EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 60171 bases
Position: chrFYBX02009997.1:467615-527785
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020205	zf-C2H2	PF00096.26	4.3e-35	1	6
ENSEBUP00000020205	zf-C2H2	PF00096.26	4.3e-35	2	6
ENSEBUP00000020205	zf-C2H2	PF00096.26	4.3e-35	3	6
ENSEBUP00000020205	zf-C2H2	PF00096.26	4.3e-35	4	6
ENSEBUP00000020205	zf-C2H2	PF00096.26	4.3e-35	5	6
ENSEBUP00000020205	zf-C2H2	PF00096.26	4.3e-35	6	6
ENSEBUP00000020205	zf-met	PF12874.7	2.3e-22	1	4
ENSEBUP00000020205	zf-met	PF12874.7	2.3e-22	2	4
ENSEBUP00000020205	zf-met	PF12874.7	2.3e-22	3	4
ENSEBUP00000020205	zf-met	PF12874.7	2.3e-22	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020782	-	2286	-	ENSEBUP00000020205	395 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012543	-	94	66.250	ENSEBUG00000008272	-	94	66.875
ENSEBUG00000012543	-	61	67.949	ENSEBUG00000008273	-	85	69.298
ENSEBUG00000012543	-	94	60.843	ENSEBUG00000006092	-	98	62.500
ENSEBUG00000012543	-	58	59.387	ENSEBUG00000014659	-	78	65.639
ENSEBUG00000012543	-	94	66.334	ENSEBUG00000006112	-	96	71.390
ENSEBUG00000012543	-	100	64.138	ENSEBUG00000007054	-	84	72.207
ENSEBUG00000012543	-	52	41.875	ENSEBUG00000002290	-	57	41.875
ENSEBUG00000012543	-	94	76.408	ENSEBUG00000002291	-	94	77.384
ENSEBUG00000012543	-	92	51.875	ENSEBUG00000001741	-	96	51.875
ENSEBUG00000012543	-	53	46.707	ENSEBUG00000007740	-	88	47.500
ENSEBUG00000012543	-	65	65.251	ENSEBUG00000005099	-	87	65.251
ENSEBUG00000012543	-	53	65.806	ENSEBUG00000000735	-	98	66.957
ENSEBUG00000012543	-	92	47.170	ENSEBUG00000005200	-	96	47.170
ENSEBUG00000012543	-	99	67.773	ENSEBUG00000013126	-	99	67.773
ENSEBUG00000012543	-	51	50.000	ENSEBUG00000009291	-	82	51.250
ENSEBUG00000012543	-	94	66.746	ENSEBUG00000015522	-	95	67.476
ENSEBUG00000012543	-	57	49.375	ENSEBUG00000015953	-	63	49.375
ENSEBUG00000012543	-	94	64.833	ENSEBUG00000014227	-	95	65.534
ENSEBUG00000012543	-	79	68.750	ENSEBUG00000010031	-	93	68.750
ENSEBUG00000012543	-	58	50.602	ENSEBUG00000014739	-	87	51.875
ENSEBUG00000012543	-	55	50.000	ENSEBUG00000011479	-	70	51.250
ENSEBUG00000012543	-	94	68.072	ENSEBUG00000007143	-	95	70.000
ENSEBUG00000012543	-	52	46.988	ENSEBUG00000006249	-	83	48.125
ENSEBUG00000012543	-	93	49.541	ENSEBUG00000002032	-	95	49.541
ENSEBUG00000012543	-	58	69.658	ENSEBUG00000001569	-	92	71.053
ENSEBUG00000012543	-	94	67.464	ENSEBUG00000015110	-	99	68.204
ENSEBUG00000012543	-	57	48.734	ENSEBUG00000007266	-	80	48.734
ENSEBUG00000012543	-	51	54.412	ENSEBUG00000012748	-	77	54.412
ENSEBUG00000012543	-	52	47.552	ENSEBUG00000015834	-	88	47.799
