EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:113138
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 53756 bases
Position: chrFYBX02010617.1:4400764-4454519
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020255	PTS_2-RNA	PF01885.16	1.9e-67	1	1
ENSEBUP00000020261	PTS_2-RNA	PF01885.16	1.9e-67	1	1
ENSEBUP00000020273	PTS_2-RNA	PF01885.16	1.9e-67	1	1
ENSEBUP00000020292	PTS_2-RNA	PF01885.16	5.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020837	-	1386	-	ENSEBUP00000020261	235 (aa)	-	-
ENSEBUT00000020849	-	1253	-	ENSEBUP00000020273	235 (aa)	-	-
ENSEBUT00000020831	-	1069	-	ENSEBUP00000020255	235 (aa)	-	-
ENSEBUT00000020867	-	5069	-	ENSEBUP00000020292	187 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012569	-	94	52.018	ENSG00000149743	TRPT1	100	50.515	Homo_sapiens
ENSEBUG00000012569	-	90	53.529	ENSAPOG00000012925	trpt1	94	53.704	Acanthochromis_polyacanthus
ENSEBUG00000012569	-	90	53.529	ENSAMEG00000018040	TRPT1	87	53.812	Ailuropoda_melanoleuca
ENSEBUG00000012569	-	90	54.118	ENSACIG00000022413	trpt1	91	53.555	Amphilophus_citrinellus
ENSEBUG00000012569	-	90	52.941	ENSAOCG00000001163	trpt1	82	52.995	Amphiprion_ocellaris
ENSEBUG00000012569	-	91	53.216	ENSAPEG00000009873	trpt1	95	53.704	Amphiprion_percula
ENSEBUG00000012569	-	90	53.529	ENSATEG00000014371	trpt1	93	52.113	Anabas_testudineus
ENSEBUG00000012569	-	90	57.396	ENSACAG00000000696	TRPT1	92	57.692	Anolis_carolinensis
ENSEBUG00000012569	-	94	53.363	ENSANAG00000019580	TRPT1	100	48.684	Aotus_nancymaae
ENSEBUG00000012569	-	90	52.353	ENSACLG00000016893	trpt1	91	52.607	Astatotilapia_calliptera
ENSEBUG00000012569	-	94	53.107	ENSAMXG00000010533	trpt1	96	52.489	Astyanax_mexicanus
ENSEBUG00000012569	-	95	51.786	ENSBTAG00000016555	TRPT1	83	52.353	Bos_taurus
ENSEBUG00000012569	-	94	52.444	ENSCJAG00000018169	TRPT1	87	52.444	Callithrix_jacchus
ENSEBUG00000012569	-	90	53.529	ENSCAFG00000014591	TRPT1	85	52.995	Canis_familiaris
ENSEBUG00000012569	-	90	53.529	ENSCAFG00020014101	TRPT1	88	52.995	Canis_lupus_dingo
ENSEBUG00000012569	-	94	52.000	ENSCHIG00000021308	TRPT1	86	54.630	Capra_hircus
ENSEBUG00000012569	-	89	51.786	ENSTSYG00000026766	TRPT1	100	45.029	Carlito_syrichta
ENSEBUG00000012569	-	94	51.955	ENSCAPG00000016934	TRPT1	80	55.440	Cavia_aperea
ENSEBUG00000012569	-	94	51.955	ENSCPOG00000002923	TRPT1	90	50.877	Cavia_porcellus
ENSEBUG00000012569	-	89	52.976	ENSCCAG00000025683	TRPT1	84	52.976	Cebus_capucinus
ENSEBUG00000012569	-	94	52.000	ENSCATG00000031563	TRPT1	87	52.000	Cercocebus_atys
ENSEBUG00000012569	-	94	50.000	ENSCLAG00000016380	TRPT1	90	50.000	Chinchilla_lanigera
ENSEBUG00000012569	-	91	53.456	ENSCSAG00000006952	TRPT1	84	53.456	Chlorocebus_sabaeus
ENSEBUG00000012569	-	90	49.711	ENSCING00000024241	-	84	45.581	Ciona_intestinalis
ENSEBUG00000012569	-	75	49.645	ENSCING00000002405	-	76	49.645	Ciona_intestinalis
ENSEBUG00000012569	-	88	48.214	ENSCSAVG00000011071	-	65	44.907	Ciona_savignyi
ENSEBUG00000012569	-	89	50.000	ENSCSAVG00000003949	-	95	46.047	Ciona_savignyi
