EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000012869 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 245839 bases
Position: chrFYBX02009723.1:4520507-4766345
Accession: ZDB-GENE-040426-2854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020868	rRNA_proc-arch	PF13234.6	2.6e-77	1	1
ENSEBUP00000020819	rRNA_proc-arch	PF13234.6	2.6e-77	1	1
ENSEBUP00000020868	DEAD	PF00270.29	4.4e-18	1	1
ENSEBUP00000020819	DEAD	PF00270.29	4.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021395	-	5456	-	ENSEBUP00000020819	1030 (aa)	-	-
ENSEBUT00000021444	-	5399	-	ENSEBUP00000020868	1011 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000012869	mtrex	59	47.170	ENSEBUG00000013680	-	52	47.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012869	mtrex	99	73.614	ENSG00000039123	MTREX	99	74.206	Homo_sapiens
ENSEBUG00000012869	mtrex	99	72.754	ENSAPOG00000007814	mtrex	99	72.754	Acanthochromis_polyacanthus
ENSEBUG00000012869	mtrex	99	74.231	ENSAMEG00000013856	MTREX	99	74.231	Ailuropoda_melanoleuca
ENSEBUG00000012869	mtrex	92	77.092	ENSACIG00000015117	mtrex	96	77.092	Amphilophus_citrinellus
ENSEBUG00000012869	mtrex	99	72.754	ENSAOCG00000011884	mtrex	99	72.754	Amphiprion_ocellaris
ENSEBUG00000012869	mtrex	99	72.657	ENSAPEG00000019384	mtrex	99	72.657	Amphiprion_percula
ENSEBUG00000012869	mtrex	99	72.553	ENSATEG00000015117	mtrex	99	72.553	Anabas_testudineus
ENSEBUG00000012869	mtrex	97	75.800	ENSAPLG00000009694	MTREX	100	75.800	Anas_platyrhynchos
ENSEBUG00000012869	mtrex	99	74.831	ENSACAG00000015200	MTREX	96	74.831	Anolis_carolinensis
ENSEBUG00000012869	mtrex	99	74.902	ENSANAG00000023095	MTREX	99	74.902	Aotus_nancymaae
ENSEBUG00000012869	mtrex	99	73.340	ENSACLG00000001921	mtrex	99	73.436	Astatotilapia_calliptera
ENSEBUG00000012869	mtrex	97	71.912	ENSAMXG00000018751	mtrex	99	73.131	Astyanax_mexicanus
ENSEBUG00000012869	mtrex	99	74.280	ENSBTAG00000010518	MTREX	99	74.591	Bos_taurus
ENSEBUG00000012869	mtrex	92	53.368	WBGene00012342	mtr-4	92	53.368	Caenorhabditis_elegans
ENSEBUG00000012869	mtrex	99	73.876	ENSCJAG00000001773	MTREX	99	73.876	Callithrix_jacchus
ENSEBUG00000012869	mtrex	99	74.591	ENSCAFG00000006818	MTREX	99	74.591	Canis_familiaris
ENSEBUG00000012869	mtrex	99	74.591	ENSCAFG00020024352	MTREX	99	74.591	Canis_lupus_dingo
ENSEBUG00000012869	mtrex	99	74.398	ENSCHIG00000024413	MTREX	99	74.398	Capra_hircus
ENSEBUG00000012869	mtrex	93	73.077	ENSTSYG00000007389	MTREX	99	74.328	Carlito_syrichta
ENSEBUG00000012869	mtrex	89	59.236	ENSCAPG00000008696	MTREX	97	59.236	Cavia_aperea
ENSEBUG00000012869	mtrex	99	74.495	ENSCPOG00000009797	MTREX	99	74.495	Cavia_porcellus
ENSEBUG00000012869	mtrex	99	73.971	ENSCCAG00000014177	MTREX	99	74.302	Cebus_capucinus
