EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000012895 (Gene tree)
Gene ID: -
Gene Symbol: tsr2
Alias: chunp6926|dt1p1a10l|un-named hi1116a|unm hi1116a|zgc:109784
Full Name: TSR2%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 37514 bases
Position: chrFYBX02009534.1:963264-1000777
Accession: ZDB-GENE-021231-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000020864	WGG	PF10273.9	3.2e-25	1	1
ENSEBUP00000020877	WGG	PF10273.9	6.3e-25	1	1
ENSEBUP00000020896	WGG	PF10273.9	7.6e-25	1	1
ENSEBUP00000020889	WGG	PF10273.9	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021471	-	2174	-	ENSEBUP00000020896	228 (aa)	-	-
ENSEBUT00000021465	-	2412	-	ENSEBUP00000020889	214 (aa)	-	-
ENSEBUT00000021452	-	2640	-	ENSEBUP00000020877	185 (aa)	-	-
ENSEBUT00000021440	-	2184	-	ENSEBUP00000020864	152 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000012895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000012895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000012895	tsr2	92	40.217	ENSG00000158526	TSR2	95	40.217	Homo_sapiens
ENSEBUG00000012895	tsr2	84	41.772	ENSAPOG00000004150	-	89	40.260	Acanthochromis_polyacanthus
ENSEBUG00000012895	tsr2	93	37.368	ENSAMEG00000002469	TSR2	96	38.021	Ailuropoda_melanoleuca
ENSEBUG00000012895	tsr2	95	44.828	ENSACIG00000004880	tsr2	87	45.522	Amphilophus_citrinellus
ENSEBUG00000012895	tsr2	96	45.890	ENSAOCG00000015893	tsr2	100	42.162	Amphiprion_ocellaris
ENSEBUG00000012895	tsr2	96	45.890	ENSAPEG00000023549	tsr2	100	42.162	Amphiprion_percula
ENSEBUG00000012895	tsr2	95	41.808	ENSATEG00000019009	-	98	41.808	Anabas_testudineus
ENSEBUG00000012895	tsr2	91	41.758	ENSACAG00000012270	TSR2	95	44.693	Anolis_carolinensis
ENSEBUG00000012895	tsr2	91	39.344	ENSANAG00000000062	TSR2	95	39.344	Aotus_nancymaae
ENSEBUG00000012895	tsr2	95	41.143	ENSACLG00000014269	tsr2	98	41.143	Astatotilapia_calliptera
ENSEBUG00000012895	tsr2	95	46.774	ENSAMXG00000016817	tsr2	87	46.774	Astyanax_mexicanus
ENSEBUG00000012895	tsr2	93	39.247	ENSBTAG00000015858	TSR2	96	39.247	Bos_taurus
ENSEBUG00000012895	tsr2	91	37.297	ENSCJAG00000000251	TSR2	95	38.624	Callithrix_jacchus
ENSEBUG00000012895	tsr2	93	39.474	ENSCAFG00000016440	TSR2	96	39.560	Canis_familiaris
ENSEBUG00000012895	tsr2	93	39.474	ENSCAFG00020014044	TSR2	96	39.560	Canis_lupus_dingo
ENSEBUG00000012895	tsr2	76	42.609	ENSCHIG00000009963	-	60	42.609	Capra_hircus
ENSEBUG00000012895	tsr2	91	38.889	ENSTSYG00000005670	-	95	38.889	Carlito_syrichta
ENSEBUG00000012895	tsr2	89	38.857	ENSTSYG00000031321	-	53	49.462	Carlito_syrichta
ENSEBUG00000012895	tsr2	91	34.254	ENSTSYG00000031644	-	63	41.880	Carlito_syrichta
