EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012845 (Gene tree)
Gene ID: -
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 203431 bases
Position: chrFYBX02005816.1:5280665-5484095
Accession: ZDB-GENE-060503-297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020794	IPPT	PF01715.17	1.1e-63	1	1
ENSEBUP00000020777	IPPT	PF01715.17	1.2e-63	1	1
ENSEBUP00000020777	zf-C2H2_jaz	PF12171.8	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021353	-	6097	-	ENSEBUP00000020777	445 (aa)	-	-
ENSEBUT00000021369	-	1494	-	ENSEBUP00000020794	417 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012845	trit1	82	71.429	ENSG00000043514	TRIT1	88	71.429	Homo_sapiens
ENSEBUG00000012845	trit1	92	57.416	ENSAPOG00000020918	trit1	88	57.805	Acanthochromis_polyacanthus
ENSEBUG00000012845	trit1	98	52.727	ENSAMEG00000004342	TRIT1	93	53.167	Ailuropoda_melanoleuca
ENSEBUG00000012845	trit1	89	56.716	ENSACIG00000017409	trit1	86	57.073	Amphilophus_citrinellus
ENSEBUG00000012845	trit1	91	57.457	ENSAOCG00000009850	trit1	84	57.457	Amphiprion_ocellaris
ENSEBUG00000012845	trit1	91	57.213	ENSAPEG00000001481	trit1	84	57.213	Amphiprion_percula
ENSEBUG00000012845	trit1	93	54.545	ENSATEG00000005426	trit1	87	54.545	Anabas_testudineus
ENSEBUG00000012845	trit1	73	47.892	ENSAPLG00000011421	TRIT1	94	47.892	Anas_platyrhynchos
ENSEBUG00000012845	trit1	95	55.581	ENSACAG00000002280	TRIT1	86	55.581	Anolis_carolinensis
ENSEBUG00000012845	trit1	93	54.524	ENSANAG00000030732	TRIT1	83	71.429	Aotus_nancymaae
ENSEBUG00000012845	trit1	91	56.235	ENSACLG00000004920	trit1	85	56.235	Astatotilapia_calliptera
ENSEBUG00000012845	trit1	95	54.439	ENSAMXG00000010959	trit1	93	54.439	Astyanax_mexicanus
ENSEBUG00000012845	trit1	93	54.762	ENSBTAG00000013832	TRIT1	89	54.762	Bos_taurus
ENSEBUG00000012845	trit1	91	34.805	WBGene00001740	gro-1	95	34.300	Caenorhabditis_elegans
ENSEBUG00000012845	trit1	93	54.524	ENSCJAG00000002620	TRIT1	90	57.012	Callithrix_jacchus
ENSEBUG00000012845	trit1	98	52.154	ENSCAFG00000003048	TRIT1	93	52.154	Canis_familiaris
ENSEBUG00000012845	trit1	98	50.881	ENSCAFG00020003875	TRIT1	90	56.156	Canis_lupus_dingo
ENSEBUG00000012845	trit1	93	53.664	ENSCHIG00000013259	TRIT1	89	53.664	Capra_hircus
ENSEBUG00000012845	trit1	93	55.476	ENSTSYG00000004363	TRIT1	89	55.238	Carlito_syrichta
ENSEBUG00000012845	trit1	74	50.000	ENSCAPG00000017001	TRIT1	85	50.000	Cavia_aperea
ENSEBUG00000012845	trit1	94	54.137	ENSCPOG00000012820	TRIT1	89	54.137	Cavia_porcellus
ENSEBUG00000012845	trit1	93	54.524	ENSCCAG00000031271	TRIT1	90	57.812	Cebus_capucinus
ENSEBUG00000012845	trit1	98	47.534	ENSCATG00000034344	TRIT1	90	57.895	Cercocebus_atys
