EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000013453 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 144064 bases
Position: chrFYBX02009427.1:541675-685738
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000021816	RNA_pol	PF00940.19	4.1e-164	1	1
ENSEBUP00000021846	RNA_pol	PF00940.19	1.6e-158	1	1
ENSEBUP00000021886	RNA_pol	PF00940.19	3.1e-142	1	2
ENSEBUP00000021886	RNA_pol	PF00940.19	3.1e-142	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022422	-	6698	-	ENSEBUP00000021846	930 (aa)	-	-
ENSEBUT00000022462	-	6611	-	ENSEBUP00000021886	901 (aa)	-	-
ENSEBUT00000022392	-	4349	-	ENSEBUP00000021816	931 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013453	-	99	49.353	ENSG00000099821	POLRMT	65	75.904	Homo_sapiens
ENSEBUG00000013453	-	99	52.897	ENSAPOG00000003942	polrmt	69	52.897	Acanthochromis_polyacanthus
ENSEBUG00000013453	-	99	49.571	ENSAMEG00000002745	POLRMT	75	49.571	Ailuropoda_melanoleuca
ENSEBUG00000013453	-	99	52.043	ENSACIG00000016078	polrmt	80	52.043	Amphilophus_citrinellus
ENSEBUG00000013453	-	99	53.112	ENSAOCG00000020208	polrmt	71	52.775	Amphiprion_ocellaris
ENSEBUG00000013453	-	99	53.219	ENSAPEG00000007949	polrmt	70	52.397	Amphiprion_percula
ENSEBUG00000013453	-	99	51.447	ENSATEG00000024025	polrmt	74	50.806	Anabas_testudineus
ENSEBUG00000013453	-	93	52.139	ENSAPLG00000003051	POLRMT	84	52.194	Anas_platyrhynchos
ENSEBUG00000013453	-	99	48.553	ENSANAG00000032916	POLRMT	74	48.553	Aotus_nancymaae
ENSEBUG00000013453	-	99	52.468	ENSACLG00000003766	polrmt	71	52.468	Astatotilapia_calliptera
ENSEBUG00000013453	-	93	60.340	ENSAMXG00000018258	polrmt	70	60.340	Astyanax_mexicanus
ENSEBUG00000013453	-	99	49.360	ENSBTAG00000015051	POLRMT	75	49.360	Bos_taurus
ENSEBUG00000013453	-	91	34.045	WBGene00013680	rpom-1	76	34.045	Caenorhabditis_elegans
ENSEBUG00000013453	-	99	48.550	ENSCJAG00000012913	POLRMT	75	48.550	Callithrix_jacchus
ENSEBUG00000013453	-	99	50.000	ENSCAFG00000019711	POLRMT	75	50.108	Canis_familiaris
ENSEBUG00000013453	-	99	50.000	ENSCAFG00020016843	POLRMT	77	50.108	Canis_lupus_dingo
ENSEBUG00000013453	-	99	49.731	ENSCHIG00000013267	POLRMT	76	49.573	Capra_hircus
ENSEBUG00000013453	-	99	44.538	ENSCAPG00000016900	POLRMT	81	44.561	Cavia_aperea
ENSEBUG00000013453	-	99	46.681	ENSCPOG00000023061	POLRMT	76	46.588	Cavia_porcellus
ENSEBUG00000013453	-	99	48.184	ENSCCAG00000025014	POLRMT	74	48.184	Cebus_capucinus
ENSEBUG00000013453	-	99	48.872	ENSCATG00000040393	POLRMT	75	48.872	Cercocebus_atys
ENSEBUG00000013453	-	99	48.817	ENSCLAG00000007473	POLRMT	64	48.925	Chinchilla_lanigera
ENSEBUG00000013453	-	99	48.980	ENSCSAG00000012942	POLRMT	75	48.980	Chlorocebus_sabaeus
ENSEBUG00000013453	-	99	52.637	ENSCPBG00000009869	POLRMT	80	52.637	Chrysemys_picta_bellii
ENSEBUG00000013453	-	87	44.268	ENSCSAVG00000000440	-	99	44.268	Ciona_savignyi
