EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:86645
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 36749 bases
Position: chrFYBX02009504.1:2606349-2643097
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020663	PolyA_pol	PF01743.20	2.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021239	-	2871	-	ENSEBUP00000020663	422 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012779	-	95	62.283	ENSG00000072756	TRNT1	93	62.283	Homo_sapiens
ENSEBUG00000012779	-	99	59.765	ENSAPOG00000013687	trnt1	99	59.765	Acanthochromis_polyacanthus
ENSEBUG00000012779	-	95	61.235	ENSAMEG00000014520	TRNT1	93	61.235	Ailuropoda_melanoleuca
ENSEBUG00000012779	-	99	60.839	ENSACIG00000021706	trnt1	99	60.839	Amphilophus_citrinellus
ENSEBUG00000012779	-	99	60.941	ENSAOCG00000024612	trnt1	99	60.941	Amphiprion_ocellaris
ENSEBUG00000012779	-	96	56.204	ENSAPEG00000022627	trnt1	95	56.204	Amphiprion_percula
ENSEBUG00000012779	-	95	63.433	ENSATEG00000008928	trnt1	99	63.433	Anabas_testudineus
ENSEBUG00000012779	-	92	64.615	ENSAPLG00000004258	TRNT1	97	64.615	Anas_platyrhynchos
ENSEBUG00000012779	-	95	61.139	ENSACAG00000005657	TRNT1	92	61.139	Anolis_carolinensis
ENSEBUG00000012779	-	95	62.035	ENSANAG00000024802	TRNT1	93	62.035	Aotus_nancymaae
ENSEBUG00000012779	-	99	60.606	ENSACLG00000022227	trnt1	99	60.606	Astatotilapia_calliptera
ENSEBUG00000012779	-	95	62.963	ENSAMXG00000003960	trnt1	94	62.963	Astyanax_mexicanus
ENSEBUG00000012779	-	95	61.538	ENSBTAG00000019534	TRNT1	93	61.538	Bos_taurus
ENSEBUG00000012779	-	95	43.447	WBGene00010089	hpo-31	94	43.447	Caenorhabditis_elegans
ENSEBUG00000012779	-	95	62.035	ENSCJAG00000015466	TRNT1	93	62.035	Callithrix_jacchus
ENSEBUG00000012779	-	95	62.283	ENSCAFG00000005985	TRNT1	92	62.283	Canis_familiaris
ENSEBUG00000012779	-	95	62.283	ENSCAFG00020014746	TRNT1	92	62.283	Canis_lupus_dingo
ENSEBUG00000012779	-	95	62.283	ENSCHIG00000007030	TRNT1	92	62.283	Capra_hircus
ENSEBUG00000012779	-	95	61.538	ENSTSYG00000013390	TRNT1	93	61.538	Carlito_syrichta
ENSEBUG00000012779	-	89	49.468	ENSCAPG00000006891	TRNT1	99	49.468	Cavia_aperea
ENSEBUG00000012779	-	95	61.787	ENSCPOG00000007849	TRNT1	93	61.787	Cavia_porcellus
ENSEBUG00000012779	-	93	63.291	ENSCCAG00000002919	TRNT1	96	64.062	Cebus_capucinus
ENSEBUG00000012779	-	95	62.469	ENSCATG00000031985	TRNT1	92	62.469	Cercocebus_atys
ENSEBUG00000012779	-	95	62.035	ENSCLAG00000005186	TRNT1	93	62.035	Chinchilla_lanigera
ENSEBUG00000012779	-	95	62.779	ENSCSAG00000011052	TRNT1	93	62.779	Chlorocebus_sabaeus
