EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012629 (Gene tree)
Gene ID: -
Gene Symbol: rasef (1 of many)
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 92975 bases
Position: chrFYBX02010500.1:915944-1008918
Accession: ZDB-GENE-081105-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020368	MMR_HSR1	PF01926.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000020944	-	2613	-	ENSEBUP00000020368	694 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012629's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012629	rasef	63	53.719	ENSEBUG00000012179	rasef	63	64.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012629	rasef	99	45.576	ENSG00000165105	RASEF	99	45.174	Homo_sapiens
ENSEBUG00000012629	rasef	99	41.460	ENSAPOG00000024369	rasef	77	66.327	Acanthochromis_polyacanthus
ENSEBUG00000012629	rasef	96	46.434	ENSAMEG00000009467	RASEF	96	46.434	Ailuropoda_melanoleuca
ENSEBUG00000012629	rasef	96	41.945	ENSACIG00000005549	rasef	98	42.879	Amphilophus_citrinellus
ENSEBUG00000012629	rasef	96	42.348	ENSAOCG00000011464	rasef	96	42.348	Amphiprion_ocellaris
ENSEBUG00000012629	rasef	97	42.779	ENSAPEG00000003461	rasef	95	42.857	Amphiprion_percula
ENSEBUG00000012629	rasef	95	42.897	ENSATEG00000015032	rasef	99	42.897	Anabas_testudineus
ENSEBUG00000012629	rasef	83	50.408	ENSAPLG00000013969	RASEF	90	51.897	Anas_platyrhynchos
ENSEBUG00000012629	rasef	97	48.222	ENSACAG00000002155	RASEF	95	48.143	Anolis_carolinensis
ENSEBUG00000012629	rasef	99	46.917	ENSANAG00000035226	RASEF	99	46.846	Aotus_nancymaae
ENSEBUG00000012629	rasef	99	42.895	ENSACLG00000017818	rasef	99	42.761	Astatotilapia_calliptera
ENSEBUG00000012629	rasef	99	42.623	ENSAMXG00000011411	rasef	93	42.857	Astyanax_mexicanus
ENSEBUG00000012629	rasef	97	46.409	ENSBTAG00000021751	RASEF	96	46.409	Bos_taurus
ENSEBUG00000012629	rasef	98	47.196	ENSCJAG00000003547	RASEF	96	47.310	Callithrix_jacchus
ENSEBUG00000012629	rasef	83	49.342	ENSCAFG00000001453	RASEF	89	46.019	Canis_familiaris
ENSEBUG00000012629	rasef	98	45.964	ENSCAFG00020023859	RASEF	97	46.185	Canis_lupus_dingo
ENSEBUG00000012629	rasef	97	45.994	ENSCHIG00000020336	RASEF	94	49.667	Capra_hircus
ENSEBUG00000012629	rasef	69	52.242	ENSTSYG00000006987	RASEF	96	52.242	Carlito_syrichta
ENSEBUG00000012629	rasef	61	46.137	ENSCAPG00000010585	-	93	46.137	Cavia_aperea
ENSEBUG00000012629	rasef	81	50.168	ENSCPOG00000005004	RASEF	97	50.168	Cavia_porcellus
ENSEBUG00000012629	rasef	99	46.351	ENSCCAG00000031624	RASEF	98	46.496	Cebus_capucinus
ENSEBUG00000012629	rasef	99	46.030	ENSCSAG00000007663	RASEF	99	46.030	Chlorocebus_sabaeus
ENSEBUG00000012629	rasef	83	47.438	ENSCHOG00000001831	RASEF	99	47.438	Choloepus_hoffmanni
ENSEBUG00000012629	rasef	99	47.568	ENSCPBG00000019037	RASEF	99	47.568	Chrysemys_picta_bellii
ENSEBUG00000012629	rasef	99	45.174	ENSCANG00000034081	RASEF	99	45.174	Colobus_angolensis_palliatus
ENSEBUG00000012629	rasef	78	48.348	ENSCGRG00001001324	Rasef	93	48.668	Cricetulus_griseus_chok1gshd
ENSEBUG00000012629	rasef	75	48.551	ENSCGRG00000006455	Rasef	94	48.980	Cricetulus_griseus_crigri