ENSEBUG00000013453	-	99	49.355	ENSCANG00000038011	POLRMT	75	49.355	Colobus_angolensis_palliatus
ENSEBUG00000013453	-	91	58.413	ENSCGRG00001021311	Polrmt	75	58.413	Cricetulus_griseus_chok1gshd
ENSEBUG00000013453	-	99	49.306	ENSCGRG00000011134	Polrmt	76	49.306	Cricetulus_griseus_crigri
ENSEBUG00000013453	-	99	51.238	ENSCSEG00000002734	polrmt	70	51.238	Cynoglossus_semilaevis
ENSEBUG00000013453	-	99	52.575	ENSCVAG00000005949	polrmt	76	52.678	Cyprinodon_variegatus
ENSEBUG00000013453	-	99	52.947	ENSDARG00000101220	polrmt	72	52.947	Danio_rerio
ENSEBUG00000013453	-	90	59.738	ENSDORG00000014125	Polrmt	74	59.738	Dipodomys_ordii
ENSEBUG00000013453	-	99	43.648	FBgn0261938	mtRNApol	70	43.750	Drosophila_melanogaster
ENSEBUG00000013453	-	99	44.861	ENSETEG00000003476	POLRMT	75	44.894	Echinops_telfairi
ENSEBUG00000013453	-	99	50.000	ENSEASG00005021493	POLRMT	75	50.323	Equus_asinus_asinus
ENSEBUG00000013453	-	99	50.000	ENSECAG00000032711	POLRMT	75	50.215	Equus_caballus
ENSEBUG00000013453	-	99	52.258	ENSELUG00000019319	polrmt	69	52.258	Esox_lucius
ENSEBUG00000013453	-	99	50.161	ENSFCAG00000018808	POLRMT	75	50.269	Felis_catus
ENSEBUG00000013453	-	82	48.564	ENSFALG00000013910	POLRMT	72	48.564	Ficedula_albicollis
ENSEBUG00000013453	-	99	47.174	ENSFDAG00000020312	POLRMT	74	47.137	Fukomys_damarensis
ENSEBUG00000013453	-	99	52.694	ENSFHEG00000021239	polrmt	77	52.459	Fundulus_heteroclitus
ENSEBUG00000013453	-	99	49.305	ENSGMOG00000011829	polrmt	79	49.520	Gadus_morhua
ENSEBUG00000013453	-	99	50.864	ENSGALG00000001377	POLRMT	74	50.864	Gallus_gallus
ENSEBUG00000013453	-	99	52.253	ENSGAFG00000003953	polrmt	70	52.253	Gambusia_affinis
ENSEBUG00000013453	-	99	50.858	ENSGACG00000012957	polrmt	78	50.858	Gasterosteus_aculeatus
ENSEBUG00000013453	-	99	52.592	ENSGAGG00000005522	POLRMT	80	52.592	Gopherus_agassizii
ENSEBUG00000013453	-	95	43.630	ENSGGOG00000023264	-	77	43.630	Gorilla_gorilla
ENSEBUG00000013453	-	99	52.253	ENSHBUG00000010005	polrmt	69	52.253	Haplochromis_burtoni
ENSEBUG00000013453	-	99	48.501	ENSHGLG00000019286	POLRMT	69	48.501	Heterocephalus_glaber_female
ENSEBUG00000013453	-	99	47.910	ENSHGLG00100005762	POLRMT	74	47.910	Heterocephalus_glaber_male
ENSEBUG00000013453	-	99	51.647	ENSHCOG00000001565	polrmt	74	52.811	Hippocampus_comes
ENSEBUG00000013453	-	99	53.929	ENSIPUG00000000789	polrmt	74	54.054	Ictalurus_punctatus
ENSEBUG00000013453	-	86	61.806	ENSSTOG00000003431	POLRMT	71	62.111	Ictidomys_tridecemlineatus
ENSEBUG00000013453	-	91	56.869	ENSJJAG00000012916	Polrmt	74	56.869	Jaculus_jaculus
ENSEBUG00000013453	-	99	52.043	ENSKMAG00000004426	polrmt	72	52.043	Kryptolebias_marmoratus
ENSEBUG00000013453	-	99	52.099	ENSLBEG00000016529	polrmt	69	52.099	Labrus_bergylta
