EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012680 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 89872 bases
Position: chrFYBX02010293.1:5971301-6061172
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020462	MMR_HSR1	PF01926.23	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021037	-	4161	-	ENSEBUP00000020462	240 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012680	-	50	34.127	ENSEBUG00000014186	-	75	32.143
ENSEBUG00000012680	-	60	32.653	ENSEBUG00000003784	rhebl1	89	32.653
ENSEBUG00000012680	-	78	32.673	ENSEBUG00000004967	rab9b	98	32.673
ENSEBUG00000012680	-	68	41.104	ENSEBUG00000015447	-	75	41.104
ENSEBUG00000012680	-	68	31.288	ENSEBUG00000015012	kras	86	31.098
ENSEBUG00000012680	-	68	35.714	ENSEBUG00000009003	-	73	35.714
ENSEBUG00000012680	-	78	37.500	ENSEBUG00000015845	-	90	37.500
ENSEBUG00000012680	-	73	34.783	ENSEBUG00000003339	-	91	34.783
ENSEBUG00000012680	-	67	30.625	ENSEBUG00000010861	-	64	30.625
ENSEBUG00000012680	-	67	36.810	ENSEBUG00000004971	-	75	36.810
ENSEBUG00000012680	-	68	35.366	ENSEBUG00000006581	rab12	80	35.366
ENSEBUG00000012680	-	66	32.515	ENSEBUG00000008934	rab36	62	32.515
ENSEBUG00000012680	-	68	39.877	ENSEBUG00000011775	rab11ba	76	40.000
ENSEBUG00000012680	-	63	31.646	ENSEBUG00000002259	RAB29	75	31.646
ENSEBUG00000012680	-	83	44.878	ENSEBUG00000014794	rab5c	97	44.878
ENSEBUG00000012680	-	68	38.650	ENSEBUG00000007493	rab11a	75	38.650
ENSEBUG00000012680	-	66	36.076	ENSEBUG00000000963	-	86	35.948
ENSEBUG00000012680	-	71	41.520	ENSEBUG00000015886	-	84	41.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012680	-	71	36.047	ENSAPOG00000011363	-	74	36.047	Acanthochromis_polyacanthus
ENSEBUG00000012680	-	70	40.000	ENSPMGG00000019723	-	84	40.000	Periophthalmus_magnuspinnatus
ENSEBUG00000012680	-	72	36.047	ENSPMAG00000001403	-	86	36.047	Petromyzon_marinus
ENSEBUG00000012680	-	68	47.305	YOR089C	VPS21	80	47.305	Saccharomyces_cerevisiae
ENSEBUG00000012680	-	70	42.775	YNL093W	-	77	42.775	Saccharomyces_cerevisiae
ENSEBUG00000012680	-	66	37.888	ENSTNIG00000017844	-	84	37.888	Tetraodon_nigroviridis