ENSEBUG00000012569	-	94	52.444	ENSCANG00000042980	TRPT1	87	52.444	Colobus_angolensis_palliatus
ENSEBUG00000012569	-	89	53.081	ENSCGRG00001008474	Trpt1	84	53.081	Cricetulus_griseus_chok1gshd
ENSEBUG00000012569	-	89	53.081	ENSCGRG00000009793	Trpt1	84	53.081	Cricetulus_griseus_crigri
ENSEBUG00000012569	-	90	53.254	ENSCSEG00000005840	trpt1	91	51.887	Cynoglossus_semilaevis
ENSEBUG00000012569	-	90	55.882	ENSCVAG00000006318	trpt1	96	55.502	Cyprinodon_variegatus
ENSEBUG00000012569	-	94	52.542	ENSDARG00000037628	trpt1	97	52.489	Danio_rerio
ENSEBUG00000012569	-	94	44.796	ENSDNOG00000044923	TRPT1	79	44.796	Dasypus_novemcinctus
ENSEBUG00000012569	-	91	52.535	ENSDORG00000001624	Trpt1	88	52.535	Dipodomys_ordii
ENSEBUG00000012569	-	89	42.353	FBgn0053057	CG33057	92	43.147	Drosophila_melanogaster
ENSEBUG00000012569	-	89	53.810	ENSEASG00005019983	TRPT1	83	53.810	Equus_asinus_asinus
ENSEBUG00000012569	-	90	52.353	ENSECAG00000009917	TRPT1	100	45.355	Equus_caballus
ENSEBUG00000012569	-	94	52.915	ENSEEUG00000012739	TRPT1	87	52.915	Erinaceus_europaeus
ENSEBUG00000012569	-	90	56.213	ENSELUG00000007385	trpt1	95	54.378	Esox_lucius
ENSEBUG00000012569	-	94	52.466	ENSFCAG00000024621	TRPT1	87	52.466	Felis_catus
ENSEBUG00000012569	-	94	50.279	ENSFDAG00000002738	TRPT1	85	51.389	Fukomys_damarensis
ENSEBUG00000012569	-	90	55.294	ENSFHEG00000002434	trpt1	94	53.241	Fundulus_heteroclitus
ENSEBUG00000012569	-	90	51.479	ENSGMOG00000008716	trpt1	93	52.083	Gadus_morhua
ENSEBUG00000012569	-	90	48.810	ENSGALG00000050256	TRPT1	65	51.295	Gallus_gallus
ENSEBUG00000012569	-	90	56.471	ENSGAFG00000016762	trpt1	94	55.189	Gambusia_affinis
ENSEBUG00000012569	-	90	53.529	ENSGACG00000016927	trpt1	96	51.364	Gasterosteus_aculeatus
ENSEBUG00000012569	-	94	52.018	ENSGGOG00000012163	TRPT1	87	52.018	Gorilla_gorilla
ENSEBUG00000012569	-	90	52.941	ENSHBUG00000012772	trpt1	91	53.081	Haplochromis_burtoni
ENSEBUG00000012569	-	94	51.955	ENSHGLG00000013748	TRPT1	90	52.193	Heterocephalus_glaber_female
ENSEBUG00000012569	-	94	51.955	ENSHGLG00100013048	TRPT1	90	52.193	Heterocephalus_glaber_male
ENSEBUG00000012569	-	90	52.941	ENSHCOG00000000218	trpt1	94	50.459	Hippocampus_comes
ENSEBUG00000012569	-	94	51.412	ENSIPUG00000002573	trpt1	96	48.858	Ictalurus_punctatus
ENSEBUG00000012569	-	94	52.915	ENSSTOG00000014285	TRPT1	87	52.915	Ictidomys_tridecemlineatus
ENSEBUG00000012569	-	91	54.419	ENSJJAG00000010855	Trpt1	86	54.673	Jaculus_jaculus
ENSEBUG00000012569	-	90	55.294	ENSKMAG00000004214	trpt1	94	54.167	Kryptolebias_marmoratus
ENSEBUG00000012569	-	90	55.882	ENSLBEG00000005640	trpt1	96	54.091	Labrus_bergylta
ENSEBUG00000012569	-	90	57.396	ENSLACG00000016922	TRPT1	88	55.607	Latimeria_chalumnae
ENSEBUG00000012569	-	90	55.882	ENSLOCG00000001345	trpt1	86	54.976	Lepisosteus_oculatus
ENSEBUG00000012569	-	94	53.363	ENSLAFG00000009075	TRPT1	87	53.363	Loxodonta_africana
ENSEBUG00000012569	-	94	52.000	ENSMFAG00000036828	TRPT1	87	52.000	Macaca_fascicularis
ENSEBUG00000012569	-	94	52.466	ENSMMUG00000012940	TRPT1	87	52.466	Macaca_mulatta
ENSEBUG00000012569	-	94	52.000	ENSMNEG00000033348	TRPT1	87	52.000	Macaca_nemestrina