ENSEBUG00000013453	-	99	53.805	ENSLACG00000011518	POLRMT	76	53.805	Latimeria_chalumnae
ENSEBUG00000013453	-	99	46.344	ENSLOCG00000005222	polrmt	70	46.344	Lepisosteus_oculatus
ENSEBUG00000013453	-	99	47.966	ENSLAFG00000001860	POLRMT	76	47.812	Loxodonta_africana
ENSEBUG00000013453	-	99	48.767	ENSMFAG00000031466	POLRMT	75	48.767	Macaca_fascicularis
ENSEBUG00000013453	-	99	48.767	ENSMNEG00000039129	POLRMT	76	48.188	Macaca_nemestrina
ENSEBUG00000013453	-	83	65.352	ENSMLEG00000037404	POLRMT	71	65.352	Mandrillus_leucophaeus
ENSEBUG00000013453	-	99	52.960	ENSMAMG00000019284	polrmt	69	52.960	Mastacembelus_armatus
ENSEBUG00000013453	-	99	52.468	ENSMZEG00005009932	polrmt	71	52.468	Maylandia_zebra
ENSEBUG00000013453	-	99	50.161	ENSMGAG00000003243	POLRMT	79	50.161	Meleagris_gallopavo
ENSEBUG00000013453	-	91	58.974	ENSMAUG00000019392	Polrmt	75	58.974	Mesocricetus_auratus
ENSEBUG00000013453	-	99	49.785	ENSMICG00000016701	POLRMT	74	49.785	Microcebus_murinus
ENSEBUG00000013453	-	99	47.425	ENSMOCG00000008868	Polrmt	76	47.425	Microtus_ochrogaster
ENSEBUG00000013453	-	93	48.792	ENSMMOG00000000705	polrmt	69	48.792	Mola_mola
ENSEBUG00000013453	-	99	49.038	ENSMODG00000006478	POLRMT	74	49.038	Monodelphis_domestica
ENSEBUG00000013453	-	99	52.263	ENSMALG00000021224	polrmt	70	52.263	Monopterus_albus
ENSEBUG00000013453	-	91	59.490	MGP_CAROLIEiJ_G0015538	Polrmt	100	60.046	Mus_caroli
ENSEBUG00000013453	-	91	59.330	ENSMUSG00000020329	Polrmt	99	59.584	Mus_musculus
ENSEBUG00000013453	-	91	59.649	MGP_PahariEiJ_G0030951	Polrmt	100	60.046	Mus_pahari
ENSEBUG00000013453	-	91	59.330	MGP_SPRETEiJ_G0016356	Polrmt	100	59.584	Mus_spretus
ENSEBUG00000013453	-	99	49.091	ENSMPUG00000009910	POLRMT	75	49.091	Mustela_putorius_furo
ENSEBUG00000013453	-	99	49.573	ENSMLUG00000009223	POLRMT	75	49.573	Myotis_lucifugus
ENSEBUG00000013453	-	91	59.711	ENSNGAG00000005498	Polrmt	74	59.711	Nannospalax_galili
ENSEBUG00000013453	-	98	52.448	ENSNBRG00000023530	polrmt	69	52.448	Neolamprologus_brichardi
ENSEBUG00000013453	-	99	49.677	ENSNLEG00000000718	POLRMT	74	49.677	Nomascus_leucogenys
ENSEBUG00000013453	-	86	51.180	ENSOPRG00000013579	POLRMT	67	51.250	Ochotona_princeps
ENSEBUG00000013453	-	99	52.361	ENSONIG00000002405	polrmt	80	52.361	Oreochromis_niloticus
ENSEBUG00000013453	-	99	53.419	ENSORLG00000004329	polrmt	69	53.419	Oryzias_latipes
ENSEBUG00000013453	-	99	53.312	ENSORLG00020003896	polrmt	71	53.312	Oryzias_latipes_hni
ENSEBUG00000013453	-	99	52.991	ENSORLG00015022238	polrmt	68	52.991	Oryzias_latipes_hsok
ENSEBUG00000013453	-	99	53.112	ENSOMEG00000008292	polrmt	71	53.112	Oryzias_melastigma
ENSEBUG00000013453	-	99	49.785	ENSOGAG00000007912	POLRMT	74	49.785	Otolemur_garnettii
ENSEBUG00000013453	-	79	61.100	ENSOARG00000008898	POLRMT	63	61.100	Ovis_aries
ENSEBUG00000013453	-	99	47.141	ENSPPAG00000043321	-	74	47.141	Pan_paniscus