ENSEBUG00000012869	mtrex	99	73.805	ENSCATG00000042153	MTREX	99	74.398	Cercocebus_atys
ENSEBUG00000012869	mtrex	99	73.946	ENSCLAG00000006622	MTREX	99	74.302	Chinchilla_lanigera
ENSEBUG00000012869	mtrex	99	71.211	ENSCSAG00000016445	MTREX	99	71.785	Chlorocebus_sabaeus
ENSEBUG00000012869	mtrex	62	95.833	ENSCHOG00000010936	-	62	95.833	Choloepus_hoffmanni
ENSEBUG00000012869	mtrex	99	75.193	ENSCPBG00000026551	MTREX	93	75.483	Chrysemys_picta_bellii
ENSEBUG00000012869	mtrex	100	65.959	ENSCING00000003239	-	100	65.959	Ciona_intestinalis
ENSEBUG00000012869	mtrex	100	64.655	ENSCSAVG00000009304	-	100	69.107	Ciona_savignyi
ENSEBUG00000012869	mtrex	99	74.495	ENSCANG00000035770	MTREX	99	74.495	Colobus_angolensis_palliatus
ENSEBUG00000012869	mtrex	99	73.876	ENSCGRG00001024680	Mtrex	99	74.495	Cricetulus_griseus_chok1gshd
ENSEBUG00000012869	mtrex	99	73.876	ENSCGRG00000000307	Mtrex	99	74.495	Cricetulus_griseus_crigri
ENSEBUG00000012869	mtrex	99	73.199	ENSCSEG00000018621	mtrex	98	73.199	Cynoglossus_semilaevis
ENSEBUG00000012869	mtrex	99	72.921	ENSCVAG00000004556	mtrex	99	73.192	Cyprinodon_variegatus
ENSEBUG00000012869	mtrex	99	74.443	ENSDARG00000013457	mtrex	99	74.443	Danio_rerio
ENSEBUG00000012869	mtrex	99	74.113	ENSDNOG00000015375	MTREX	99	74.113	Dasypus_novemcinctus
ENSEBUG00000012869	mtrex	99	73.805	ENSDORG00000006782	Mtrex	99	74.110	Dipodomys_ordii
ENSEBUG00000012869	mtrex	98	60.930	FBgn0001986	Mtr4	96	61.029	Drosophila_melanogaster
ENSEBUG00000012869	mtrex	85	84.314	ENSETEG00000000727	MTREX	83	84.314	Echinops_telfairi
ENSEBUG00000012869	mtrex	99	74.544	ENSEASG00005013270	MTREX	99	74.495	Equus_asinus_asinus
ENSEBUG00000012869	mtrex	99	74.640	ENSECAG00000023723	MTREX	99	76.414	Equus_caballus
ENSEBUG00000012869	mtrex	98	66.569	ENSEEUG00000000527	MTREX	99	66.928	Erinaceus_europaeus
ENSEBUG00000012869	mtrex	98	74.778	ENSELUG00000004898	mtrex	100	78.466	Esox_lucius
ENSEBUG00000012869	mtrex	99	74.302	ENSFCAG00000010575	MTREX	99	74.302	Felis_catus
ENSEBUG00000012869	mtrex	99	74.903	ENSFALG00000010850	MTREX	99	74.903	Ficedula_albicollis
ENSEBUG00000012869	mtrex	99	74.206	ENSFDAG00000011199	MTREX	99	74.206	Fukomys_damarensis
ENSEBUG00000012869	mtrex	99	73.121	ENSFHEG00000023014	mtrex	99	72.517	Fundulus_heteroclitus
ENSEBUG00000012869	mtrex	99	71.649	ENSGMOG00000014702	mtrex	99	71.785	Gadus_morhua
ENSEBUG00000012869	mtrex	99	75.534	ENSGALG00000014709	MTREX	86	75.534	Gallus_gallus
ENSEBUG00000012869	mtrex	99	72.596	ENSGAFG00000012425	mtrex	97	76.458	Gambusia_affinis
ENSEBUG00000012869	mtrex	99	70.413	ENSGACG00000016260	mtrex	96	75.761	Gasterosteus_aculeatus
ENSEBUG00000012869	mtrex	99	75.097	ENSGAGG00000020036	MTREX	99	75.386	Gopherus_agassizii