ENSEBUG00000012845	trit1	92	55.206	ENSCLAG00000009828	TRIT1	88	55.206	Chinchilla_lanigera
ENSEBUG00000012845	trit1	90	51.597	ENSCSAG00000001137	TRIT1	98	51.597	Chlorocebus_sabaeus
ENSEBUG00000012845	trit1	93	55.000	ENSCHOG00000000435	TRIT1	89	55.000	Choloepus_hoffmanni
ENSEBUG00000012845	trit1	93	42.290	ENSCSAVG00000002050	-	93	42.290	Ciona_savignyi
ENSEBUG00000012845	trit1	98	53.182	ENSCANG00000043008	TRIT1	90	57.895	Colobus_angolensis_palliatus
ENSEBUG00000012845	trit1	92	56.522	ENSCGRG00001001894	Trit1	88	56.522	Cricetulus_griseus_chok1gshd
ENSEBUG00000012845	trit1	84	55.937	ENSCGRG00000007059	Trit1	83	55.467	Cricetulus_griseus_crigri
ENSEBUG00000012845	trit1	88	55.808	ENSCSEG00000009574	trit1	92	54.091	Cynoglossus_semilaevis
ENSEBUG00000012845	trit1	91	54.279	ENSDARG00000032876	trit1	95	57.595	Danio_rerio
ENSEBUG00000012845	trit1	93	46.985	ENSDNOG00000001994	TRIT1	90	46.985	Dasypus_novemcinctus
ENSEBUG00000012845	trit1	95	47.897	ENSDORG00000012449	Trit1	93	47.897	Dipodomys_ordii
ENSEBUG00000012845	trit1	91	39.401	FBgn0043799	CG31381	90	39.401	Drosophila_melanogaster
ENSEBUG00000012845	trit1	89	54.878	ENSETEG00000008733	TRIT1	95	54.878	Echinops_telfairi
ENSEBUG00000012845	trit1	94	52.656	ENSECAG00000010597	TRIT1	79	71.429	Equus_caballus
ENSEBUG00000012845	trit1	80	53.509	ENSEEUG00000009269	TRIT1	71	53.509	Erinaceus_europaeus
ENSEBUG00000012845	trit1	91	52.228	ENSELUG00000017278	trit1	91	50.461	Esox_lucius
ENSEBUG00000012845	trit1	86	71.429	ENSFCAG00000006029	TRIT1	93	71.429	Felis_catus
ENSEBUG00000012845	trit1	84	57.632	ENSFALG00000000532	TRIT1	94	57.632	Ficedula_albicollis
ENSEBUG00000012845	trit1	92	52.941	ENSFDAG00000003098	TRIT1	93	52.941	Fukomys_damarensis
ENSEBUG00000012845	trit1	75	52.997	ENSFHEG00000022274	trit1	94	52.997	Fundulus_heteroclitus
ENSEBUG00000012845	trit1	91	55.904	ENSGMOG00000006522	trit1	96	55.904	Gadus_morhua
ENSEBUG00000012845	trit1	91	57.073	ENSGALG00000003851	TRIT1	89	57.073	Gallus_gallus
ENSEBUG00000012845	trit1	76	59.385	ENSGAFG00000018636	trit1	100	50.538	Gambusia_affinis
ENSEBUG00000012845	trit1	90	56.553	ENSGACG00000008493	trit1	94	56.553	Gasterosteus_aculeatus
ENSEBUG00000012845	trit1	83	56.684	ENSGAGG00000000522	TRIT1	96	54.569	Gopherus_agassizii
ENSEBUG00000012845	trit1	82	71.429	ENSGGOG00000010070	TRIT1	84	77.273	Gorilla_gorilla
ENSEBUG00000012845	trit1	91	55.746	ENSHBUG00000018999	trit1	85	55.746	Haplochromis_burtoni
ENSEBUG00000012845	trit1	93	48.210	ENSHGLG00000009564	-	89	48.210	Heterocephalus_glaber_female
ENSEBUG00000012845	trit1	92	55.690	ENSHGLG00000010308	-	88	55.690	Heterocephalus_glaber_female