ENSEBUG00000012629	rasef	93	38.150	ENSCSEG00000017898	rasef	94	39.010	Cynoglossus_semilaevis
ENSEBUG00000012629	rasef	96	45.902	ENSCVAG00000006168	rasef	89	45.902	Cyprinodon_variegatus
ENSEBUG00000012629	rasef	96	44.798	ENSDARG00000076250	rasef	97	42.705	Danio_rerio
ENSEBUG00000012629	rasef	97	46.483	ENSDNOG00000006002	RASEF	86	46.910	Dasypus_novemcinctus
ENSEBUG00000012629	rasef	73	51.017	ENSDORG00000015570	Rasef	97	50.926	Dipodomys_ordii
ENSEBUG00000012629	rasef	97	47.324	ENSEASG00005015967	RASEF	92	49.914	Equus_asinus_asinus
ENSEBUG00000012629	rasef	98	47.869	ENSECAG00000000324	RASEF	93	50.087	Equus_caballus
ENSEBUG00000012629	rasef	78	44.154	ENSEEUG00000008455	RASEF	100	44.154	Erinaceus_europaeus
ENSEBUG00000012629	rasef	99	46.289	ENSFCAG00000002416	RASEF	98	46.341	Felis_catus
ENSEBUG00000012629	rasef	83	50.081	ENSFALG00000003611	RASEF	94	51.541	Ficedula_albicollis
ENSEBUG00000012629	rasef	80	49.831	ENSFDAG00000013428	RASEF	97	49.831	Fukomys_damarensis
ENSEBUG00000012629	rasef	95	43.195	ENSFHEG00000022470	rasef	91	43.109	Fundulus_heteroclitus
ENSEBUG00000012629	rasef	95	42.663	ENSGMOG00000010090	rasef	99	43.313	Gadus_morhua
ENSEBUG00000012629	rasef	99	47.115	ENSGALG00000012576	RASEF	97	48.295	Gallus_gallus
ENSEBUG00000012629	rasef	99	42.483	ENSGAFG00000013735	rasef	92	43.247	Gambusia_affinis
ENSEBUG00000012629	rasef	97	43.343	ENSGACG00000007528	rasef	94	43.123	Gasterosteus_aculeatus
ENSEBUG00000012629	rasef	99	47.490	ENSGAGG00000007338	RASEF	100	50.998	Gopherus_agassizii
ENSEBUG00000012629	rasef	99	45.710	ENSGGOG00000006651	RASEF	99	45.442	Gorilla_gorilla
ENSEBUG00000012629	rasef	99	43.077	ENSHBUG00000010345	rasef	94	43.077	Haplochromis_burtoni
ENSEBUG00000012629	rasef	99	46.939	ENSHGLG00000000399	RASEF	99	46.939	Heterocephalus_glaber_female
ENSEBUG00000012629	rasef	82	49.507	ENSHGLG00100008043	RASEF	99	49.507	Heterocephalus_glaber_male
ENSEBUG00000012629	rasef	97	42.730	ENSHCOG00000010976	rasef	94	42.687	Hippocampus_comes
ENSEBUG00000012629	rasef	97	44.269	ENSIPUG00000008768	rasef	93	43.804	Ictalurus_punctatus
ENSEBUG00000012629	rasef	99	45.405	ENSSTOG00000004311	RASEF	98	45.405	Ictidomys_tridecemlineatus
ENSEBUG00000012629	rasef	80	48.818	ENSJJAG00000023215	Rasef	97	48.818	Jaculus_jaculus
ENSEBUG00000012629	rasef	83	60.317	ENSKMAG00000021106	rasef	83	43.978	Kryptolebias_marmoratus
ENSEBUG00000012629	rasef	97	42.730	ENSLBEG00000021098	-	94	42.922	Labrus_bergylta
ENSEBUG00000012629	rasef	95	49.140	ENSLACG00000010849	RASEF	93	48.127	Latimeria_chalumnae
ENSEBUG00000012629	rasef	99	48.324	ENSLOCG00000002094	rasef	94	49.343	Lepisosteus_oculatus
ENSEBUG00000012629	rasef	82	49.340	ENSLAFG00000010552	RASEF	99	49.340	Loxodonta_africana
ENSEBUG00000012629	rasef	99	45.442	ENSMFAG00000046414	RASEF	95	45.810	Macaca_fascicularis
ENSEBUG00000012629	rasef	99	45.527	ENSMNEG00000044341	RASEF	99	45.260	Macaca_nemestrina
ENSEBUG00000012629	rasef	99	45.576	ENSMLEG00000034579	RASEF	99	45.442	Mandrillus_leucophaeus
