EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012747 (Gene tree)
Gene ID: -
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 114949 bases
Position: chrFYBX02009617.1:688337-803285
Accession: ZDB-GENE-051120-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020610	Nop53	PF07767.11	1.5e-82	1	1
ENSEBUP00000020593	Nop53	PF07767.11	1.5e-82	1	1
ENSEBUP00000020633	Nop53	PF07767.11	1.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021186	-	2582	-	ENSEBUP00000020610	448 (aa)	-	-
ENSEBUT00000021209	-	1299	-	ENSEBUP00000020633	404 (aa)	-	-
ENSEBUT00000021169	-	1358	-	ENSEBUP00000020593	449 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012747	nop53	91	43.119	ENSG00000105373	NOP53	97	70.000	Homo_sapiens
ENSEBUG00000012747	nop53	90	40.566	ENSAPOG00000006446	nop53	93	41.553	Acanthochromis_polyacanthus
ENSEBUG00000012747	nop53	90	40.929	ENSAMEG00000015214	NOP53	95	40.084	Ailuropoda_melanoleuca
ENSEBUG00000012747	nop53	76	39.548	ENSACIG00000002467	nop53	99	40.113	Amphilophus_citrinellus
ENSEBUG00000012747	nop53	90	40.662	ENSAOCG00000007002	nop53	93	41.419	Amphiprion_ocellaris
ENSEBUG00000012747	nop53	90	40.802	ENSAPEG00000024564	nop53	93	41.553	Amphiprion_percula
ENSEBUG00000012747	nop53	89	39.846	ENSATEG00000021860	nop53	93	42.857	Anabas_testudineus
ENSEBUG00000012747	nop53	63	44.068	ENSACAG00000011362	-	99	43.878	Anolis_carolinensis
ENSEBUG00000012747	nop53	92	41.387	ENSANAG00000007933	NOP53	96	41.216	Aotus_nancymaae
ENSEBUG00000012747	nop53	90	43.262	ENSACLG00000011832	nop53	93	44.419	Astatotilapia_calliptera
ENSEBUG00000012747	nop53	89	43.990	ENSAMXG00000014883	nop53	94	43.807	Astyanax_mexicanus
ENSEBUG00000012747	nop53	91	43.836	ENSBTAG00000021192	NOP53	86	42.733	Bos_taurus
ENSEBUG00000012747	nop53	91	45.227	ENSCJAG00000011385	NOP53	97	43.460	Callithrix_jacchus
ENSEBUG00000012747	nop53	90	44.394	ENSCAFG00000004080	NOP53	93	44.222	Canis_familiaris
ENSEBUG00000012747	nop53	90	43.981	ENSCHIG00000009393	NOP53	95	43.077	Capra_hircus
ENSEBUG00000012747	nop53	90	39.907	ENSTSYG00000036631	NOP53	94	38.546	Carlito_syrichta
ENSEBUG00000012747	nop53	83	44.416	ENSCAPG00000013148	NOP53	99	43.655	Cavia_aperea
ENSEBUG00000012747	nop53	90	44.419	ENSCPOG00000015665	NOP53	95	43.046	Cavia_porcellus
ENSEBUG00000012747	nop53	91	44.111	ENSCCAG00000025477	NOP53	97	42.521	Cebus_capucinus
ENSEBUG00000012747	nop53	91	43.519	ENSCATG00000032842	NOP53	97	42.398	Cercocebus_atys
ENSEBUG00000012747	nop53	91	44.266	ENSCLAG00000001860	NOP53	95	42.702	Chinchilla_lanigera
ENSEBUG00000012747	nop53	91	42.890	ENSCSAG00000002928	NOP53	97	42.521	Chlorocebus_sabaeus
ENSEBUG00000012747	nop53	85	40.250	ENSCPBG00000009047	NOP53	95	40.099	Chrysemys_picta_bellii
ENSEBUG00000012747	nop53	89	34.625	ENSCING00000021395	-	100	35.648	Ciona_intestinalis
ENSEBUG00000012747	nop53	89	37.857	ENSCSAVG00000006009	-	100	38.673	Ciona_savignyi
ENSEBUG00000012747	nop53	91	39.675	ENSCANG00000039648	NOP53	93	40.136	Colobus_angolensis_palliatus
ENSEBUG00000012747	nop53	91	41.839	ENSCGRG00001019033	Nop53	95	41.485	Cricetulus_griseus_chok1gshd
ENSEBUG00000012747	nop53	95	39.823	ENSCSEG00000014834	nop53	96	38.976	Cynoglossus_semilaevis