ENSEBUG00000012779	-	79	71.676	ENSCHOG00000005712	TRNT1	77	71.676	Choloepus_hoffmanni
ENSEBUG00000012779	-	99	62.529	ENSCPBG00000017636	TRNT1	99	62.529	Chrysemys_picta_bellii
ENSEBUG00000012779	-	94	44.140	ENSCING00000007069	-	99	44.140	Ciona_intestinalis
ENSEBUG00000012779	-	95	43.672	ENSCSAVG00000007494	-	95	43.672	Ciona_savignyi
ENSEBUG00000012779	-	95	62.779	ENSCANG00000039030	TRNT1	93	62.779	Colobus_angolensis_palliatus
ENSEBUG00000012779	-	95	61.787	ENSCGRG00001009998	Trnt1	93	61.787	Cricetulus_griseus_chok1gshd
ENSEBUG00000012779	-	95	61.787	ENSCGRG00000013410	Trnt1	93	61.787	Cricetulus_griseus_crigri
ENSEBUG00000012779	-	99	61.085	ENSCSEG00000008157	trnt1	99	61.085	Cynoglossus_semilaevis
ENSEBUG00000012779	-	99	61.229	ENSCVAG00000019770	trnt1	99	61.229	Cyprinodon_variegatus
ENSEBUG00000012779	-	95	63.951	ENSDARG00000075297	trnt1	94	63.951	Danio_rerio
ENSEBUG00000012779	-	95	62.531	ENSDNOG00000008837	TRNT1	93	62.531	Dasypus_novemcinctus
ENSEBUG00000012779	-	99	61.229	ENSDORG00000014035	Trnt1	96	61.229	Dipodomys_ordii
ENSEBUG00000012779	-	96	45.721	FBgn0037369	CG2100	85	45.721	Drosophila_melanogaster
ENSEBUG00000012779	-	57	67.364	ENSETEG00000018177	TRNT1	96	67.364	Echinops_telfairi
ENSEBUG00000012779	-	95	63.027	ENSEASG00005003577	TRNT1	93	63.027	Equus_asinus_asinus
ENSEBUG00000012779	-	95	63.275	ENSECAG00000014420	TRNT1	93	63.275	Equus_caballus
ENSEBUG00000012779	-	95	61.787	ENSEEUG00000009567	TRNT1	93	61.787	Erinaceus_europaeus
ENSEBUG00000012779	-	95	62.469	ENSELUG00000003802	trnt1	94	62.469	Esox_lucius
ENSEBUG00000012779	-	95	62.035	ENSFCAG00000026805	TRNT1	92	62.035	Felis_catus
ENSEBUG00000012779	-	89	64.286	ENSFALG00000013539	TRNT1	98	64.286	Ficedula_albicollis
ENSEBUG00000012779	-	95	62.035	ENSFDAG00000018412	TRNT1	93	62.035	Fukomys_damarensis
ENSEBUG00000012779	-	99	61.412	ENSFHEG00000019294	trnt1	99	61.412	Fundulus_heteroclitus
ENSEBUG00000012779	-	95	61.042	ENSGMOG00000007460	trnt1	95	61.042	Gadus_morhua
ENSEBUG00000012779	-	94	64.160	ENSGALG00000017368	TRNT1	93	64.160	Gallus_gallus
ENSEBUG00000012779	-	99	61.939	ENSGAFG00000008647	trnt1	99	61.939	Gambusia_affinis
ENSEBUG00000012779	-	99	59.529	ENSGACG00000011903	trnt1	99	59.529	Gasterosteus_aculeatus
ENSEBUG00000012779	-	99	64.916	ENSGAGG00000020942	TRNT1	95	64.916	Gopherus_agassizii
ENSEBUG00000012779	-	95	62.283	ENSGGOG00000015286	TRNT1	93	62.283	Gorilla_gorilla
ENSEBUG00000012779	-	99	60.606	ENSHBUG00000002797	trnt1	99	60.606	Haplochromis_burtoni
ENSEBUG00000012779	-	94	58.750	ENSHGLG00000000221	-	92	58.750	Heterocephalus_glaber_female