ENSEBUG00000012869	mtrex	99	73.614	ENSGGOG00000001867	MTREX	99	74.206	Gorilla_gorilla
ENSEBUG00000012869	mtrex	99	73.340	ENSHBUG00000006229	mtrex	99	73.436	Haplochromis_burtoni
ENSEBUG00000012869	mtrex	99	74.209	ENSHGLG00000019445	SKIV2L2	99	74.470	Heterocephalus_glaber_female
ENSEBUG00000012869	mtrex	99	74.209	ENSHGLG00100011833	SKIV2L2	99	74.470	Heterocephalus_glaber_male
ENSEBUG00000012869	mtrex	92	74.440	ENSHCOG00000019995	mtrex	100	74.440	Hippocampus_comes
ENSEBUG00000012869	mtrex	99	74.927	ENSIPUG00000024348	skiv2l2	99	74.927	Ictalurus_punctatus
ENSEBUG00000012869	mtrex	99	73.709	ENSSTOG00000010802	MTREX	99	74.302	Ictidomys_tridecemlineatus
ENSEBUG00000012869	mtrex	99	71.261	ENSJJAG00000020975	Mtrex	99	71.724	Jaculus_jaculus
ENSEBUG00000012869	mtrex	99	73.017	ENSKMAG00000012642	mtrex	99	73.017	Kryptolebias_marmoratus
ENSEBUG00000012869	mtrex	99	72.196	ENSLBEG00000019367	mtrex	99	75.104	Labrus_bergylta
ENSEBUG00000012869	mtrex	99	75.388	ENSLACG00000009075	MTREX	99	75.388	Latimeria_chalumnae
ENSEBUG00000012869	mtrex	99	74.710	ENSLOCG00000010186	mtrex	99	74.710	Lepisosteus_oculatus
ENSEBUG00000012869	mtrex	99	72.447	ENSLAFG00000010497	MTREX	99	72.447	Loxodonta_africana
ENSEBUG00000012869	mtrex	99	73.805	ENSMFAG00000031610	MTREX	99	74.398	Macaca_fascicularis
ENSEBUG00000012869	mtrex	99	74.568	ENSMMUG00000010379	MTREX	99	74.568	Macaca_mulatta
ENSEBUG00000012869	mtrex	99	73.805	ENSMNEG00000032746	MTREX	99	74.398	Macaca_nemestrina
ENSEBUG00000012869	mtrex	99	73.805	ENSMLEG00000041051	MTREX	99	74.398	Mandrillus_leucophaeus
ENSEBUG00000012869	mtrex	99	72.410	ENSMAMG00000016753	mtrex	97	75.330	Mastacembelus_armatus
ENSEBUG00000012869	mtrex	99	73.340	ENSMZEG00005000414	mtrex	99	73.436	Maylandia_zebra
ENSEBUG00000012869	mtrex	94	57.835	ENSMGAG00000003980	MTREX	98	57.835	Meleagris_gallopavo
ENSEBUG00000012869	mtrex	99	73.971	ENSMAUG00000010727	Mtrex	99	74.687	Mesocricetus_auratus
ENSEBUG00000012869	mtrex	99	73.805	ENSMICG00000012779	MTREX	99	74.302	Microcebus_murinus
ENSEBUG00000012869	mtrex	99	73.709	ENSMOCG00000019886	Mtrex	99	74.302	Microtus_ochrogaster
ENSEBUG00000012869	mtrex	99	72.147	ENSMMOG00000002476	mtrex	99	72.147	Mola_mola
ENSEBUG00000012869	mtrex	99	75.072	ENSMODG00000019494	MTREX	99	75.072	Monodelphis_domestica
ENSEBUG00000012869	mtrex	93	71.951	ENSMALG00000002917	mtrex	99	71.951	Monopterus_albus
ENSEBUG00000012869	mtrex	99	74.450	MGP_CAROLIEiJ_G0018896	Mtrex	99	74.880	Mus_caroli
ENSEBUG00000012869	mtrex	99	74.138	ENSMUSG00000016018	Mtrex	99	74.446	Mus_musculus
ENSEBUG00000012869	mtrex	99	73.755	MGP_PahariEiJ_G0015967	Mtrex	99	74.060	Mus_pahari
ENSEBUG00000012869	mtrex	99	74.138	MGP_SPRETEiJ_G0019775	Mtrex	99	74.446	Mus_spretus
ENSEBUG00000012869	mtrex	99	74.398	ENSMPUG00000007619	MTREX	99	74.398	Mustela_putorius_furo