ENSEBUG00000012845	trit1	84	39.842	ENSHGLG00100018159	-	96	39.842	Heterocephalus_glaber_male
ENSEBUG00000012845	trit1	92	55.690	ENSHGLG00100015382	-	89	55.690	Heterocephalus_glaber_male
ENSEBUG00000012845	trit1	89	54.458	ENSHCOG00000006755	trit1	81	54.458	Hippocampus_comes
ENSEBUG00000012845	trit1	91	55.340	ENSIPUG00000021822	trit1	84	55.340	Ictalurus_punctatus
ENSEBUG00000012845	trit1	93	55.714	ENSSTOG00000006446	TRIT1	86	55.714	Ictidomys_tridecemlineatus
ENSEBUG00000012845	trit1	94	49.533	ENSJJAG00000000300	-	89	49.533	Jaculus_jaculus
ENSEBUG00000012845	trit1	94	51.544	ENSJJAG00000000316	-	93	51.544	Jaculus_jaculus
ENSEBUG00000012845	trit1	93	56.770	ENSKMAG00000021788	trit1	88	56.770	Kryptolebias_marmoratus
ENSEBUG00000012845	trit1	91	56.341	ENSLBEG00000024262	trit1	85	56.341	Labrus_bergylta
ENSEBUG00000012845	trit1	93	54.846	ENSLACG00000013861	TRIT1	87	54.846	Latimeria_chalumnae
ENSEBUG00000012845	trit1	91	55.635	ENSLOCG00000002057	trit1	87	55.635	Lepisosteus_oculatus
ENSEBUG00000012845	trit1	92	55.314	ENSLAFG00000016876	TRIT1	88	55.314	Loxodonta_africana
ENSEBUG00000012845	trit1	98	53.273	ENSMFAG00000001316	TRIT1	90	57.895	Macaca_fascicularis
ENSEBUG00000012845	trit1	98	53.273	ENSMMUG00000016220	TRIT1	90	57.895	Macaca_mulatta
ENSEBUG00000012845	trit1	98	53.273	ENSMNEG00000023137	TRIT1	90	57.895	Macaca_nemestrina
ENSEBUG00000012845	trit1	98	53.047	ENSMLEG00000035296	TRIT1	90	57.895	Mandrillus_leucophaeus
ENSEBUG00000012845	trit1	87	56.234	ENSMAMG00000005868	trit1	94	53.406	Mastacembelus_armatus
ENSEBUG00000012845	trit1	91	56.479	ENSMZEG00005011506	trit1	85	56.479	Maylandia_zebra
ENSEBUG00000012845	trit1	83	56.117	ENSMGAG00000005516	TRIT1	99	56.117	Meleagris_gallopavo
ENSEBUG00000012845	trit1	91	57.073	ENSMAUG00000000399	Trit1	87	57.073	Mesocricetus_auratus
ENSEBUG00000012845	trit1	94	55.425	ENSMICG00000016294	TRIT1	91	66.667	Microcebus_murinus
ENSEBUG00000012845	trit1	93	56.190	ENSMOCG00000008173	Trit1	89	56.190	Microtus_ochrogaster
ENSEBUG00000012845	trit1	93	51.190	ENSMMOG00000021140	trit1	94	51.442	Mola_mola
ENSEBUG00000012845	trit1	92	54.762	ENSMODG00000017650	TRIT1	91	54.762	Monodelphis_domestica
ENSEBUG00000012845	trit1	91	56.068	ENSMALG00000017843	trit1	86	56.068	Monopterus_albus
ENSEBUG00000012845	trit1	92	57.488	MGP_CAROLIEiJ_G0026428	Trit1	88	57.488	Mus_caroli
ENSEBUG00000012845	trit1	92	57.246	ENSMUSG00000028653	Trit1	88	57.246	Mus_musculus
ENSEBUG00000012845	trit1	92	57.246	MGP_PahariEiJ_G0028758	Trit1	88	57.246	Mus_pahari
ENSEBUG00000012845	trit1	92	57.005	MGP_SPRETEiJ_G0027408	Trit1	88	57.005	Mus_spretus
ENSEBUG00000012845	trit1	98	53.061	ENSMPUG00000014291	TRIT1	93	53.061	Mustela_putorius_furo