ENSEBUG00000012895	tsr2	91	38.636	ENSCPOG00000033139	TSR2	94	36.364	Cavia_porcellus
ENSEBUG00000012895	tsr2	91	39.344	ENSCCAG00000025421	TSR2	95	39.344	Cebus_capucinus
ENSEBUG00000012895	tsr2	92	40.761	ENSCATG00000036868	-	95	40.761	Cercocebus_atys
ENSEBUG00000012895	tsr2	92	40.426	ENSCATG00000045152	-	95	40.741	Cercocebus_atys
ENSEBUG00000012895	tsr2	89	45.324	ENSCLAG00000007235	TSR2	95	36.757	Chinchilla_lanigera
ENSEBUG00000012895	tsr2	92	39.459	ENSCSAG00000000402	-	95	40.860	Chlorocebus_sabaeus
ENSEBUG00000012895	tsr2	78	47.899	ENSCSAG00000012366	-	62	47.899	Chlorocebus_sabaeus
ENSEBUG00000012895	tsr2	93	39.247	ENSCHOG00000001068	TSR2	96	39.247	Choloepus_hoffmanni
ENSEBUG00000012895	tsr2	92	34.444	ENSCING00000002386	-	93	34.444	Ciona_intestinalis
ENSEBUG00000012895	tsr2	92	33.702	ENSCSAVG00000009298	-	55	41.905	Ciona_savignyi
ENSEBUG00000012895	tsr2	82	36.527	ENSCANG00000036773	-	88	36.527	Colobus_angolensis_palliatus
ENSEBUG00000012895	tsr2	93	40.860	ENSCANG00000043156	-	96	40.860	Colobus_angolensis_palliatus
ENSEBUG00000012895	tsr2	88	43.609	ENSCGRG00001023321	Tsr2	95	36.842	Cricetulus_griseus_chok1gshd
ENSEBUG00000012895	tsr2	88	43.609	ENSCGRG00000010855	Tsr2	95	37.368	Cricetulus_griseus_crigri
ENSEBUG00000012895	tsr2	99	37.297	ENSCSEG00000017003	tsr2	98	37.297	Cynoglossus_semilaevis
ENSEBUG00000012895	tsr2	90	51.825	ENSCVAG00000001845	tsr2	98	44.000	Cyprinodon_variegatus
ENSEBUG00000012895	tsr2	95	46.961	ENSDARG00000005772	tsr2	98	54.622	Danio_rerio
ENSEBUG00000012895	tsr2	87	46.324	ENSDORG00000025574	Tsr2	95	38.889	Dipodomys_ordii
ENSEBUG00000012895	tsr2	88	46.043	ENSETEG00000018510	TSR2	96	38.251	Echinops_telfairi
ENSEBUG00000012895	tsr2	92	40.426	ENSEASG00005013005	TSR2	95	40.426	Equus_asinus_asinus
ENSEBUG00000012895	tsr2	92	40.426	ENSECAG00000029844	TSR2	82	40.426	Equus_caballus
ENSEBUG00000012895	tsr2	91	42.775	ENSELUG00000007768	tsr2	95	42.442	Esox_lucius
ENSEBUG00000012895	tsr2	93	39.560	ENSFCAG00000002226	TSR2	96	39.560	Felis_catus
ENSEBUG00000012895	tsr2	91	39.773	ENSFDAG00000011554	TSR2	94	38.636	Fukomys_damarensis
ENSEBUG00000012895	tsr2	52	51.899	ENSGMOG00000007150	tsr2	89	51.899	Gadus_morhua
ENSEBUG00000012895	tsr2	91	41.279	ENSGACG00000000595	tsr2	95	41.279	Gasterosteus_aculeatus
ENSEBUG00000012895	tsr2	71	52.778	ENSGAGG00000007629	TSR2	59	52.778	Gopherus_agassizii
ENSEBUG00000012895	tsr2	92	40.217	ENSGGOG00000041368	TSR2	95	40.217	Gorilla_gorilla
ENSEBUG00000012895	tsr2	95	40.113	ENSHBUG00000020989	tsr2	79	39.665	Haplochromis_burtoni
ENSEBUG00000012895	tsr2	92	42.857	ENSHGLG00000002188	TSR2	95	41.714	Heterocephalus_glaber_female