ENSEBUG00000012869	mtrex	99	74.092	ENSMLUG00000001152	MTREX	99	74.212	Myotis_lucifugus
ENSEBUG00000012869	mtrex	99	73.805	ENSNGAG00000011938	Mtrex	99	74.398	Nannospalax_galili
ENSEBUG00000012869	mtrex	99	73.340	ENSNBRG00000011293	mtrex	99	73.436	Neolamprologus_brichardi
ENSEBUG00000012869	mtrex	99	71.278	ENSNLEG00000001494	MTREX	99	71.278	Nomascus_leucogenys
ENSEBUG00000012869	mtrex	84	84.314	ENSMEUG00000006496	-	83	84.314	Notamacropus_eugenii
ENSEBUG00000012869	mtrex	99	61.649	ENSOPRG00000008009	MTREX	99	62.079	Ochotona_princeps
ENSEBUG00000012869	mtrex	99	73.821	ENSODEG00000017234	MTREX	99	73.821	Octodon_degus
ENSEBUG00000012869	mtrex	99	73.218	ENSONIG00000007587	mtrex	99	73.314	Oreochromis_niloticus
ENSEBUG00000012869	mtrex	51	75.000	ENSOANG00000004885	-	99	75.000	Ornithorhynchus_anatinus
ENSEBUG00000012869	mtrex	99	74.234	ENSOCUG00000004463	MTREX	99	74.687	Oryctolagus_cuniculus
ENSEBUG00000012869	mtrex	99	72.613	ENSORLG00000005443	mtrex	99	72.613	Oryzias_latipes
ENSEBUG00000012869	mtrex	99	72.517	ENSORLG00020006329	mtrex	99	72.517	Oryzias_latipes_hni
ENSEBUG00000012869	mtrex	99	72.517	ENSORLG00015012924	mtrex	99	72.517	Oryzias_latipes_hsok
ENSEBUG00000012869	mtrex	99	72.404	ENSOMEG00000008825	mtrex	99	72.404	Oryzias_melastigma
ENSEBUG00000012869	mtrex	99	74.495	ENSOGAG00000002886	MTREX	99	74.495	Otolemur_garnettii
ENSEBUG00000012869	mtrex	99	74.184	ENSOARG00000007764	MTREX	99	74.184	Ovis_aries
ENSEBUG00000012869	mtrex	99	74.206	ENSPPAG00000039291	MTREX	99	74.206	Pan_paniscus
ENSEBUG00000012869	mtrex	99	74.302	ENSPPRG00000019701	MTREX	99	74.302	Panthera_pardus
ENSEBUG00000012869	mtrex	99	72.955	ENSPTIG00000009313	MTREX	99	72.955	Panthera_tigris_altaica
ENSEBUG00000012869	mtrex	99	74.206	ENSPTRG00000016878	MTREX	99	74.206	Pan_troglodytes
ENSEBUG00000012869	mtrex	99	73.709	ENSPANG00000009697	MTREX	99	74.302	Papio_anubis
ENSEBUG00000012869	mtrex	99	74.566	ENSPKIG00000020833	mtrex	99	74.566	Paramormyrops_kingsleyae
ENSEBUG00000012869	mtrex	99	75.097	ENSPSIG00000012150	MTREX	99	75.338	Pelodiscus_sinensis
ENSEBUG00000012869	mtrex	99	72.464	ENSPMGG00000002582	mtrex	99	72.464	Periophthalmus_magnuspinnatus
ENSEBUG00000012869	mtrex	95	65.447	ENSPMAG00000009668	mtrex	99	65.447	Petromyzon_marinus
ENSEBUG00000012869	mtrex	92	78.986	ENSPCIG00000024730	MTREX	100	78.986	Phascolarctos_cinereus
ENSEBUG00000012869	mtrex	76	75.919	ENSPFOG00000003141	mtrex	100	76.015	Poecilia_formosa
ENSEBUG00000012869	mtrex	99	73.114	ENSPLAG00000021311	mtrex	99	73.185	Poecilia_latipinna
ENSEBUG00000012869	mtrex	92	76.681	ENSPMEG00000010597	mtrex	99	76.681	Poecilia_mexicana
ENSEBUG00000012869	mtrex	99	73.114	ENSPREG00000003089	mtrex	99	73.185	Poecilia_reticulata