ENSEBUG00000012543	-	50	45.223	ENSEBUG00000006080	-	86	45.223
ENSEBUG00000012543	-	84	51.266	ENSEBUG00000016090	-	93	51.266
ENSEBUG00000012543	-	53	51.875	ENSEBUG00000016093	-	65	51.875
ENSEBUG00000012543	-	90	34.831	ENSEBUG00000002586	-	82	34.831
ENSEBUG00000012543	-	69	46.199	ENSEBUG00000007308	ZNF845	92	46.199
ENSEBUG00000012543	-	94	69.761	ENSEBUG00000015472	-	98	70.811
ENSEBUG00000012543	-	65	64.458	ENSEBUG00000012502	-	95	66.250
ENSEBUG00000012543	-	53	50.000	ENSEBUG00000005310	ZNF226	86	51.250
ENSEBUG00000012543	-	61	66.968	ENSEBUG00000006212	-	97	70.044
ENSEBUG00000012543	-	62	48.125	ENSEBUG00000008852	ZNF845	78	52.439
ENSEBUG00000012543	-	55	48.795	ENSEBUG00000006233	-	61	50.000
ENSEBUG00000012543	-	66	70.881	ENSEBUG00000000436	-	98	70.881
ENSEBUG00000012543	-	57	61.491	ENSEBUG00000001308	-	87	61.250
ENSEBUG00000012543	-	92	42.857	ENSEBUG00000000967	-	93	42.857
ENSEBUG00000012543	-	61	53.676	ENSEBUG00000015693	-	87	55.000
ENSEBUG00000012543	-	76	66.265	ENSEBUG00000014309	-	97	68.125
ENSEBUG00000012543	-	53	50.725	ENSEBUG00000005131	-	67	50.725
ENSEBUG00000012543	-	95	62.264	ENSEBUG00000004841	-	99	62.264
ENSEBUG00000012543	-	94	67.866	ENSEBUG00000004844	-	100	68.613
ENSEBUG00000012543	-	57	67.544	ENSEBUG00000016281	-	99	67.544
ENSEBUG00000012543	-	94	67.949	ENSEBUG00000002146	-	95	69.298
ENSEBUG00000012543	-	94	82.432	ENSEBUG00000008392	-	99	83.516
ENSEBUG00000012543	-	61	49.265	ENSEBUG00000004597	-	79	49.265
ENSEBUG00000012543	-	58	47.170	ENSEBUG00000010794	-	88	47.170
ENSEBUG00000012543	-	56	53.012	ENSEBUG00000003512	-	74	54.375
ENSEBUG00000012543	-	55	43.976	ENSEBUG00000003236	-	91	45.000
ENSEBUG00000012543	-	94	74.531	ENSEBUG00000003232	-	91	75.477
ENSEBUG00000012543	-	50	43.976	ENSEBUG00000001525	-	83	45.000
ENSEBUG00000012543	-	92	48.408	ENSEBUG00000014667	-	98	48.125
ENSEBUG00000012543	-	91	46.875	ENSEBUG00000009484	-	81	46.875
ENSEBUG00000012543	-	52	49.375	ENSEBUG00000007012	-	85	49.375
ENSEBUG00000012543	-	80	65.352	ENSEBUG00000000422	-	99	65.352
ENSEBUG00000012543	-	50	45.342	ENSEBUG00000010472	-	51	49.630
ENSEBUG00000012543	-	59	48.795	ENSEBUG00000011112	-	86	51.880
ENSEBUG00000012543	-	94	71.250	ENSEBUG00000011837	-	98	71.250
ENSEBUG00000012543	-	57	51.807	ENSEBUG00000005703	-	85	53.125
ENSEBUG00000012543	-	67	47.015	ENSEBUG00000006847	-	94	47.500
ENSEBUG00000012543	-	56	48.750	ENSEBUG00000005012	-	68	48.750
ENSEBUG00000012543	-	50	47.590	ENSEBUG00000008991	-	81	48.750
ENSEBUG00000012543	-	60	66.960	ENSEBUG00000011331	-	93	66.960
ENSEBUG00000012543	-	59	49.057	ENSEBUG00000004839	-	92	50.625