ENSEBUG00000012895	tsr2	92	42.857	ENSHGLG00100001234	TSR2	95	41.714	Heterocephalus_glaber_male
ENSEBUG00000012895	tsr2	89	45.185	ENSHCOG00000017585	-	59	45.238	Hippocampus_comes
ENSEBUG00000012895	tsr2	96	43.005	ENSIPUG00000012170	tsr2	99	43.005	Ictalurus_punctatus
ENSEBUG00000012895	tsr2	92	38.919	ENSSTOG00000033612	TSR2	95	38.919	Ictidomys_tridecemlineatus
ENSEBUG00000012895	tsr2	92	38.860	ENSJJAG00000004561	Tsr2	95	38.421	Jaculus_jaculus
ENSEBUG00000012895	tsr2	95	45.198	ENSKMAG00000012611	-	98	41.899	Kryptolebias_marmoratus
ENSEBUG00000012895	tsr2	83	44.444	ENSLBEG00000017316	tsr2	51	44.444	Labrus_bergylta
ENSEBUG00000012895	tsr2	92	39.153	ENSLAFG00000018093	TSR2	95	38.251	Loxodonta_africana
ENSEBUG00000012895	tsr2	92	40.761	ENSMFAG00000001364	TSR2	95	40.761	Macaca_fascicularis
ENSEBUG00000012895	tsr2	92	38.378	ENSMMUG00000010044	-	95	39.459	Macaca_mulatta
ENSEBUG00000012895	tsr2	92	40.761	ENSMMUG00000012612	TSR2	97	39.881	Macaca_mulatta
ENSEBUG00000012895	tsr2	92	40.761	ENSMNEG00000041996	TSR2	95	40.761	Macaca_nemestrina
ENSEBUG00000012895	tsr2	92	40.761	ENSMLEG00000032632	TSR2	95	40.761	Mandrillus_leucophaeus
ENSEBUG00000012895	tsr2	95	38.764	ENSMAMG00000011540	tsr2	98	38.764	Mastacembelus_armatus
ENSEBUG00000012895	tsr2	95	41.143	ENSMZEG00005026752	tsr2	98	41.143	Maylandia_zebra
ENSEBUG00000012895	tsr2	87	47.727	ENSMAUG00000012389	Tsr2	94	39.683	Mesocricetus_auratus
ENSEBUG00000012895	tsr2	92	40.110	ENSMICG00000010116	TSR2	95	37.368	Microcebus_murinus
ENSEBUG00000012895	tsr2	87	46.970	ENSMOCG00000006662	Tsr2	94	38.624	Microtus_ochrogaster
ENSEBUG00000012895	tsr2	91	36.207	ENSMMOG00000009751	-	94	34.682	Mola_mola
ENSEBUG00000012895	tsr2	86	49.618	ENSMALG00000014552	tsr2	95	40.462	Monopterus_albus
ENSEBUG00000012895	tsr2	88	48.120	MGP_CAROLIEiJ_G0033491	Tsr2	95	40.000	Mus_caroli
ENSEBUG00000012895	tsr2	88	48.120	ENSMUSG00000025264	Tsr2	95	40.000	Mus_musculus
ENSEBUG00000012895	tsr2	88	47.368	MGP_PahariEiJ_G0032030	Tsr2	95	38.947	Mus_pahari
ENSEBUG00000012895	tsr2	88	48.120	MGP_SPRETEiJ_G0034661	Tsr2	95	40.000	Mus_spretus
ENSEBUG00000012895	tsr2	93	39.560	ENSMPUG00000011436	TSR2	96	39.560	Mustela_putorius_furo
ENSEBUG00000012895	tsr2	89	37.634	ENSMLUG00000010613	TSR2	93	37.634	Myotis_lucifugus
ENSEBUG00000012895	tsr2	92	38.860	ENSNGAG00000021351	Tsr2	95	38.860	Nannospalax_galili
ENSEBUG00000012895	tsr2	94	45.455	ENSNBRG00000007965	tsr2	100	40.217	Neolamprologus_brichardi
ENSEBUG00000012895	tsr2	92	40.217	ENSNLEG00000030041	TSR2	95	40.217	Nomascus_leucogenys
ENSEBUG00000012895	tsr2	64	46.392	ENSMEUG00000006729	-	78	46.392	Notamacropus_eugenii