ENSEBUG00000012869	mtrex	98	73.567	ENSPPYG00000015469	MTREX	97	74.168	Pongo_abelii
ENSEBUG00000012869	mtrex	94	62.791	ENSPCAG00000013120	MTREX	94	62.791	Procavia_capensis
ENSEBUG00000012869	mtrex	98	69.811	ENSPCOG00000018092	MTREX	99	70.222	Propithecus_coquereli
ENSEBUG00000012869	mtrex	99	74.398	ENSPVAG00000002445	MTREX	99	74.398	Pteropus_vampyrus
ENSEBUG00000012869	mtrex	99	73.244	ENSPNYG00000006164	mtrex	99	73.340	Pundamilia_nyererei
ENSEBUG00000012869	mtrex	99	74.783	ENSPNAG00000008794	mtrex	99	74.783	Pygocentrus_nattereri
ENSEBUG00000012869	mtrex	99	73.475	ENSRNOG00000010125	Mtrex	96	74.074	Rattus_norvegicus
ENSEBUG00000012869	mtrex	99	72.859	ENSRBIG00000034930	MTREX	99	72.859	Rhinopithecus_bieti
ENSEBUG00000012869	mtrex	99	74.495	ENSRROG00000039895	MTREX	99	74.495	Rhinopithecus_roxellana
ENSEBUG00000012869	mtrex	90	55.824	YJL050W	MTR4	95	53.020	Saccharomyces_cerevisiae
ENSEBUG00000012869	mtrex	100	74.563	ENSSBOG00000026693	MTREX	99	74.563	Saimiri_boliviensis_boliviensis
ENSEBUG00000012869	mtrex	95	77.449	ENSSHAG00000004600	MTREX	98	77.449	Sarcophilus_harrisii
ENSEBUG00000012869	mtrex	99	74.759	ENSSFOG00015014355	skiv2l2	99	74.759	Scleropages_formosus
ENSEBUG00000012869	mtrex	99	72.859	ENSSMAG00000007572	mtrex	99	72.859	Scophthalmus_maximus
ENSEBUG00000012869	mtrex	99	72.850	ENSSDUG00000023789	mtrex	99	72.850	Seriola_dumerili
ENSEBUG00000012869	mtrex	99	72.754	ENSSLDG00000006301	mtrex	99	72.754	Seriola_lalandi_dorsalis
ENSEBUG00000012869	mtrex	92	78.444	ENSSARG00000008387	MTREX	99	73.532	Sorex_araneus
ENSEBUG00000012869	mtrex	90	72.305	ENSSPUG00000007071	MTREX	95	72.305	Sphenodon_punctatus
ENSEBUG00000012869	mtrex	99	71.609	ENSSPAG00000011319	mtrex	99	71.996	Stegastes_partitus
ENSEBUG00000012869	mtrex	99	74.591	ENSSSCG00000016911	MTREX	99	74.591	Sus_scrofa
ENSEBUG00000012869	mtrex	99	74.783	ENSTGUG00000002480	MTREX	99	74.783	Taeniopygia_guttata
ENSEBUG00000012869	mtrex	99	72.534	ENSTRUG00000014571	mtrex	99	72.534	Takifugu_rubripes
ENSEBUG00000012869	mtrex	99	61.377	ENSTBEG00000007769	MTREX	87	68.282	Tupaia_belangeri
ENSEBUG00000012869	mtrex	99	74.591	ENSTTRG00000008678	MTREX	99	74.591	Tursiops_truncatus
ENSEBUG00000012869	mtrex	99	74.302	ENSUAMG00000023061	MTREX	99	74.302	Ursus_americanus
ENSEBUG00000012869	mtrex	99	74.369	ENSUMAG00000009373	MTREX	99	79.310	Ursus_maritimus
ENSEBUG00000012869	mtrex	99	67.661	ENSVPAG00000011174	MTREX	99	67.661	Vicugna_pacos
ENSEBUG00000012869	mtrex	99	74.495	ENSVVUG00000021337	MTREX	99	74.495	Vulpes_vulpes
ENSEBUG00000012869	mtrex	99	74.563	ENSXETG00000032798	MTREX	99	74.563	Xenopus_tropicalis
ENSEBUG00000012869	mtrex	99	73.211	ENSXMAG00000004799	mtrex	99	73.088	Xiphophorus_maculatus