ENSEBUG00000012629	rasef	88	41.100	ENSMAMG00000001536	rasef	98	40.644	Mastacembelus_armatus
ENSEBUG00000012629	rasef	96	42.411	ENSMZEG00005004819	rasef	99	42.411	Maylandia_zebra
ENSEBUG00000012629	rasef	82	47.533	ENSMAUG00000010820	Rasef	99	47.533	Mesocricetus_auratus
ENSEBUG00000012629	rasef	98	45.479	ENSMICG00000011836	RASEF	98	45.676	Microcebus_murinus
ENSEBUG00000012629	rasef	81	49.317	ENSMOCG00000000943	Rasef	94	50.564	Microtus_ochrogaster
ENSEBUG00000012629	rasef	96	41.100	ENSMMOG00000000102	rasef	96	40.230	Mola_mola
ENSEBUG00000012629	rasef	96	45.927	ENSMODG00000009037	RASEF	94	45.980	Monodelphis_domestica
ENSEBUG00000012629	rasef	97	42.569	ENSMALG00000009830	rasef	93	43.308	Monopterus_albus
ENSEBUG00000012629	rasef	84	48.534	MGP_CAROLIEiJ_G0026109	Rasef	99	49.556	Mus_caroli
ENSEBUG00000012629	rasef	99	47.441	ENSMUSG00000043003	Rasef	99	49.911	Mus_musculus
ENSEBUG00000012629	rasef	82	49.100	MGP_PahariEiJ_G0028447	Rasef	99	49.649	Mus_pahari
ENSEBUG00000012629	rasef	82	49.091	MGP_SPRETEiJ_G0027075	Rasef	99	49.734	Mus_spretus
ENSEBUG00000012629	rasef	74	49.541	ENSMPUG00000013070	RASEF	96	49.174	Mustela_putorius_furo
ENSEBUG00000012629	rasef	97	46.768	ENSMLUG00000013108	RASEF	99	45.772	Myotis_lucifugus
ENSEBUG00000012629	rasef	75	49.455	ENSNGAG00000014878	Rasef	94	49.907	Nannospalax_galili
ENSEBUG00000012629	rasef	96	41.543	ENSNBRG00000012335	rasef	99	41.543	Neolamprologus_brichardi
ENSEBUG00000012629	rasef	99	45.845	ENSNLEG00000003245	RASEF	99	45.442	Nomascus_leucogenys
ENSEBUG00000012629	rasef	97	44.552	ENSMEUG00000016412	RASEF	94	45.084	Notamacropus_eugenii
ENSEBUG00000012629	rasef	82	46.154	ENSOPRG00000002742	-	80	44.444	Ochotona_princeps
ENSEBUG00000012629	rasef	99	43.077	ENSONIG00000015021	rasef	99	44.522	Oreochromis_niloticus
ENSEBUG00000012629	rasef	96	43.707	ENSOANG00000010379	RASEF	94	43.611	Ornithorhynchus_anatinus
ENSEBUG00000012629	rasef	99	46.309	ENSOCUG00000001548	RASEF	98	46.703	Oryctolagus_cuniculus
ENSEBUG00000012629	rasef	99	43.750	ENSORLG00000005076	rasef	89	43.750	Oryzias_latipes
ENSEBUG00000012629	rasef	99	43.750	ENSORLG00020020049	rasef	89	43.750	Oryzias_latipes_hni
ENSEBUG00000012629	rasef	99	43.750	ENSORLG00015008479	rasef	89	43.750	Oryzias_latipes_hsok
ENSEBUG00000012629	rasef	99	45.312	ENSOMEG00000023457	rasef	98	42.420	Oryzias_melastigma
ENSEBUG00000012629	rasef	81	50.000	ENSOGAG00000012724	RASEF	95	50.346	Otolemur_garnettii
ENSEBUG00000012629	rasef	97	45.856	ENSOARG00000009073	RASEF	90	46.271	Ovis_aries
ENSEBUG00000012629	rasef	99	46.228	ENSPPAG00000042152	RASEF	99	46.291	Pan_paniscus
ENSEBUG00000012629	rasef	99	45.833	ENSPPRG00000008487	RASEF	94	47.405	Panthera_pardus
ENSEBUG00000012629	rasef	86	48.892	ENSPTIG00000006676	RASEF	90	52.410	Panthera_tigris_altaica
ENSEBUG00000012629	rasef	99	46.228	ENSPTRG00000021052	RASEF	99	46.291	Pan_troglodytes
ENSEBUG00000012629	rasef	99	45.710	ENSPANG00000024899	RASEF	99	45.442	Papio_anubis
ENSEBUG00000012629	rasef	84	49.522	ENSPSIG00000017699	RASEF	91	50.839	Pelodiscus_sinensis
ENSEBUG00000012629	rasef	96	37.761	ENSPMGG00000015499	rasef	86	78.218	Periophthalmus_magnuspinnatus