ENSEBUG00000012845	trit1	93	54.893	ENSMLUG00000000334	TRIT1	88	54.893	Myotis_lucifugus
ENSEBUG00000012845	trit1	94	54.588	ENSNLEG00000012038	TRIT1	90	57.895	Nomascus_leucogenys
ENSEBUG00000012845	trit1	92	49.758	ENSMEUG00000005217	TRIT1	88	49.758	Notamacropus_eugenii
ENSEBUG00000012845	trit1	64	49.701	ENSOPRG00000003205	-	60	49.701	Ochotona_princeps
ENSEBUG00000012845	trit1	92	53.571	ENSODEG00000006117	TRIT1	88	53.571	Octodon_degus
ENSEBUG00000012845	trit1	91	55.314	ENSONIG00000015407	trit1	86	55.314	Oreochromis_niloticus
ENSEBUG00000012845	trit1	83	54.255	ENSOANG00000002779	TRIT1	98	53.213	Ornithorhynchus_anatinus
ENSEBUG00000012845	trit1	92	57.005	ENSOCUG00000002054	TRIT1	88	57.005	Oryctolagus_cuniculus
ENSEBUG00000012845	trit1	92	56.835	ENSORLG00000005802	trit1	90	56.835	Oryzias_latipes
ENSEBUG00000012845	trit1	92	56.835	ENSORLG00020005519	trit1	90	56.835	Oryzias_latipes_hni
ENSEBUG00000012845	trit1	92	56.595	ENSORLG00015018715	trit1	90	56.595	Oryzias_latipes_hsok
ENSEBUG00000012845	trit1	95	55.738	ENSOMEG00000006569	trit1	91	55.738	Oryzias_melastigma
ENSEBUG00000012845	trit1	94	54.481	ENSOGAG00000009571	TRIT1	90	54.481	Otolemur_garnettii
ENSEBUG00000012845	trit1	93	54.632	ENSOARG00000020140	TRIT1	89	54.632	Ovis_aries
ENSEBUG00000012845	trit1	93	55.107	ENSPPAG00000023930	TRIT1	87	67.857	Pan_paniscus
ENSEBUG00000012845	trit1	86	71.429	ENSPPRG00000009680	TRIT1	93	71.429	Panthera_pardus
ENSEBUG00000012845	trit1	86	71.429	ENSPTIG00000021134	TRIT1	93	71.429	Panthera_tigris_altaica
ENSEBUG00000012845	trit1	93	55.107	ENSPTRG00000000579	TRIT1	87	67.857	Pan_troglodytes
ENSEBUG00000012845	trit1	98	53.047	ENSPANG00000018125	TRIT1	90	57.585	Papio_anubis
ENSEBUG00000012845	trit1	87	53.061	ENSPKIG00000024527	trit1	98	53.061	Paramormyrops_kingsleyae
ENSEBUG00000012845	trit1	80	44.780	ENSPSIG00000017073	TRIT1	99	44.780	Pelodiscus_sinensis
ENSEBUG00000012845	trit1	84	55.643	ENSPMGG00000018445	trit1	92	55.643	Periophthalmus_magnuspinnatus
ENSEBUG00000012845	trit1	93	55.952	ENSPEMG00000022418	Trit1	89	55.952	Peromyscus_maniculatus_bairdii
ENSEBUG00000012845	trit1	84	52.880	ENSPMAG00000008892	trit1	96	52.880	Petromyzon_marinus
ENSEBUG00000012845	trit1	92	55.529	ENSPCIG00000020666	TRIT1	93	58.716	Phascolarctos_cinereus
ENSEBUG00000012845	trit1	92	56.325	ENSPFOG00000014626	trit1	88	56.325	Poecilia_formosa
ENSEBUG00000012845	trit1	76	58.154	ENSPLAG00000011669	trit1	94	58.154	Poecilia_latipinna
ENSEBUG00000012845	trit1	61	56.250	ENSPMEG00000023788	trit1	91	56.250	Poecilia_mexicana
ENSEBUG00000012845	trit1	75	58.307	ENSPREG00000018182	trit1	91	57.798	Poecilia_reticulata