ENSEBUG00000012895	tsr2	82	36.184	ENSMEUG00000000188	-	100	36.184	Notamacropus_eugenii
ENSEBUG00000012895	tsr2	80	43.802	ENSOPRG00000016595	TSR2	86	46.364	Ochotona_princeps
ENSEBUG00000012895	tsr2	93	38.462	ENSODEG00000000542	-	96	38.503	Octodon_degus
ENSEBUG00000012895	tsr2	92	37.838	ENSODEG00000014931	-	99	36.757	Octodon_degus
ENSEBUG00000012895	tsr2	86	41.045	ENSODEG00000019951	-	99	36.313	Octodon_degus
ENSEBUG00000012895	tsr2	95	42.373	ENSONIG00000000763	tsr2	98	40.341	Oreochromis_niloticus
ENSEBUG00000012895	tsr2	84	52.344	ENSOANG00000000707	TSR2	83	55.085	Ornithorhynchus_anatinus
ENSEBUG00000012895	tsr2	83	40.964	ENSOCUG00000014714	-	100	40.000	Oryctolagus_cuniculus
ENSEBUG00000012895	tsr2	92	40.110	ENSOCUG00000027678	-	95	40.110	Oryctolagus_cuniculus
ENSEBUG00000012895	tsr2	91	42.353	ENSORLG00000022662	tsr2	98	40.113	Oryzias_latipes
ENSEBUG00000012895	tsr2	91	42.353	ENSORLG00020003033	tsr2	98	39.548	Oryzias_latipes_hni
ENSEBUG00000012895	tsr2	91	42.775	ENSORLG00015017253	tsr2	98	39.326	Oryzias_latipes_hsok
ENSEBUG00000012895	tsr2	95	42.222	ENSOMEG00000011483	tsr2	98	39.665	Oryzias_melastigma
ENSEBUG00000012895	tsr2	95	42.045	ENSOMEG00000013975	-	98	39.444	Oryzias_melastigma
ENSEBUG00000012895	tsr2	92	38.462	ENSOGAG00000003468	TSR2	95	38.462	Otolemur_garnettii
ENSEBUG00000012895	tsr2	76	43.478	ENSOARG00000009487	-	66	43.478	Ovis_aries
ENSEBUG00000012895	tsr2	92	40.217	ENSOARG00000006467	-	95	40.217	Ovis_aries
ENSEBUG00000012895	tsr2	92	40.217	ENSPPAG00000021242	TSR2	95	40.217	Pan_paniscus
ENSEBUG00000012895	tsr2	93	39.560	ENSPPRG00000001337	TSR2	96	39.560	Panthera_pardus
ENSEBUG00000012895	tsr2	93	39.011	ENSPTIG00000007138	TSR2	96	39.011	Panthera_tigris_altaica
ENSEBUG00000012895	tsr2	92	40.217	ENSPTRG00000045904	TSR2	95	40.217	Pan_troglodytes
ENSEBUG00000012895	tsr2	92	40.761	ENSPANG00000008042	-	95	40.761	Papio_anubis
ENSEBUG00000012895	tsr2	92	38.919	ENSPANG00000002291	-	99	38.919	Papio_anubis
ENSEBUG00000012895	tsr2	93	43.478	ENSPKIG00000023676	tsr2	96	43.716	Paramormyrops_kingsleyae
ENSEBUG00000012895	tsr2	61	51.087	ENSPMGG00000002963	tsr2	98	35.326	Periophthalmus_magnuspinnatus
ENSEBUG00000012895	tsr2	92	39.130	ENSPEMG00000015713	Tsr2	95	40.000	Peromyscus_maniculatus_bairdii
ENSEBUG00000012895	tsr2	100	46.269	ENSPMAG00000001705	tsr2	100	46.766	Petromyzon_marinus
ENSEBUG00000012895	tsr2	100	37.811	ENSPCIG00000024314	-	95	37.811	Phascolarctos_cinereus
ENSEBUG00000012895	tsr2	95	45.000	ENSPFOG00000011824	tsr2	98	44.444	Poecilia_formosa
ENSEBUG00000012895	tsr2	93	48.227	ENSPLAG00000023520	tsr2	98	45.455	Poecilia_latipinna
