EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000013016 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 148992 bases
Position: chrFYBX02009954.1:375498-524489
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000021058	zf-C2H2	PF00096.26	2.7e-28	1	6
ENSEBUP00000021058	zf-C2H2	PF00096.26	2.7e-28	2	6
ENSEBUP00000021058	zf-C2H2	PF00096.26	2.7e-28	3	6
ENSEBUP00000021058	zf-C2H2	PF00096.26	2.7e-28	4	6
ENSEBUP00000021058	zf-C2H2	PF00096.26	2.7e-28	5	6
ENSEBUP00000021058	zf-C2H2	PF00096.26	2.7e-28	6	6
ENSEBUP00000021062	zf-C2H2	PF00096.26	7.3e-28	1	5
ENSEBUP00000021062	zf-C2H2	PF00096.26	7.3e-28	2	5
ENSEBUP00000021062	zf-C2H2	PF00096.26	7.3e-28	3	5
ENSEBUP00000021062	zf-C2H2	PF00096.26	7.3e-28	4	5
ENSEBUP00000021062	zf-C2H2	PF00096.26	7.3e-28	5	5
ENSEBUP00000021058	zf-met	PF12874.7	2.8e-06	1	2
ENSEBUP00000021058	zf-met	PF12874.7	2.8e-06	2	2
ENSEBUP00000021062	zf-met	PF12874.7	8e-06	1	2
ENSEBUP00000021062	zf-met	PF12874.7	8e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000021638	-	1162	-	ENSEBUP00000021062	359 (aa)	-	-
ENSEBUT00000021635	-	1077	-	ENSEBUP00000021058	315 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000013016	-	76	54.545	ENSEBUG00000008157	-	99	61.321
ENSEBUG00000013016	-	82	39.149	ENSEBUG00000013875	-	87	47.525
ENSEBUG00000013016	-	87	52.459	ENSEBUG00000007305	-	90	52.336
ENSEBUG00000013016	-	93	54.386	ENSEBUG00000007308	ZNF845	69	45.588
ENSEBUG00000013016	-	94	41.404	ENSEBUG00000009208	-	68	45.794
ENSEBUG00000013016	-	76	63.380	ENSEBUG00000003236	-	95	77.358
ENSEBUG00000013016	-	83	44.792	ENSEBUG00000006249	-	86	54.082
ENSEBUG00000013016	-	71	59.524	ENSEBUG00000008324	-	50	59.524
ENSEBUG00000013016	-	83	54.128	ENSEBUG00000014597	-	88	58.750
ENSEBUG00000013016	-	93	42.308	ENSEBUG00000016878	-	94	52.459
ENSEBUG00000013016	-	92	47.170	ENSEBUG00000001698	-	96	48.113
ENSEBUG00000013016	-	90	49.231	ENSEBUG00000011244	-	86	57.547
ENSEBUG00000013016	-	86	50.476	ENSEBUG00000012454	-	100	50.000
ENSEBUG00000013016	-	96	70.492	ENSEBUG00000015834	-	100	70.492
ENSEBUG00000013016	-	87	42.727	ENSEBUG00000008107	-	92	62.264
ENSEBUG00000013016	-	95	40.367	ENSEBUG00000002537	-	87	47.664
ENSEBUG00000013016	-	90	52.239	ENSEBUG00000008988	ZNF845	83	52.239
ENSEBUG00000013016	-	93	53.333	ENSEBUG00000010472	-	85	56.604
ENSEBUG00000013016	-	90	44.355	ENSEBUG00000002960	-	62	57.895
ENSEBUG00000013016	-	87	52.778	ENSEBUG00000002454	-	90	55.769
ENSEBUG00000013016	-	76	53.211	ENSEBUG00000014432	-	94	54.717
ENSEBUG00000013016	-	76	62.069	ENSEBUG00000006987	-	87	50.877
ENSEBUG00000013016	-	90	47.692	ENSEBUG00000006080	-	89	47.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013016	-	55	42.857	ENSAPOG00000013065	-	78	43.373	Acanthochromis_polyacanthus
ENSEBUG00000013016	-	77	47.059	ENSACIG00000015835	-	92	43.421	Amphilophus_citrinellus
ENSEBUG00000013016	-	90	42.593	ENSAPEG00000007389	-	91	41.538	Amphiprion_percula
ENSEBUG00000013016	-	57	48.000	ENSACLG00000018707	-	81	48.000	Astatotilapia_calliptera
ENSEBUG00000013016	-	88	43.158	ENSAMXG00000034333	-	53	46.296	Astyanax_mexicanus
ENSEBUG00000013016	-	87	46.729	ENSCSAVG00000001830	-	99	49.020	Ciona_savignyi
ENSEBUG00000013016	-	57	51.807	ENSCVAG00000012207	-	85	51.220	Cyprinodon_variegatus
ENSEBUG00000013016	-	50	46.809	ENSELUG00000010279	-	76	46.809	Esox_lucius
ENSEBUG00000013016	-	56	43.243	ENSFHEG00000017859	-	56	46.154	Fundulus_heteroclitus
ENSEBUG00000013016	-	77	48.750	ENSHBUG00000017843	-	56	47.500	Haplochromis_burtoni
ENSEBUG00000013016	-	56	46.429	ENSHBUG00000021906	-	62	46.429	Haplochromis_burtoni
ENSEBUG00000013016	-	68	47.170	ENSMZEG00005027937	-	61	46.429	Maylandia_zebra
ENSEBUG00000013016	-	74	38.938	ENSMZEG00005027909	-	84	40.000	Maylandia_zebra
ENSEBUG00000013016	-	86	42.857	ENSMALG00000003975	-	53	46.667	Monopterus_albus
ENSEBUG00000013016	-	81	41.026	ENSPMAG00000008196	-	100	39.655	Petromyzon_marinus
ENSEBUG00000013016	-	84	30.702	ENSPMEG00000016966	-	97	43.689	Poecilia_mexicana
ENSEBUG00000013016	-	74	43.519	ENSPREG00000004306	-	77	48.333	Poecilia_reticulata
ENSEBUG00000013016	-	91	44.262	ENSPREG00000009372	-	57	46.269	Poecilia_reticulata
ENSEBUG00000013016	-	90	42.478	ENSPNYG00000017141	-	51	43.478	Pundamilia_nyererei
ENSEBUG00000013016	-	57	48.000	ENSPNYG00000003744	-	81	48.000	Pundamilia_nyererei
ENSEBUG00000013016	-	58	44.444	ENSSMAG00000009679	-	76	46.429	Scophthalmus_maximus
ENSEBUG00000013016	-	77	44.262	ENSSDUG00000000786	-	92	51.316	Seriola_dumerili
ENSEBUG00000013016	-	53	47.170	ENSSPAG00000009396	-	72	47.170	Stegastes_partitus
ENSEBUG00000013016	-	52	46.032	ENSSPAG00000000064	-	71	47.500	Stegastes_partitus
ENSEBUG00000013016	-	75	45.370	ENSTRUG00000025189	-	72	50.000	Takifugu_rubripes