ENSEBUG00000012569	-	94	52.000	ENSMLEG00000031438	TRPT1	100	47.807	Mandrillus_leucophaeus
ENSEBUG00000012569	-	90	54.118	ENSMAMG00000021617	trpt1	93	53.991	Mastacembelus_armatus
ENSEBUG00000012569	-	90	52.941	ENSMZEG00005004773	trpt1	91	53.081	Maylandia_zebra
ENSEBUG00000012569	-	86	53.086	ENSMAUG00000014107	Trpt1	83	51.429	Mesocricetus_auratus
ENSEBUG00000012569	-	91	54.167	ENSMICG00000016950	TRPT1	84	54.167	Microcebus_murinus
ENSEBUG00000012569	-	89	54.502	ENSMOCG00000021342	Trpt1	84	54.502	Microtus_ochrogaster
ENSEBUG00000012569	-	90	52.941	ENSMMOG00000002896	trpt1	91	51.643	Mola_mola
ENSEBUG00000012569	-	94	53.153	ENSMODG00000010226	TRPT1	94	55.450	Monodelphis_domestica
ENSEBUG00000012569	-	90	55.030	ENSMALG00000012208	trpt1	86	53.991	Monopterus_albus
ENSEBUG00000012569	-	90	54.118	MGP_CAROLIEiJ_G0022627	Trpt1	84	54.976	Mus_caroli
ENSEBUG00000012569	-	90	54.118	ENSMUSG00000047656	Trpt1	84	54.976	Mus_musculus
ENSEBUG00000012569	-	90	55.660	MGP_PahariEiJ_G0014121	Trpt1	85	55.660	Mus_pahari
ENSEBUG00000012569	-	90	54.118	MGP_SPRETEiJ_G0023537	Trpt1	84	54.976	Mus_spretus
ENSEBUG00000012569	-	92	54.260	ENSMPUG00000013272	TRPT1	81	54.260	Mustela_putorius_furo
ENSEBUG00000012569	-	90	52.353	ENSMLUG00000024858	TRPT1	82	53.623	Myotis_lucifugus
ENSEBUG00000012569	-	90	51.176	ENSNGAG00000007665	Trpt1	82	51.479	Nannospalax_galili
ENSEBUG00000012569	-	90	48.108	ENSNBRG00000001528	trpt1	92	49.339	Neolamprologus_brichardi
ENSEBUG00000012569	-	94	42.667	ENSNLEG00000033525	-	87	42.667	Nomascus_leucogenys
ENSEBUG00000012569	-	91	53.529	ENSMEUG00000000943	TRPT1	88	53.363	Notamacropus_eugenii
ENSEBUG00000012569	-	97	51.724	ENSOPRG00000015917	TRPT1	92	51.724	Ochotona_princeps
ENSEBUG00000012569	-	97	52.155	ENSODEG00000015724	TRPT1	92	52.155	Octodon_degus
ENSEBUG00000012569	-	90	52.941	ENSONIG00000005333	trpt1	92	53.302	Oreochromis_niloticus
ENSEBUG00000012569	-	84	48.744	ENSOANG00000010375	TRPT1	98	48.458	Ornithorhynchus_anatinus
ENSEBUG00000012569	-	90	53.254	ENSOCUG00000022244	TRPT1	82	54.106	Oryctolagus_cuniculus
ENSEBUG00000012569	-	90	55.882	ENSORLG00000025159	trpt1	95	54.206	Oryzias_latipes
ENSEBUG00000012569	-	90	55.882	ENSORLG00020018944	trpt1	94	54.930	Oryzias_latipes_hni
ENSEBUG00000012569	-	90	55.882	ENSORLG00015017108	trpt1	81	53.846	Oryzias_latipes_hsok
ENSEBUG00000012569	-	90	55.882	ENSOMEG00000018645	trpt1	95	54.673	Oryzias_melastigma
ENSEBUG00000012569	-	94	52.915	ENSOGAG00000007134	TRPT1	87	52.915	Otolemur_garnettii
ENSEBUG00000012569	-	94	52.000	ENSOARG00000004961	TRPT1	87	52.000	Ovis_aries
ENSEBUG00000012569	-	90	51.765	ENSPPAG00000027600	TRPT1	86	51.596	Pan_paniscus
ENSEBUG00000012569	-	90	53.529	ENSPPRG00000022870	TRPT1	86	52.660	Panthera_pardus
ENSEBUG00000012569	-	89	53.571	ENSPTIG00000018872	TRPT1	98	46.243	Panthera_tigris_altaica
ENSEBUG00000012569	-	90	51.765	ENSPTRG00000003822	TRPT1	86	51.596	Pan_troglodytes
ENSEBUG00000012569	-	94	52.000	ENSPANG00000011001	TRPT1	87	52.000	Papio_anubis
ENSEBUG00000012569	-	90	53.529	ENSPKIG00000008323	trpt1	95	52.055	Paramormyrops_kingsleyae