ENSEBUG00000012543	-	91	39.487	ENSEBUG00000016387	-	77	39.487
ENSEBUG00000012543	-	94	63.158	ENSEBUG00000004026	-	100	63.835
ENSEBUG00000012543	-	94	57.229	ENSEBUG00000015207	-	100	59.119
ENSEBUG00000012543	-	51	51.807	ENSEBUG00000002454	-	85	53.125
ENSEBUG00000012543	-	61	45.625	ENSEBUG00000013157	-	64	47.500
ENSEBUG00000012543	-	52	50.000	ENSEBUG00000014677	-	97	50.000
ENSEBUG00000012543	-	94	82.162	ENSEBUG00000013874	-	88	83.242
ENSEBUG00000012543	-	64	45.679	ENSEBUG00000010756	-	96	45.679
ENSEBUG00000012543	-	58	69.231	ENSEBUG00000003991	-	92	70.614
ENSEBUG00000012543	-	68	50.336	ENSEBUG00000006811	-	95	50.336
ENSEBUG00000012543	-	74	46.203	ENSEBUG00000000860	-	67	45.161
ENSEBUG00000012543	-	53	49.673	ENSEBUG00000003078	-	72	49.673
ENSEBUG00000012543	-	94	63.876	ENSEBUG00000013622	-	100	64.563
ENSEBUG00000012543	-	92	49.541	ENSEBUG00000003555	-	97	49.541
ENSEBUG00000012543	-	56	48.125	ENSEBUG00000004011	-	90	48.227
ENSEBUG00000012543	-	57	49.398	ENSEBUG00000016878	-	82	50.625
ENSEBUG00000012543	-	95	66.585	ENSEBUG00000009330	-	100	66.585
ENSEBUG00000012543	-	100	66.429	ENSEBUG00000007386	-	100	67.089
ENSEBUG00000012543	-	63	44.720	ENSEBUG00000010204	-	85	44.720
ENSEBUG00000012543	-	94	66.910	ENSEBUG00000010357	-	100	66.748
ENSEBUG00000012543	-	58	66.867	ENSEBUG00000006666	-	99	68.750
ENSEBUG00000012543	-	75	49.375	ENSEBUG00000005319	-	86	49.375
ENSEBUG00000012543	-	74	45.833	ENSEBUG00000009383	-	80	45.833
ENSEBUG00000012543	-	95	55.714	ENSEBUG00000011764	-	97	57.500
ENSEBUG00000012543	-	76	43.125	ENSEBUG00000014717	-	74	43.125
ENSEBUG00000012543	-	94	62.048	ENSEBUG00000008039	-	98	63.750
ENSEBUG00000012543	-	55	46.386	ENSEBUG00000009220	-	82	50.000
ENSEBUG00000012543	-	53	40.146	ENSEBUG00000005722	-	83	40.146
ENSEBUG00000012543	-	94	67.419	ENSEBUG00000007563	-	100	72.404
ENSEBUG00000012543	-	64	50.000	ENSEBUG00000015993	-	84	47.468
ENSEBUG00000012543	-	55	50.602	ENSEBUG00000008903	-	81	50.602
ENSEBUG00000012543	-	66	50.602	ENSEBUG00000015456	-	90	51.875
ENSEBUG00000012543	-	59	46.897	ENSEBUG00000003128	-	83	48.148
ENSEBUG00000012543	-	50	51.128	ENSEBUG00000005264	-	75	50.000
ENSEBUG00000012543	-	94	61.446	ENSEBUG00000014388	-	93	65.000
ENSEBUG00000012543	-	53	50.000	ENSEBUG00000003954	-	77	51.250
ENSEBUG00000012543	-	56	45.912	ENSEBUG00000015661	-	75	51.724
ENSEBUG00000012543	-	57	52.800	ENSEBUG00000000642	-	70	42.922
ENSEBUG00000012543	-	100	56.867	ENSEBUG00000014469	-	99	63.473
ENSEBUG00000012543	-	59	47.590	ENSEBUG00000011435	-	82	48.750
ENSEBUG00000012543	-	93	50.943	ENSEBUG00000016292	-	98	50.943