ENSEBUG00000012779	-	95	61.538	ENSHGLG00000003649	TRNT1	93	61.538	Heterocephalus_glaber_female
ENSEBUG00000012779	-	95	60.546	ENSHGLG00100016421	TRNT1	93	60.546	Heterocephalus_glaber_male
ENSEBUG00000012779	-	99	60.000	ENSHCOG00000010618	trnt1	99	60.000	Hippocampus_comes
ENSEBUG00000012779	-	95	64.444	ENSIPUG00000000971	trnt1	94	64.444	Ictalurus_punctatus
ENSEBUG00000012779	-	95	63.184	ENSSTOG00000000150	TRNT1	90	66.321	Ictidomys_tridecemlineatus
ENSEBUG00000012779	-	95	62.283	ENSJJAG00000018561	Trnt1	93	62.283	Jaculus_jaculus
ENSEBUG00000012779	-	99	61.557	ENSKMAG00000011307	trnt1	99	61.557	Kryptolebias_marmoratus
ENSEBUG00000012779	-	96	56.867	ENSLBEG00000019457	trnt1	97	56.867	Labrus_bergylta
ENSEBUG00000012779	-	95	63.704	ENSLACG00000013227	TRNT1	93	63.704	Latimeria_chalumnae
ENSEBUG00000012779	-	100	60.648	ENSLOCG00000011105	trnt1	98	60.648	Lepisosteus_oculatus
ENSEBUG00000012779	-	95	62.035	ENSLAFG00000023191	TRNT1	93	62.035	Loxodonta_africana
ENSEBUG00000012779	-	95	62.716	ENSMFAG00000045113	TRNT1	92	62.716	Macaca_fascicularis
ENSEBUG00000012779	-	95	62.716	ENSMMUG00000017983	TRNT1	92	62.716	Macaca_mulatta
ENSEBUG00000012779	-	95	62.716	ENSMNEG00000037805	TRNT1	92	62.716	Macaca_nemestrina
ENSEBUG00000012779	-	90	64.042	ENSMLEG00000033671	TRNT1	99	64.042	Mandrillus_leucophaeus
ENSEBUG00000012779	-	95	62.779	ENSMAMG00000023401	trnt1	94	62.779	Mastacembelus_armatus
ENSEBUG00000012779	-	99	60.606	ENSMZEG00005009141	trnt1	99	60.606	Maylandia_zebra
ENSEBUG00000012779	-	73	63.344	ENSMGAG00000009971	TRNT1	97	63.344	Meleagris_gallopavo
ENSEBUG00000012779	-	95	61.290	ENSMAUG00000020707	Trnt1	93	61.290	Mesocricetus_auratus
ENSEBUG00000012779	-	95	63.275	ENSMICG00000016615	TRNT1	93	63.275	Microcebus_murinus
ENSEBUG00000012779	-	95	61.290	ENSMOCG00000004539	Trnt1	93	61.290	Microtus_ochrogaster
ENSEBUG00000012779	-	99	60.757	ENSMMOG00000010742	trnt1	99	60.757	Mola_mola
ENSEBUG00000012779	-	95	63.457	ENSMODG00000004368	TRNT1	93	63.457	Monodelphis_domestica
ENSEBUG00000012779	-	99	59.765	ENSMALG00000008376	trnt1	99	59.765	Monopterus_albus
ENSEBUG00000012779	-	95	62.035	MGP_CAROLIEiJ_G0028698	Trnt1	88	67.917	Mus_caroli
ENSEBUG00000012779	-	95	62.035	ENSMUSG00000013736	Trnt1	85	70.109	Mus_musculus
ENSEBUG00000012779	-	95	62.531	MGP_PahariEiJ_G0022449	Trnt1	86	72.571	Mus_pahari
ENSEBUG00000012779	-	95	61.787	MGP_SPRETEiJ_G0029726	Trnt1	85	70.109	Mus_spretus
ENSEBUG00000012779	-	95	61.787	ENSMPUG00000017017	TRNT1	92	61.787	Mustela_putorius_furo
