG00000012503	-	99	57.443	ENSCSAG00000017180	ZFR	53	58.537	Chlorocebus_sabaeus
ENSEBUG00000012503	-	89	48.045	ENSCHOG00000003848	ZFR	50	48.045	Choloepus_hoffmanni
ENSEBUG00000012503	-	99	57.243	ENSCPBG00000024211	ZFR	53	58.333	Chrysemys_picta_bellii
ENSEBUG00000012503	-	99	57.618	ENSCANG00000017807	ZFR	54	58.711	Colobus_angolensis_palliatus
ENSEBUG00000012503	-	99	57.443	ENSCGRG00001016009	Zfr	53	58.537	Cricetulus_griseus_chok1gshd
ENSEBUG00000012503	-	99	57.443	ENSCGRG00000001228	Zfr	54	58.537	Cricetulus_griseus_crigri
ENSEBUG00000012503	-	90	60.928	ENSCSEG00000011169	ZFR	51	61.272	Cynoglossus_semilaevis
ENSEBUG00000012503	-	94	59.777	ENSCSEG00000009224	zfr	51	61.850	Cynoglossus_semilaevis
ENSEBUG00000012503	-	96	59.528	ENSCVAG00000016494	zfr	54	59.927	Cyprinodon_variegatus
ENSEBUG00000012503	-	94	60.482	ENSDARG00000027109	zfr	51	61.835	Danio_rerio
ENSEBUG00000012503	-	99	57.243	ENSDNOG00000008852	ZFR	53	58.333	Dasypus_novemcinctus
ENSEBUG00000012503	-	99	57.443	ENSDORG00000016643	Zfr	53	58.537	Dipodomys_ordii
ENSEBUG00000012503	-	90	58.868	ENSELUG00000022743	zfr	51	60.985	Esox_lucius
ENSEBUG00000012503	-	99	57.368	ENSFALG00000002149	ZFR	54	58.464	Ficedula_albicollis
ENSEBUG00000012503	-	97	59.594	ENSFHEG00000012064	zfr	87	60.221	Fundulus_heteroclitus
ENSEBUG00000012503	-	99	58.246	ENSGALG00000003235	-	53	59.337	Gallus_gallus
ENSEBUG00000012503	-	99	57.118	ENSGALG00000034488	-	53	57.941	Gallus_gallus
ENSEBUG00000012503	-	94	60.000	ENSGACG00000005045	zfr	50	59.963	Gasterosteus_aculeatus
ENSEBUG00000012503	-	84	60.543	ENSGAGG00000013544	ZFR	50	57.460	Gopherus_agassizii
ENSEBUG00000012503	-	99	57.618	ENSGGOG00000016302	ZFR	54	58.711	Gorilla_gorilla
ENSEBUG00000012503	-	99	57.268	ENSHGLG00000008088	ZFR	54	58.362	Heterocephalus_glaber_female
ENSEBUG00000012503	-	99	57.268	ENSHGLG00100016776	ZFR	54	58.362	Heterocephalus_glaber_male
ENSEBUG00000012503	-	99	56.620	ENSIPUG00000008192	zfr	53	58.609	Ictalurus_punctatus
ENSEBUG00000012503	-	99	57.618	ENSSTOG00000008742	ZFR	54	58.711	Ictidomys_tridecemlineatus
ENSEBUG00000012503	-	99	50.613	ENSJJAG00000023064	Zfr	52	51.742	Jaculus_jaculus
ENSEBUG00000012503	-	90	61.346	ENSLBEG00000010783	zfr	51	60.405	Labrus_bergylta
ENSEBUG00000012503	-	99	53.608	ENSLACG00000000831	ZFR	53	54.655	Latimeria_chalumnae
ENSEBUG00000012503	-	90	61.014	ENSLAFG00000002308	ZFR	51	61.969	Loxodonta_africana