ENSEBUG00000012543	-	94	73.740	ENSEBUG00000011751	-	98	74.663
ENSEBUG00000012543	-	60	66.875	ENSEBUG00000014768	-	81	66.875
ENSEBUG00000012543	-	93	47.794	ENSEBUG00000002721	-	96	47.794
ENSEBUG00000012543	-	94	67.221	ENSEBUG00000008229	-	93	67.952
ENSEBUG00000012543	-	92	64.796	ENSEBUG00000010878	-	92	68.132
ENSEBUG00000012543	-	55	51.875	ENSEBUG00000003590	-	70	51.875
ENSEBUG00000012543	-	53	46.269	ENSEBUG00000011123	-	96	50.000
ENSEBUG00000012543	-	60	72.289	ENSEBUG00000003418	-	91	74.375
ENSEBUG00000012543	-	94	66.507	ENSEBUG00000004992	-	96	67.233
ENSEBUG00000012543	-	59	50.625	ENSEBUG00000004999	-	87	51.875
ENSEBUG00000012543	-	92	52.000	ENSEBUG00000016362	-	96	51.449
ENSEBUG00000012543	-	91	49.265	ENSEBUG00000005913	-	98	49.265
ENSEBUG00000012543	-	53	49.398	ENSEBUG00000014597	-	81	50.625
ENSEBUG00000012543	-	91	47.761	ENSEBUG00000008025	-	95	47.761
ENSEBUG00000012543	-	64	48.148	ENSEBUG00000008185	-	96	48.125
ENSEBUG00000012543	-	50	51.250	ENSEBUG00000006702	-	74	51.250
ENSEBUG00000012543	-	57	55.882	ENSEBUG00000006250	-	74	55.882
ENSEBUG00000012543	-	58	59.375	ENSEBUG00000011728	-	83	60.000
ENSEBUG00000012543	-	92	39.815	ENSEBUG00000007518	-	94	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012543	-	50	35.976	ENSCVAG00000011712	-	53	33.333	Cyprinodon_variegatus
ENSEBUG00000012543	-	54	39.500	ENSCVAG00000018383	-	75	48.684	Cyprinodon_variegatus
ENSEBUG00000012543	-	59	50.000	ENSELUG00000022965	-	65	49.296	Esox_lucius
ENSEBUG00000012543	-	57	43.182	ENSELUG00000000281	-	84	43.182	Esox_lucius
ENSEBUG00000012543	-	50	43.478	ENSGMOG00000016007	-	97	43.478	Gadus_morhua
ENSEBUG00000012543	-	55	45.570	ENSHCOG00000015355	-	86	46.296	Hippocampus_comes
ENSEBUG00000012543	-	54	45.139	ENSHCOG00000019006	-	84	45.139	Hippocampus_comes
ENSEBUG00000012543	-	61	49.686	ENSHCOG00000001242	-	64	49.686	Hippocampus_comes
ENSEBUG00000012543	-	57	47.170	ENSHCOG00000001256	-	65	47.826	Hippocampus_comes
ENSEBUG00000012543	-	52	47.706	ENSHCOG00000015003	-	68	47.706	Hippocampus_comes
ENSEBUG00000012543	-	50	48.235	ENSLBEG00000022059	-	89	48.235	Labrus_bergylta
ENSEBUG00000012543	-	57	50.000	ENSONIG00000011529	-	96	39.378	Oreochromis_niloticus
ENSEBUG00000012543	-	62	45.205	ENSORLG00000023806	-	96	49.324	Oryzias_latipes
ENSEBUG00000012543	-	51	49.405	ENSORLG00000027271	-	95	50.625	Oryzias_latipes
ENSEBUG00000012543	-	63	46.296	ENSORLG00000013863	-	91	47.436	Oryzias_latipes
ENSEBUG00000012543	-	58	44.578	ENSORLG00000026684	-	77	45.625	Oryzias_latipes
ENSEBUG00000012543	-	50	42.208	ENSORLG00000025702	-	69	43.243	Oryzias_latipes