ENSEBUG00000012779	-	91	63.636	ENSMLUG00000011864	TRNT1	99	63.636	Myotis_lucifugus
ENSEBUG00000012779	-	95	61.290	ENSNGAG00000000537	Trnt1	93	61.290	Nannospalax_galili
ENSEBUG00000012779	-	80	61.207	ENSNBRG00000023606	trnt1	99	61.207	Neolamprologus_brichardi
ENSEBUG00000012779	-	95	62.779	ENSNLEG00000003226	TRNT1	93	62.779	Nomascus_leucogenys
ENSEBUG00000012779	-	95	62.469	ENSMEUG00000004684	TRNT1	93	62.469	Notamacropus_eugenii
ENSEBUG00000012779	-	90	60.367	ENSOPRG00000015067	TRNT1	99	60.367	Ochotona_princeps
ENSEBUG00000012779	-	95	62.779	ENSODEG00000007597	TRNT1	93	62.779	Octodon_degus
ENSEBUG00000012779	-	99	61.538	ENSONIG00000020273	trnt1	98	61.538	Oreochromis_niloticus
ENSEBUG00000012779	-	94	62.250	ENSOANG00000007514	TRNT1	92	62.250	Ornithorhynchus_anatinus
ENSEBUG00000012779	-	95	61.538	ENSOCUG00000008580	TRNT1	94	61.538	Oryctolagus_cuniculus
ENSEBUG00000012779	-	99	60.900	ENSORLG00000003165	trnt1	99	60.900	Oryzias_latipes
ENSEBUG00000012779	-	99	61.611	ENSORLG00020022060	trnt1	99	61.611	Oryzias_latipes_hni
ENSEBUG00000012779	-	99	61.611	ENSORLG00015018915	trnt1	99	61.611	Oryzias_latipes_hsok
ENSEBUG00000012779	-	99	60.190	ENSOMEG00000003331	trnt1	99	60.190	Oryzias_melastigma
ENSEBUG00000012779	-	95	62.283	ENSOARG00000008631	TRNT1	92	62.283	Ovis_aries
ENSEBUG00000012779	-	95	62.531	ENSPPAG00000043566	TRNT1	93	62.531	Pan_paniscus
ENSEBUG00000012779	-	95	62.283	ENSPPRG00000001327	TRNT1	92	62.283	Panthera_pardus
ENSEBUG00000012779	-	95	62.283	ENSPTIG00000011448	TRNT1	92	62.283	Panthera_tigris_altaica
ENSEBUG00000012779	-	95	62.283	ENSPTRG00000014564	TRNT1	93	62.283	Pan_troglodytes
ENSEBUG00000012779	-	95	62.469	ENSPANG00000025944	TRNT1	92	62.469	Papio_anubis
ENSEBUG00000012779	-	100	60.930	ENSPKIG00000020015	trnt1	99	60.930	Paramormyrops_kingsleyae
ENSEBUG00000012779	-	93	65.909	ENSPSIG00000017356	TRNT1	99	66.760	Pelodiscus_sinensis
ENSEBUG00000012779	-	99	60.471	ENSPMGG00000008888	trnt1	98	60.471	Periophthalmus_magnuspinnatus
ENSEBUG00000012779	-	95	61.787	ENSPEMG00000019845	Trnt1	93	61.787	Peromyscus_maniculatus_bairdii
ENSEBUG00000012779	-	94	64.250	ENSPCIG00000030436	TRNT1	92	64.250	Phascolarctos_cinereus
ENSEBUG00000012779	-	95	64.516	ENSPFOG00000006194	trnt1	94	64.516	Poecilia_formosa
ENSEBUG00000012779	-	95	64.677	ENSPLAG00000015623	trnt1	99	64.677	Poecilia_latipinna
ENSEBUG00000012779	-	99	62.648	ENSPMEG00000012216	trnt1	99	64.677	Poecilia_mexicana
ENSEBUG00000012779	-	99	62.411	ENSPREG00000021470	trnt1	99	62.411	Poecilia_reticulata
ENSEBUG00000012779	-	95	62.035	ENSPPYG00000013702	TRNT1	93	62.035	Pongo_abelii