ENSEBUG00000012503	-	99	57.618	ENSMFAG00000042691	ZFR	54	58.711	Macaca_fascicularis
ENSEBUG00000012503	-	99	57.618	ENSMMUG00000001317	ZFR	53	58.711	Macaca_mulatta
ENSEBUG00000012503	-	99	57.618	ENSMNEG00000029441	ZFR	56	58.711	Macaca_nemestrina
ENSEBUG00000012503	-	99	57.618	ENSMLEG00000028503	ZFR	55	58.711	Mandrillus_leucophaeus
ENSEBUG00000012503	-	94	59.926	ENSMAMG00000017351	zfr	51	61.850	Mastacembelus_armatus
ENSEBUG00000012503	-	90	60.886	ENSMZEG00005021243	zfr	51	61.850	Maylandia_zebra
ENSEBUG00000012503	-	99	51.228	ENSMGAG00000002841	ZFR	55	52.513	Meleagris_gallopavo
ENSEBUG00000012503	-	99	58.144	ENSMAUG00000000976	Zfr	53	58.319	Mesocricetus_auratus
ENSEBUG00000012503	-	99	57.443	ENSMICG00000001244	ZFR	53	58.537	Microcebus_murinus
ENSEBUG00000012503	-	99	57.443	ENSMOCG00000018630	Zfr	53	58.435	Microtus_ochrogaster
ENSEBUG00000012503	-	90	62.646	ENSMMOG00000012585	zfr	50	62.646	Mola_mola
ENSEBUG00000012503	-	96	59.199	ENSMALG00000007123	zfr	51	59.891	Monopterus_albus
ENSEBUG00000012503	-	90	60.819	MGP_CAROLIEiJ_G0019681	Zfr	100	62.081	Mus_caroli
ENSEBUG00000012503	-	99	56.918	ENSMUSG00000022201	Zfr	99	62.081	Mus_musculus
ENSEBUG00000012503	-	90	60.624	MGP_PahariEiJ_G0016057	Zfr	100	61.745	Mus_pahari
ENSEBUG00000012503	-	99	57.093	MGP_SPRETEiJ_G0020574	Zfr	100	62.081	Mus_spretus
ENSEBUG00000012503	-	99	57.368	ENSMLUG00000011797	ZFR	55	58.464	Myotis_lucifugus
ENSEBUG00000012503	-	90	56.814	ENSNBRG00000008378	zfr	50	57.582	Neolamprologus_brichardi
ENSEBUG00000012503	-	99	57.618	ENSNLEG00000014098	ZFR	55	58.711	Nomascus_leucogenys
ENSEBUG00000012503	-	99	57.268	ENSOANG00000014434	ZFR	54	58.188	Ornithorhynchus_anatinus
ENSEBUG00000012503	-	99	57.443	ENSOCUG00000016737	ZFR	53	58.537	Oryctolagus_cuniculus
ENSEBUG00000012503	-	97	61.525	ENSORLG00000017243	zfr	52	61.679	Oryzias_latipes
ENSEBUG00000012503	-	97	61.679	ENSORLG00015005801	zfr	50	61.679	Oryzias_latipes_hsok
ENSEBUG00000012503	-	97	60.036	ENSOMEG00000003336	zfr	50	60.436	Oryzias_melastigma
ENSEBUG00000012503	-	99	54.545	ENSOGAG00000015117	ZFR	53	55.652	Otolemur_garnettii
ENSEBUG00000012503	-	99	57.895	ENSOARG00000012233	ZFR	55	58.988	Ovis_aries
ENSEBUG00000012503	-	99	57.618	ENSPPAG00000027447	ZFR	55	58.711	Pan_paniscus
ENSEBUG00000012503	-	99	57.618	ENSPTRG00000016771	ZFR	54	58.711	Pan_troglodytes
ENSEBUG00000012503	-	99	57.618	ENSPANG00000003729	ZFR	54	58.711	Papio_anubis