ENSEBUG00000012543	-	51	46.250	ENSORLG00000030610	-	72	46.250	Oryzias_latipes
ENSEBUG00000012543	-	61	42.958	ENSORLG00000012485	-	62	42.767	Oryzias_latipes
ENSEBUG00000012543	-	50	46.358	ENSORLG00000000191	-	90	47.826	Oryzias_latipes
ENSEBUG00000012543	-	50	50.685	ENSORLG00000028381	-	91	48.750	Oryzias_latipes
ENSEBUG00000012543	-	59	45.946	ENSORLG00000001749	-	96	45.946	Oryzias_latipes
ENSEBUG00000012543	-	52	48.503	ENSORLG00000027575	-	70	49.689	Oryzias_latipes
ENSEBUG00000012543	-	62	51.095	ENSORLG00000023744	-	89	50.360	Oryzias_latipes
ENSEBUG00000012543	-	51	49.640	ENSORLG00020000161	-	87	49.640	Oryzias_latipes_hni
ENSEBUG00000012543	-	68	46.753	ENSORLG00020006148	-	54	46.753	Oryzias_latipes_hni
ENSEBUG00000012543	-	54	45.890	ENSORLG00020009419	-	89	46.377	Oryzias_latipes_hni
ENSEBUG00000012543	-	50	47.518	ENSORLG00020008346	-	97	46.897	Oryzias_latipes_hni
ENSEBUG00000012543	-	54	45.570	ENSORLG00020007967	-	85	45.342	Oryzias_latipes_hni
ENSEBUG00000012543	-	51	46.584	ENSORLG00020008424	-	90	46.584	Oryzias_latipes_hni
ENSEBUG00000012543	-	50	47.590	ENSORLG00020017528	-	79	48.750	Oryzias_latipes_hni
ENSEBUG00000012543	-	65	43.195	ENSORLG00020008484	-	90	44.172	Oryzias_latipes_hni
ENSEBUG00000012543	-	51	45.324	ENSORLG00020009184	-	88	42.500	Oryzias_latipes_hni
ENSEBUG00000012543	-	56	45.625	ENSORLG00020010636	-	80	45.625	Oryzias_latipes_hni
ENSEBUG00000012543	-	56	44.526	ENSORLG00020004313	-	52	44.526	Oryzias_latipes_hni
ENSEBUG00000012543	-	50	40.580	ENSORLG00020021196	-	50	42.500	Oryzias_latipes_hni
ENSEBUG00000012543	-	56	53.774	ENSORLG00015010853	-	77	55.208	Oryzias_latipes_hsok
ENSEBUG00000012543	-	54	48.201	ENSORLG00015010933	-	78	48.201	Oryzias_latipes_hsok
ENSEBUG00000012543	-	50	49.398	ENSORLG00015012062	-	71	50.625	Oryzias_latipes_hsok
ENSEBUG00000012543	-	54	45.000	ENSORLG00015010816	-	95	45.000	Oryzias_latipes_hsok
ENSEBUG00000012543	-	61	43.571	ENSORLG00015007132	-	58	44.099	Oryzias_latipes_hsok
ENSEBUG00000012543	-	55	45.390	ENSORLG00015012840	-	53	45.390	Oryzias_latipes_hsok
ENSEBUG00000012543	-	50	42.208	ENSORLG00015016704	-	63	43.243	Oryzias_latipes_hsok
ENSEBUG00000012543	-	54	45.570	ENSORLG00015011153	-	92	47.020	Oryzias_latipes_hsok
ENSEBUG00000012543	-	53	49.630	ENSORLG00015012904	-	78	49.630	Oryzias_latipes_hsok
ENSEBUG00000012543	-	59	38.073	ENSORLG00015012121	-	81	45.000	Oryzias_latipes_hsok
ENSEBUG00000012543	-	67	46.341	ENSORLG00015009782	-	97	49.068	Oryzias_latipes_hsok
ENSEBUG00000012543	-	52	43.860	ENSORLG00015012627	-	84	43.860	Oryzias_latipes_hsok
ENSEBUG00000012543	-	56	46.988	ENSOMEG00000016285	-	78	48.125	Oryzias_melastigma