ENSEBUG00000012747	nop53	90	41.958	ENSCVAG00000005940	nop53	94	42.377	Cyprinodon_variegatus
ENSEBUG00000012747	nop53	89	44.630	ENSDARG00000100452	nop53	99	42.541	Danio_rerio
ENSEBUG00000012747	nop53	91	44.316	ENSDNOG00000005165	NOP53	86	43.392	Dasypus_novemcinctus
ENSEBUG00000012747	nop53	55	38.272	ENSDORG00000016339	-	92	37.218	Dipodomys_ordii
ENSEBUG00000012747	nop53	96	44.858	ENSEASG00005004345	NOP53	91	43.982	Equus_asinus_asinus
ENSEBUG00000012747	nop53	96	43.723	ENSECAG00000026850	NOP53	91	43.290	Equus_caballus
ENSEBUG00000012747	nop53	82	75.385	ENSEEUG00000005287	NOP53	82	75.385	Erinaceus_europaeus
ENSEBUG00000012747	nop53	90	42.619	ENSELUG00000001525	nop53	98	41.886	Esox_lucius
ENSEBUG00000012747	nop53	91	42.955	ENSFCAG00000010861	NOP53	95	41.991	Felis_catus
ENSEBUG00000012747	nop53	90	38.208	ENSFDAG00000010478	NOP53	94	37.808	Fukomys_damarensis
ENSEBUG00000012747	nop53	90	42.217	ENSFHEG00000017763	nop53	92	42.404	Fundulus_heteroclitus
ENSEBUG00000012747	nop53	89	37.561	ENSGMOG00000014299	nop53	94	37.617	Gadus_morhua
ENSEBUG00000012747	nop53	91	41.913	ENSGALG00000039473	NOP53	77	41.542	Gallus_gallus
ENSEBUG00000012747	nop53	90	42.326	ENSGAFG00000013301	nop53	93	42.723	Gambusia_affinis
ENSEBUG00000012747	nop53	90	41.232	ENSGACG00000005766	nop53	94	39.456	Gasterosteus_aculeatus
ENSEBUG00000012747	nop53	90	43.160	ENSGGOG00000005462	NOP53	97	41.253	Gorilla_gorilla
ENSEBUG00000012747	nop53	88	41.728	ENSGGOG00000024728	-	92	41.055	Gorilla_gorilla
ENSEBUG00000012747	nop53	90	43.262	ENSHBUG00000023625	nop53	93	44.419	Haplochromis_burtoni
ENSEBUG00000012747	nop53	90	43.418	ENSHGLG00000018240	NOP53	95	42.198	Heterocephalus_glaber_female
ENSEBUG00000012747	nop53	71	61.667	ENSHGLG00100015613	NOP53	94	61.667	Heterocephalus_glaber_male
ENSEBUG00000012747	nop53	90	40.000	ENSHCOG00000017133	nop53	94	39.427	Hippocampus_comes
ENSEBUG00000012747	nop53	89	44.578	ENSIPUG00000008154	nop53	87	43.860	Ictalurus_punctatus
ENSEBUG00000012747	nop53	91	44.495	ENSSTOG00000022092	NOP53	95	43.107	Ictidomys_tridecemlineatus
ENSEBUG00000012747	nop53	88	44.181	ENSJJAG00000007854	Nop53	97	41.880	Jaculus_jaculus
ENSEBUG00000012747	nop53	90	39.031	ENSKMAG00000020756	nop53	93	41.667	Kryptolebias_marmoratus
ENSEBUG00000012747	nop53	90	43.705	ENSLBEG00000011432	nop53	93	44.165	Labrus_bergylta
ENSEBUG00000012747	nop53	85	41.709	ENSLACG00000018320	NOP53	100	42.424	Latimeria_chalumnae
ENSEBUG00000012747	nop53	90	45.694	ENSLOCG00000014178	nop53	99	44.541	Lepisosteus_oculatus
ENSEBUG00000012747	nop53	91	43.519	ENSMFAG00000045103	NOP53	97	42.612	Macaca_fascicularis
ENSEBUG00000012747	nop53	91	44.111	ENSMMUG00000013348	NOP53	97	70.000	Macaca_mulatta
ENSEBUG00000012747	nop53	91	43.880	ENSMNEG00000042540	NOP53	93	42.735	Macaca_nemestrina
ENSEBUG00000012747	nop53	90	38.657	ENSMLEG00000032475	NOP53	95	38.681	Mandrillus_leucophaeus
ENSEBUG00000012747	nop53	90	42.593	ENSMAMG00000012652	nop53	94	42.411	Mastacembelus_armatus
ENSEBUG00000012747	nop53	90	42.787	ENSMZEG00005005033	nop53	93	43.529	Maylandia_zebra
ENSEBUG00000012747	nop53	91	41.801	ENSMAUG00000012617	Nop53	95	41.667	Mesocricetus_auratus