ENSEBUG00000012503	-	91	61.583	ENSPKIG00000007596	ZFR	50	61.850	Paramormyrops_kingsleyae
ENSEBUG00000012503	-	90	60.542	ENSPKIG00000016781	ZFR	52	62.355	Paramormyrops_kingsleyae
ENSEBUG00000012503	-	93	59.887	ENSPSIG00000005779	ZFR	95	61.049	Pelodiscus_sinensis
ENSEBUG00000012503	-	89	61.914	ENSPMGG00000015984	zfr	51	61.914	Periophthalmus_magnuspinnatus
ENSEBUG00000012503	-	93	56.903	ENSPEMG00000014573	Zfr	50	58.071	Peromyscus_maniculatus_bairdii
ENSEBUG00000012503	-	94	59.551	ENSPCIG00000020906	ZFR	53	60.708	Phascolarctos_cinereus
ENSEBUG00000012503	-	97	59.107	ENSPFOG00000005931	zfr	51	59.353	Poecilia_formosa
ENSEBUG00000012503	-	55	55.319	ENSPLAG00000001158	zfr	66	55.692	Poecilia_latipinna
ENSEBUG00000012503	-	54	55.247	ENSPMEG00000001926	zfr	63	55.625	Poecilia_mexicana
ENSEBUG00000012503	-	97	58.750	ENSPREG00000011947	zfr	51	58.993	Poecilia_reticulata
ENSEBUG00000012503	-	99	56.743	ENSPPYG00000015378	ZFR	55	57.840	Pongo_abelii
ENSEBUG00000012503	-	89	58.333	ENSPCOG00000000045	ZFR	50	59.538	Propithecus_coquereli
ENSEBUG00000012503	-	90	60.886	ENSPNYG00000006239	zfr	51	61.850	Pundamilia_nyererei
ENSEBUG00000012503	-	99	57.143	ENSPNAG00000025151	zfr	57	59.310	Pygocentrus_nattereri
ENSEBUG00000012503	-	99	57.193	ENSRNOG00000011627	Zfr	97	58.065	Rattus_norvegicus
ENSEBUG00000012503	-	99	57.618	ENSRBIG00000041561	ZFR	54	58.711	Rhinopithecus_bieti
ENSEBUG00000012503	-	99	57.618	ENSRROG00000044008	ZFR	54	58.711	Rhinopithecus_roxellana
ENSEBUG00000012503	-	99	57.618	ENSSBOG00000024150	ZFR	55	58.711	Saimiri_boliviensis_boliviensis
ENSEBUG00000012503	-	94	59.738	ENSSHAG00000015478	ZFR	57	59.245	Sarcophilus_harrisii
ENSEBUG00000012503	-	90	61.464	ENSSMAG00000000320	zfr	51	61.896	Scophthalmus_maximus
ENSEBUG00000012503	-	96	59.818	ENSSDUG00000013882	zfr	53	56.522	Seriola_dumerili
ENSEBUG00000012503	-	96	59.818	ENSSLDG00000000762	zfr	51	62.620	Seriola_lalandi_dorsalis
ENSEBUG00000012503	-	99	57.793	ENSSPUG00000016786	ZFR	55	58.885	Sphenodon_punctatus
ENSEBUG00000012503	-	99	57.193	ENSSSCG00000027681	ZFR	51	62.403	Sus_scrofa
ENSEBUG00000012503	-	99	56.993	ENSTGUG00000001909	ZFR	53	58.290	Taeniopygia_guttata
ENSEBUG00000012503	-	94	58.692	ENSTNIG00000018856	zfr	88	58.692	Tetraodon_nigroviridis
ENSEBUG00000012503	-	97	59.107	ENSXCOG00000009361	zfr	51	59.532	Xiphophorus_couchianus
ENSEBUG00000012503	-	97	58.929	ENSXMAG00000013356	zfr	51	59.353	Xiphophorus_maculatus