ENSEBUG00000012845	trit1	98	53.273	ENSPPYG00000001499	TRIT1	94	53.273	Pongo_abelii
ENSEBUG00000012845	trit1	75	43.491	ENSPCAG00000014680	TRIT1	92	43.491	Procavia_capensis
ENSEBUG00000012845	trit1	82	71.429	ENSPCOG00000014150	TRIT1	87	71.429	Propithecus_coquereli
ENSEBUG00000012845	trit1	93	50.238	ENSPVAG00000003344	TRIT1	90	49.647	Pteropus_vampyrus
ENSEBUG00000012845	trit1	69	57.877	ENSPNYG00000001003	trit1	94	57.877	Pundamilia_nyererei
ENSEBUG00000012845	trit1	92	56.280	ENSPNAG00000009466	trit1	88	58.475	Pygocentrus_nattereri
ENSEBUG00000012845	trit1	98	51.656	ENSRNOG00000014274	Trit1	93	51.656	Rattus_norvegicus
ENSEBUG00000012845	trit1	94	54.588	ENSRBIG00000043179	TRIT1	90	57.895	Rhinopithecus_bieti
ENSEBUG00000012845	trit1	94	54.588	ENSRROG00000042670	TRIT1	90	57.895	Rhinopithecus_roxellana
ENSEBUG00000012845	trit1	92	33.025	YOR274W	-	94	33.025	Saccharomyces_cerevisiae
ENSEBUG00000012845	trit1	94	53.647	ENSSBOG00000024417	TRIT1	90	57.944	Saimiri_boliviensis_boliviensis
ENSEBUG00000012845	trit1	85	52.320	ENSSHAG00000018363	TRIT1	91	52.320	Sarcophilus_harrisii
ENSEBUG00000012845	trit1	92	54.106	ENSSFOG00015007284	trit1	81	54.106	Scleropages_formosus
ENSEBUG00000012845	trit1	91	57.039	ENSSMAG00000020730	trit1	86	57.039	Scophthalmus_maximus
ENSEBUG00000012845	trit1	92	56.595	ENSSDUG00000001683	trit1	86	56.595	Seriola_dumerili
ENSEBUG00000012845	trit1	89	56.079	ENSSLDG00000008379	trit1	86	56.355	Seriola_lalandi_dorsalis
ENSEBUG00000012845	trit1	96	53.620	ENSSARG00000004540	TRIT1	93	53.620	Sorex_araneus
ENSEBUG00000012845	trit1	85	53.385	ENSSPUG00000003472	TRIT1	78	53.385	Sphenodon_punctatus
ENSEBUG00000012845	trit1	88	56.642	ENSSPAG00000020745	trit1	88	56.642	Stegastes_partitus
ENSEBUG00000012845	trit1	83	53.158	ENSTGUG00000001242	TRIT1	99	53.158	Taeniopygia_guttata
ENSEBUG00000012845	trit1	91	55.122	ENSTRUG00000013936	trit1	90	54.146	Takifugu_rubripes
ENSEBUG00000012845	trit1	92	56.699	ENSTNIG00000009240	trit1	92	56.699	Tetraodon_nigroviridis
ENSEBUG00000012845	trit1	78	74.699	ENSTBEG00000001317	TRIT1	74	74.699	Tupaia_belangeri
ENSEBUG00000012845	trit1	94	54.481	ENSTTRG00000005064	TRIT1	91	53.846	Tursiops_truncatus
ENSEBUG00000012845	trit1	60	56.627	ENSUAMG00000000522	-	89	62.025	Ursus_americanus
ENSEBUG00000012845	trit1	93	55.213	ENSUMAG00000017299	TRIT1	80	55.213	Ursus_maritimus
ENSEBUG00000012845	trit1	93	51.190	ENSVPAG00000003008	TRIT1	88	51.190	Vicugna_pacos
ENSEBUG00000012845	trit1	93	55.529	ENSXETG00000010952	trit1	93	55.529	Xenopus_tropicalis
ENSEBUG00000012845	trit1	76	57.846	ENSXMAG00000016302	trit1	88	57.846	Xiphophorus_maculatus