ENSEBUG00000012747	nop53	91	44.394	ENSMICG00000005580	NOP53	97	43.919	Microcebus_murinus
ENSEBUG00000012747	nop53	90	43.387	ENSMOCG00000008367	Nop53	95	43.016	Microtus_ochrogaster
ENSEBUG00000012747	nop53	90	42.243	ENSMMOG00000006515	nop53	93	42.494	Mola_mola
ENSEBUG00000012747	nop53	91	43.885	ENSMODG00000008721	NOP53	86	43.721	Monodelphis_domestica
ENSEBUG00000012747	nop53	90	41.176	ENSMALG00000020350	nop53	89	42.857	Monopterus_albus
ENSEBUG00000012747	nop53	91	44.292	MGP_CAROLIEiJ_G0029218	Nop53	95	42.516	Mus_caroli
ENSEBUG00000012747	nop53	91	44.292	ENSMUSG00000041560	Nop53	95	42.516	Mus_musculus
ENSEBUG00000012747	nop53	85	44.175	MGP_PahariEiJ_G0021074	-	96	42.961	Mus_pahari
ENSEBUG00000012747	nop53	91	43.836	MGP_SPRETEiJ_G0030298	Nop53	95	42.082	Mus_spretus
ENSEBUG00000012747	nop53	91	44.444	ENSMPUG00000004456	NOP53	93	43.709	Mustela_putorius_furo
ENSEBUG00000012747	nop53	57	56.818	ENSMLUG00000027066	-	100	47.619	Myotis_lucifugus
ENSEBUG00000012747	nop53	98	42.333	ENSNGAG00000019894	Nop53	97	41.525	Nannospalax_galili
ENSEBUG00000012747	nop53	88	38.904	ENSNBRG00000002057	nop53	86	41.912	Neolamprologus_brichardi
ENSEBUG00000012747	nop53	93	32.706	ENSNLEG00000028326	-	99	34.426	Nomascus_leucogenys
ENSEBUG00000012747	nop53	91	43.418	ENSNLEG00000003143	NOP53	93	43.722	Nomascus_leucogenys
ENSEBUG00000012747	nop53	78	37.047	ENSMEUG00000002525	-	96	37.069	Notamacropus_eugenii
ENSEBUG00000012747	nop53	90	42.857	ENSODEG00000006707	NOP53	95	41.575	Octodon_degus
ENSEBUG00000012747	nop53	90	42.130	ENSONIG00000016624	nop53	93	43.891	Oreochromis_niloticus
ENSEBUG00000012747	nop53	90	40.049	ENSORLG00000008659	nop53	93	41.355	Oryzias_latipes
ENSEBUG00000012747	nop53	90	38.480	ENSORLG00020019916	nop53	90	40.094	Oryzias_latipes_hni
ENSEBUG00000012747	nop53	90	40.845	ENSORLG00015001315	nop53	93	41.055	Oryzias_latipes_hsok
ENSEBUG00000012747	nop53	90	41.763	ENSOMEG00000018244	nop53	93	43.409	Oryzias_melastigma
ENSEBUG00000012747	nop53	90	74.242	ENSOGAG00000024300	NOP53	96	38.132	Otolemur_garnettii
ENSEBUG00000012747	nop53	87	33.255	ENSOARG00000011414	NOP53	95	31.828	Ovis_aries
ENSEBUG00000012747	nop53	91	42.202	ENSPPAG00000002927	-	97	41.880	Pan_paniscus
ENSEBUG00000012747	nop53	93	40.371	ENSPPAG00000029337	-	93	39.815	Pan_paniscus
ENSEBUG00000012747	nop53	90	39.623	ENSPPAG00000032995	-	94	38.106	Pan_paniscus
ENSEBUG00000012747	nop53	91	43.409	ENSPPRG00000008954	NOP53	95	42.424	Panthera_pardus
ENSEBUG00000012747	nop53	91	43.119	ENSPTRG00000011215	NOP53	97	42.521	Pan_troglodytes
ENSEBUG00000012747	nop53	93	40.371	ENSPTRG00000052493	-	93	39.815	Pan_troglodytes
ENSEBUG00000012747	nop53	90	41.190	ENSPTRG00000043520	-	95	41.138	Pan_troglodytes
ENSEBUG00000012747	nop53	91	43.578	ENSPANG00000002964	NOP53	97	42.612	Papio_anubis
ENSEBUG00000012747	nop53	93	41.855	ENSPKIG00000000127	nop53	93	43.213	Paramormyrops_kingsleyae
ENSEBUG00000012747	nop53	90	41.546	ENSPMGG00000021579	nop53	94	42.361	Periophthalmus_magnuspinnatus
ENSEBUG00000012747	nop53	91	44.725	ENSPEMG00000006856	Nop53	95	43.573	Peromyscus_maniculatus_bairdii