ENSEBUG00000012895	tsr2	93	48.227	ENSPMEG00000000360	tsr2	98	45.455	Poecilia_mexicana
ENSEBUG00000012895	tsr2	95	46.591	ENSPREG00000013009	tsr2	98	46.023	Poecilia_reticulata
ENSEBUG00000012895	tsr2	92	40.217	ENSPPYG00000020381	-	68	40.217	Pongo_abelii
ENSEBUG00000012895	tsr2	91	44.681	ENSPCOG00000002354	TSR2	96	37.500	Propithecus_coquereli
ENSEBUG00000012895	tsr2	68	47.573	ENSPVAG00000000034	TSR2	85	47.573	Pteropus_vampyrus
ENSEBUG00000012895	tsr2	95	40.113	ENSPNYG00000019995	tsr2	79	39.665	Pundamilia_nyererei
ENSEBUG00000012895	tsr2	94	48.087	ENSPNAG00000024167	tsr2	97	48.087	Pygocentrus_nattereri
ENSEBUG00000012895	tsr2	88	47.059	ENSRNOG00000002556	NEWGENE_1562416	95	38.860	Rattus_norvegicus
ENSEBUG00000012895	tsr2	92	37.634	ENSRBIG00000003999	-	85	37.634	Rhinopithecus_bieti
ENSEBUG00000012895	tsr2	92	40.761	ENSRBIG00000024521	-	95	40.761	Rhinopithecus_bieti
ENSEBUG00000012895	tsr2	92	40.761	ENSRROG00000029439	-	95	40.761	Rhinopithecus_roxellana
ENSEBUG00000012895	tsr2	92	37.634	ENSRROG00000033469	-	88	37.634	Rhinopithecus_roxellana
ENSEBUG00000012895	tsr2	91	39.344	ENSSBOG00000019737	TSR2	95	39.344	Saimiri_boliviensis_boliviensis
ENSEBUG00000012895	tsr2	83	43.976	ENSSHAG00000004824	-	100	41.916	Sarcophilus_harrisii
ENSEBUG00000012895	tsr2	94	41.538	ENSSFOG00015002207	tsr2	97	43.455	Scleropages_formosus
ENSEBUG00000012895	tsr2	95	40.113	ENSSMAG00000012882	tsr2	98	39.444	Scophthalmus_maximus
ENSEBUG00000012895	tsr2	90	47.445	ENSSDUG00000019445	tsr2	98	39.106	Seriola_dumerili
ENSEBUG00000012895	tsr2	90	47.445	ENSSLDG00000005598	tsr2	98	39.665	Seriola_lalandi_dorsalis
ENSEBUG00000012895	tsr2	94	42.135	ENSSPUG00000019286	TSR2	96	44.382	Sphenodon_punctatus
ENSEBUG00000012895	tsr2	92	38.889	ENSSSCG00000012334	TSR2	95	38.889	Sus_scrofa
ENSEBUG00000012895	tsr2	95	43.182	ENSTRUG00000008947	tsr2	98	39.429	Takifugu_rubripes
ENSEBUG00000012895	tsr2	87	41.818	ENSTNIG00000002173	-	100	38.415	Tetraodon_nigroviridis
ENSEBUG00000012895	tsr2	69	52.778	ENSTBEG00000016242	TSR2	73	52.778	Tupaia_belangeri
ENSEBUG00000012895	tsr2	78	31.356	ENSTTRG00000003274	TSR2	63	31.356	Tursiops_truncatus
ENSEBUG00000012895	tsr2	86	46.715	ENSUAMG00000009605	TSR2	95	39.674	Ursus_americanus
ENSEBUG00000012895	tsr2	86	46.715	ENSUMAG00000019189	TSR2	95	39.674	Ursus_maritimus
ENSEBUG00000012895	tsr2	91	34.239	ENSVPAG00000007532	TSR2	100	35.359	Vicugna_pacos
ENSEBUG00000012895	tsr2	88	45.714	ENSVVUG00000002247	TSR2	95	38.503	Vulpes_vulpes
ENSEBUG00000012895	tsr2	94	38.947	ENSXETG00000033574	TSR2	96	39.683	Xenopus_tropicalis
ENSEBUG00000012895	tsr2	98	45.604	ENSXMAG00000024827	tsr2	92	45.055	Xiphophorus_maculatus