ENSEBUG00000012779	-	90	64.491	ENSPCAG00000001951	TRNT1	100	64.491	Procavia_capensis
ENSEBUG00000012779	-	95	63.027	ENSPCOG00000022228	TRNT1	93	63.027	Propithecus_coquereli
ENSEBUG00000012779	-	90	63.255	ENSPVAG00000008784	TRNT1	99	63.255	Pteropus_vampyrus
ENSEBUG00000012779	-	99	60.140	ENSPNYG00000003120	trnt1	99	60.140	Pundamilia_nyererei
ENSEBUG00000012779	-	95	63.210	ENSPNAG00000000565	trnt1	94	63.210	Pygocentrus_nattereri
ENSEBUG00000012779	-	95	61.042	ENSRNOG00000006432	Trnt1	93	61.042	Rattus_norvegicus
ENSEBUG00000012779	-	95	62.283	ENSRBIG00000042632	TRNT1	93	62.283	Rhinopithecus_bieti
ENSEBUG00000012779	-	95	62.283	ENSRROG00000036866	TRNT1	93	62.283	Rhinopithecus_roxellana
ENSEBUG00000012779	-	95	62.283	ENSSBOG00000021208	TRNT1	93	62.283	Saimiri_boliviensis_boliviensis
ENSEBUG00000012779	-	95	62.716	ENSSHAG00000018861	TRNT1	93	62.716	Sarcophilus_harrisii
ENSEBUG00000012779	-	96	64.216	ENSSFOG00015020844	trnt1	94	64.216	Scleropages_formosus
ENSEBUG00000012779	-	99	60.235	ENSSMAG00000015432	trnt1	97	60.235	Scophthalmus_maximus
ENSEBUG00000012779	-	99	60.373	ENSSDUG00000012320	trnt1	99	60.373	Seriola_dumerili
ENSEBUG00000012779	-	56	60.759	ENSSLDG00000016463	-	90	60.759	Seriola_lalandi_dorsalis
ENSEBUG00000012779	-	99	60.373	ENSSLDG00000009325	trnt1	99	60.373	Seriola_lalandi_dorsalis
ENSEBUG00000012779	-	90	64.752	ENSSPUG00000014153	TRNT1	99	64.752	Sphenodon_punctatus
ENSEBUG00000012779	-	99	59.859	ENSSPAG00000021005	trnt1	99	59.859	Stegastes_partitus
ENSEBUG00000012779	-	95	62.531	ENSSSCG00000011529	TRNT1	93	62.531	Sus_scrofa
ENSEBUG00000012779	-	94	63.659	ENSTGUG00000010192	TRNT1	99	63.659	Taeniopygia_guttata
ENSEBUG00000012779	-	99	62.441	ENSTRUG00000001088	trnt1	99	62.441	Takifugu_rubripes
ENSEBUG00000012779	-	99	61.033	ENSTNIG00000007363	trnt1	98	61.033	Tetraodon_nigroviridis
ENSEBUG00000012779	-	57	54.393	ENSTBEG00000006367	TRNT1	79	54.393	Tupaia_belangeri
ENSEBUG00000012779	-	95	62.531	ENSTTRG00000007803	TRNT1	93	62.531	Tursiops_truncatus
ENSEBUG00000012779	-	95	61.787	ENSUAMG00000022574	TRNT1	92	61.787	Ursus_americanus
ENSEBUG00000012779	-	95	61.787	ENSUMAG00000024092	TRNT1	92	61.787	Ursus_maritimus
ENSEBUG00000012779	-	95	62.283	ENSVVUG00000012810	TRNT1	92	62.283	Vulpes_vulpes
ENSEBUG00000012779	-	96	59.854	ENSXETG00000025091	trnt1	99	60.448	Xenopus_tropicalis
ENSEBUG00000012779	-	99	61.702	ENSXCOG00000010150	trnt1	99	61.702	Xiphophorus_couchianus
ENSEBUG00000012779	-	99	61.466	ENSXMAG00000002227	trnt1	99	61.466	Xiphophorus_maculatus