ENSEBUG00000012543	-	56	38.235	ENSOMEG00000021556	-	75	38.235	Oryzias_melastigma
ENSEBUG00000012543	-	61	49.701	ENSOMEG00000011876	-	74	50.932	Oryzias_melastigma
ENSEBUG00000012543	-	56	50.360	ENSOMEG00000008352	-	83	50.360	Oryzias_melastigma
ENSEBUG00000012543	-	56	47.170	ENSOMEG00000016853	-	64	47.170	Oryzias_melastigma
ENSEBUG00000012543	-	57	45.860	ENSOMEG00000018485	-	72	46.753	Oryzias_melastigma
ENSEBUG00000012543	-	50	47.500	ENSOMEG00000010752	-	64	47.500	Oryzias_melastigma
ENSEBUG00000012543	-	50	48.125	ENSOMEG00000019840	-	55	48.125	Oryzias_melastigma
ENSEBUG00000012543	-	61	48.649	ENSOMEG00000004527	-	96	48.649	Oryzias_melastigma
ENSEBUG00000012543	-	56	42.236	ENSOMEG00000004087	-	64	43.125	Oryzias_melastigma
ENSEBUG00000012543	-	52	47.973	ENSOMEG00000010398	-	91	46.667	Oryzias_melastigma
ENSEBUG00000012543	-	54	50.365	ENSOMEG00000013158	-	78	50.365	Oryzias_melastigma
ENSEBUG00000012543	-	63	43.125	ENSOMEG00000018498	-	99	43.478	Oryzias_melastigma
ENSEBUG00000012543	-	54	42.759	ENSOMEG00000021492	-	73	45.872	Oryzias_melastigma
ENSEBUG00000012543	-	50	48.193	ENSOMEG00000005839	-	69	49.375	Oryzias_melastigma
ENSEBUG00000012543	-	54	47.518	ENSOMEG00000021676	-	85	49.324	Oryzias_melastigma
ENSEBUG00000012543	-	50	48.125	ENSOMEG00000020951	-	78	48.125	Oryzias_melastigma
ENSEBUG00000012543	-	56	47.482	ENSOMEG00000012273	-	70	47.482	Oryzias_melastigma
ENSEBUG00000012543	-	52	46.875	ENSOMEG00000019437	-	82	46.875	Oryzias_melastigma
ENSEBUG00000012543	-	61	47.015	ENSOMEG00000018279	-	83	47.015	Oryzias_melastigma
ENSEBUG00000012543	-	52	44.937	ENSOMEG00000012539	-	92	45.000	Oryzias_melastigma
ENSEBUG00000012543	-	54	45.946	ENSPMGG00000000466	-	89	51.875	Periophthalmus_magnuspinnatus
ENSEBUG00000012543	-	61	47.826	ENSPMGG00000012485	-	69	47.826	Periophthalmus_magnuspinnatus
ENSEBUG00000012543	-	59	43.885	ENSPFOG00000022634	-	94	43.885	Poecilia_formosa
ENSEBUG00000012543	-	69	43.312	ENSPFOG00000008666	-	99	44.697	Poecilia_formosa
ENSEBUG00000012543	-	59	40.000	ENSPFOG00000023439	-	53	40.000	Poecilia_formosa
ENSEBUG00000012543	-	59	40.000	ENSPLAG00000023077	-	56	40.000	Poecilia_latipinna
ENSEBUG00000012543	-	53	46.386	ENSPREG00000016308	-	87	47.799	Poecilia_reticulata
ENSEBUG00000012543	-	50	46.715	ENSPNYG00000005202	-	96	47.826	Pundamilia_nyererei
ENSEBUG00000012543	-	53	39.080	ENSSDUG00000022914	-	67	39.080	Seriola_dumerili
ENSEBUG00000012543	-	57	50.336	ENSSLDG00000001860	-	83	50.336	Seriola_lalandi_dorsalis
ENSEBUG00000012543	-	55	46.667	ENSSLDG00000018033	-	67	46.667	Seriola_lalandi_dorsalis