ENSEBUG00000012747	nop53	54	40.586	ENSPMAG00000001501	-	100	40.441	Petromyzon_marinus
ENSEBUG00000012747	nop53	91	41.549	ENSPCIG00000016718	NOP53	93	41.204	Phascolarctos_cinereus
ENSEBUG00000012747	nop53	90	42.791	ENSPFOG00000002839	nop53	93	43.468	Poecilia_formosa
ENSEBUG00000012747	nop53	90	42.791	ENSPLAG00000006675	nop53	93	43.468	Poecilia_latipinna
ENSEBUG00000012747	nop53	55	40.726	ENSPLAG00000009285	-	79	41.762	Poecilia_latipinna
ENSEBUG00000012747	nop53	55	40.726	ENSPMEG00000006978	nop53	79	41.762	Poecilia_mexicana
ENSEBUG00000012747	nop53	90	41.149	ENSPMEG00000009589	nop53	93	43.213	Poecilia_mexicana
ENSEBUG00000012747	nop53	90	40.723	ENSPREG00000008711	nop53	93	42.130	Poecilia_reticulata
ENSEBUG00000012747	nop53	91	41.284	ENSPPYG00000010181	NOP53	99	40.167	Pongo_abelii
ENSEBUG00000012747	nop53	91	43.750	ENSPCAG00000007692	NOP53	97	41.978	Procavia_capensis
ENSEBUG00000012747	nop53	74	60.345	ENSPCOG00000016124	NOP53	94	38.889	Propithecus_coquereli
ENSEBUG00000012747	nop53	54	47.860	ENSPVAG00000014671	NOP53	53	46.899	Pteropus_vampyrus
ENSEBUG00000012747	nop53	90	43.026	ENSPNYG00000001341	nop53	93	44.191	Pundamilia_nyererei
ENSEBUG00000012747	nop53	89	46.635	ENSPNAG00000012520	nop53	93	46.065	Pygocentrus_nattereri
ENSEBUG00000012747	nop53	91	43.578	ENSRNOG00000013023	Nop53	95	42.048	Rattus_norvegicus
ENSEBUG00000012747	nop53	91	43.578	ENSRBIG00000036427	NOP53	97	42.521	Rhinopithecus_bieti
ENSEBUG00000012747	nop53	91	43.578	ENSRROG00000042298	NOP53	97	42.521	Rhinopithecus_roxellana
ENSEBUG00000012747	nop53	91	44.828	ENSSBOG00000033115	NOP53	93	44.098	Saimiri_boliviensis_boliviensis
ENSEBUG00000012747	nop53	85	43.223	ENSSHAG00000002239	NOP53	100	41.294	Sarcophilus_harrisii
ENSEBUG00000012747	nop53	90	41.905	ENSSFOG00015007062	gltscr2	93	42.396	Scleropages_formosus
ENSEBUG00000012747	nop53	90	41.608	ENSSMAG00000000212	nop53	94	40.639	Scophthalmus_maximus
ENSEBUG00000012747	nop53	90	42.523	ENSSDUG00000010575	nop53	93	42.694	Seriola_dumerili
ENSEBUG00000012747	nop53	90	43.659	ENSSLDG00000000140	nop53	91	44.601	Seriola_lalandi_dorsalis
ENSEBUG00000012747	nop53	74	44.412	ENSSARG00000014109	NOP53	72	45.294	Sorex_araneus
ENSEBUG00000012747	nop53	90	36.124	ENSSPUG00000004420	NOP53	96	37.444	Sphenodon_punctatus
ENSEBUG00000012747	nop53	90	40.000	ENSSPAG00000000318	nop53	93	41.497	Stegastes_partitus
ENSEBUG00000012747	nop53	90	44.213	ENSSSCG00000022774	NOP53	93	43.596	Sus_scrofa
ENSEBUG00000012747	nop53	90	42.290	ENSTRUG00000004944	nop53	95	41.834	Takifugu_rubripes
ENSEBUG00000012747	nop53	70	55.200	ENSTBEG00000008708	NOP53	72	56.198	Tupaia_belangeri
ENSEBUG00000012747	nop53	91	44.191	ENSTTRG00000011831	NOP53	95	42.208	Tursiops_truncatus
ENSEBUG00000012747	nop53	90	41.781	ENSUAMG00000028254	NOP53	95	40.870	Ursus_americanus
ENSEBUG00000012747	nop53	76	39.528	ENSVVUG00000023365	NOP53	70	39.429	Vulpes_vulpes
ENSEBUG00000012747	nop53	86	53.390	ENSXETG00000002782	nop53	98	44.719	Xenopus_tropicalis
ENSEBUG00000012747	nop53	90	44.208	ENSXCOG00000004436	nop53	93	44.931	Xiphophorus_couchianus
ENSEBUG00000012747	nop53	90	42.593	ENSXMAG00000002589	nop53	93	43.991	Xiphophorus_maculatus