ENSEBUG00000012629	rasef	82	48.033	ENSPEMG00000002797	Rasef	99	48.682	Peromyscus_maniculatus_bairdii
ENSEBUG00000012629	rasef	96	46.226	ENSPMAG00000001634	rasef	99	46.226	Petromyzon_marinus
ENSEBUG00000012629	rasef	97	47.172	ENSPCIG00000027655	RASEF	94	47.191	Phascolarctos_cinereus
ENSEBUG00000012629	rasef	99	42.916	ENSPFOG00000018924	rasef	95	43.830	Poecilia_formosa
ENSEBUG00000012629	rasef	80	43.031	ENSPLAG00000022907	RASEF	93	43.082	Poecilia_latipinna
ENSEBUG00000012629	rasef	96	43.696	ENSPMEG00000006546	rasef	95	43.741	Poecilia_mexicana
ENSEBUG00000012629	rasef	96	49.153	ENSPREG00000018728	rasef	88	49.153	Poecilia_reticulata
ENSEBUG00000012629	rasef	99	45.576	ENSPPYG00000019320	RASEF	99	45.576	Pongo_abelii
ENSEBUG00000012629	rasef	97	46.196	ENSPCOG00000022979	RASEF	96	46.196	Propithecus_coquereli
ENSEBUG00000012629	rasef	99	46.299	ENSPVAG00000003682	RASEF	99	46.164	Pteropus_vampyrus
ENSEBUG00000012629	rasef	99	39.834	ENSPNYG00000010579	rasef	94	41.913	Pundamilia_nyererei
ENSEBUG00000012629	rasef	99	43.054	ENSPNAG00000016447	rasef	95	43.597	Pygocentrus_nattereri
ENSEBUG00000012629	rasef	99	46.547	ENSRNOG00000024190	Rasef	98	46.547	Rattus_norvegicus
ENSEBUG00000012629	rasef	98	45.816	ENSRBIG00000039516	RASEF	97	45.816	Rhinopithecus_bieti
ENSEBUG00000012629	rasef	96	45.938	ENSRROG00000044397	RASEF	99	45.938	Rhinopithecus_roxellana
ENSEBUG00000012629	rasef	83	49.425	ENSSBOG00000029298	RASEF	80	49.425	Saimiri_boliviensis_boliviensis
ENSEBUG00000012629	rasef	96	47.033	ENSSFOG00015009014	rasef	95	47.093	Scleropages_formosus
ENSEBUG00000012629	rasef	99	46.667	ENSSMAG00000000942	rasef	95	42.179	Scophthalmus_maximus
ENSEBUG00000012629	rasef	65	74.691	ENSSDUG00000022228	rasef	67	74.699	Seriola_dumerili
ENSEBUG00000012629	rasef	96	47.458	ENSSLDG00000001784	rasef	87	47.458	Seriola_lalandi_dorsalis
ENSEBUG00000012629	rasef	99	45.839	ENSSPUG00000002899	RASEF	94	47.571	Sphenodon_punctatus
ENSEBUG00000012629	rasef	85	58.366	ENSSPAG00000002442	rasef	90	46.154	Stegastes_partitus
ENSEBUG00000012629	rasef	83	49.342	ENSSSCG00000040707	-	90	49.342	Sus_scrofa
ENSEBUG00000012629	rasef	99	47.469	ENSTGUG00000003216	RASEF	95	48.424	Taeniopygia_guttata
ENSEBUG00000012629	rasef	97	41.094	ENSTRUG00000011541	rasef	95	41.044	Takifugu_rubripes
ENSEBUG00000012629	rasef	97	42.041	ENSTNIG00000006010	rasef	95	42.207	Tetraodon_nigroviridis
ENSEBUG00000012629	rasef	99	41.001	ENSTTRG00000002061	RASEF	98	41.001	Tursiops_truncatus
ENSEBUG00000012629	rasef	97	47.167	ENSUAMG00000021591	RASEF	96	47.450	Ursus_americanus
ENSEBUG00000012629	rasef	78	50.524	ENSUMAG00000004670	RASEF	87	50.893	Ursus_maritimus
ENSEBUG00000012629	rasef	81	49.747	ENSVVUG00000029736	RASEF	93	50.784	Vulpes_vulpes
ENSEBUG00000012629	rasef	99	45.504	ENSXETG00000016758	mgc147600	94	46.505	Xenopus_tropicalis
ENSEBUG00000012629	rasef	78	42.124	ENSXCOG00000005178	rasef	85	42.456	Xiphophorus_couchianus
ENSEBUG00000012629	rasef	96	46.875	ENSXMAG00000015129	rasef	92	46.875	Xiphophorus_maculatus