ENSEBUG00000012569	-	90	55.621	ENSPSIG00000009910	TRPT1	89	55.450	Pelodiscus_sinensis
ENSEBUG00000012569	-	90	55.556	ENSPMGG00000005037	trpt1	92	54.762	Periophthalmus_magnuspinnatus
ENSEBUG00000012569	-	89	53.589	ENSPEMG00000013720	Trpt1	84	53.589	Peromyscus_maniculatus_bairdii
ENSEBUG00000012569	-	90	57.647	ENSPMAG00000001449	trpt1	92	58.031	Petromyzon_marinus
ENSEBUG00000012569	-	91	52.941	ENSPCIG00000008060	TRPT1	89	51.570	Phascolarctos_cinereus
ENSEBUG00000012569	-	90	54.118	ENSPFOG00000009475	trpt1	95	52.778	Poecilia_formosa
ENSEBUG00000012569	-	50	45.161	ENSPLAG00000023925	-	64	45.161	Poecilia_latipinna
ENSEBUG00000012569	-	90	52.941	ENSPMEG00000003682	trpt1	95	51.852	Poecilia_mexicana
ENSEBUG00000012569	-	90	55.294	ENSPREG00000015408	trpt1	95	53.704	Poecilia_reticulata
ENSEBUG00000012569	-	90	52.353	ENSPPYG00000003116	TRPT1	87	52.018	Pongo_abelii
ENSEBUG00000012569	-	90	55.294	ENSPCAG00000000762	TRPT1	82	56.039	Procavia_capensis
ENSEBUG00000012569	-	90	53.529	ENSPCOG00000010370	TRPT1	81	55.072	Propithecus_coquereli
ENSEBUG00000012569	-	90	48.649	ENSPNYG00000014805	trpt1	92	49.115	Pundamilia_nyererei
ENSEBUG00000012569	-	94	53.107	ENSPNAG00000008548	trpt1	96	53.425	Pygocentrus_nattereri
ENSEBUG00000012569	-	90	54.118	ENSRNOG00000023023	Trpt1	85	54.976	Rattus_norvegicus
ENSEBUG00000012569	-	94	52.466	ENSRBIG00000040432	TRPT1	87	52.466	Rhinopithecus_bieti
ENSEBUG00000012569	-	94	52.915	ENSRROG00000044905	TRPT1	87	52.915	Rhinopithecus_roxellana
ENSEBUG00000012569	-	80	37.736	YOL102C	TPT1	77	41.436	Saccharomyces_cerevisiae
ENSEBUG00000012569	-	94	52.466	ENSSBOG00000021466	TRPT1	87	52.466	Saimiri_boliviensis_boliviensis
ENSEBUG00000012569	-	90	56.471	ENSSFOG00015005844	trpt1	95	54.206	Scleropages_formosus
ENSEBUG00000012569	-	90	52.353	ENSSMAG00000017744	trpt1	94	52.113	Scophthalmus_maximus
ENSEBUG00000012569	-	90	51.765	ENSSDUG00000017106	trpt1	92	51.887	Seriola_dumerili
ENSEBUG00000012569	-	90	51.176	ENSSLDG00000015957	trpt1	89	52.885	Seriola_lalandi_dorsalis
ENSEBUG00000012569	-	90	52.941	ENSSPAG00000007557	trpt1	74	50.802	Stegastes_partitus
ENSEBUG00000012569	-	92	53.917	ENSSSCG00000013040	TRPT1	83	53.917	Sus_scrofa
ENSEBUG00000012569	-	90	54.118	ENSTRUG00000023723	trpt1	92	53.521	Takifugu_rubripes
ENSEBUG00000012569	-	90	55.882	ENSTNIG00000003381	trpt1	92	54.630	Tetraodon_nigroviridis
ENSEBUG00000012569	-	90	51.176	ENSTBEG00000006023	TRPT1	81	52.174	Tupaia_belangeri
ENSEBUG00000012569	-	94	50.673	ENSTTRG00000010252	TRPT1	87	50.673	Tursiops_truncatus
ENSEBUG00000012569	-	91	54.167	ENSUAMG00000015208	TRPT1	84	54.167	Ursus_americanus
ENSEBUG00000012569	-	95	53.125	ENSUMAG00000001410	TRPT1	84	54.167	Ursus_maritimus
ENSEBUG00000012569	-	91	54.167	ENSVVUG00000029774	TRPT1	88	54.167	Vulpes_vulpes
ENSEBUG00000012569	-	92	54.286	ENSXETG00000007196	trpt1	91	52.582	Xenopus_tropicalis
ENSEBUG00000012569	-	94	53.409	ENSXCOG00000001614	trpt1	97	53.182	Xiphophorus_couchianus
ENSEBUG00000012569	-	90	54.706	ENSXMAG00000003142	trpt1	94	54.245	Xiphophorus_maculatus