ENSEBUG00000013453	-	99	47.953	ENSPPAG00000030853	POLRMT	74	47.953	Pan_paniscus
ENSEBUG00000013453	-	74	55.874	ENSPPRG00000001547	POLRMT	60	55.874	Panthera_pardus
ENSEBUG00000013453	-	99	48.276	ENSPTRG00000010157	POLRMT	71	48.276	Pan_troglodytes
ENSEBUG00000013453	-	99	47.357	ENSPTRG00000039638	-	74	47.357	Pan_troglodytes
ENSEBUG00000013453	-	99	48.872	ENSPANG00000006649	POLRMT	75	48.872	Papio_anubis
ENSEBUG00000013453	-	99	52.575	ENSPKIG00000024580	polrmt	72	52.575	Paramormyrops_kingsleyae
ENSEBUG00000013453	-	99	51.185	ENSPMGG00000014627	polrmt	77	51.185	Periophthalmus_magnuspinnatus
ENSEBUG00000013453	-	91	59.011	ENSPEMG00000011671	Polrmt	75	59.011	Peromyscus_maniculatus_bairdii
ENSEBUG00000013453	-	83	52.302	ENSPMAG00000005070	-	89	52.302	Petromyzon_marinus
ENSEBUG00000013453	-	99	51.606	ENSPCIG00000006103	POLRMT	75	51.606	Phascolarctos_cinereus
ENSEBUG00000013453	-	99	52.253	ENSPFOG00000003911	polrmt	76	49.235	Poecilia_formosa
ENSEBUG00000013453	-	84	50.702	ENSPLAG00000005743	polrmt	68	50.702	Poecilia_latipinna
ENSEBUG00000013453	-	99	51.505	ENSPMEG00000008947	polrmt	75	51.505	Poecilia_mexicana
ENSEBUG00000013453	-	68	43.457	ENSPMEG00000011484	polrmt	66	43.457	Poecilia_mexicana
ENSEBUG00000013453	-	99	51.717	ENSPREG00000007650	polrmt	70	51.717	Poecilia_reticulata
ENSEBUG00000013453	-	91	59.494	ENSPPYG00000009282	POLRMT	72	59.494	Pongo_abelii
ENSEBUG00000013453	-	93	58.140	ENSPCAG00000010816	POLRMT	68	58.140	Procavia_capensis
ENSEBUG00000013453	-	99	47.441	ENSPCOG00000014539	POLRMT	74	47.441	Propithecus_coquereli
ENSEBUG00000013453	-	99	48.232	ENSPVAG00000008403	POLRMT	75	48.232	Pteropus_vampyrus
ENSEBUG00000013453	-	99	52.146	ENSPNYG00000020790	polrmt	69	52.146	Pundamilia_nyererei
ENSEBUG00000013453	-	99	54.721	ENSPNAG00000019790	polrmt	71	55.343	Pygocentrus_nattereri
ENSEBUG00000013453	-	99	49.623	ENSRNOG00000024879	Polrmt	76	49.623	Rattus_norvegicus
ENSEBUG00000013453	-	99	49.462	ENSRBIG00000006728	POLRMT	75	49.462	Rhinopithecus_bieti
ENSEBUG00000013453	-	99	49.409	ENSRROG00000040809	POLRMT	75	49.409	Rhinopithecus_roxellana
ENSEBUG00000013453	-	72	36.467	YFL036W	-	50	36.984	Saccharomyces_cerevisiae
ENSEBUG00000013453	-	99	49.032	ENSSBOG00000025388	POLRMT	74	49.032	Saimiri_boliviensis_boliviensis
ENSEBUG00000013453	-	87	52.328	ENSSHAG00000009387	-	100	52.328	Sarcophilus_harrisii
ENSEBUG00000013453	-	99	53.061	ENSSFOG00015005074	polrmt	75	53.061	Scleropages_formosus
ENSEBUG00000013453	-	99	53.175	ENSSMAG00000011851	polrmt	69	53.175	Scophthalmus_maximus
ENSEBUG00000013453	-	99	52.960	ENSSDUG00000004410	polrmt	74	52.319	Seriola_dumerili
ENSEBUG00000013453	-	99	53.175	ENSSLDG00000010643	polrmt	74	52.535	Seriola_lalandi_dorsalis
ENSEBUG00000013453	-	99	53.821	ENSSPAG00000018740	polrmt	71	53.821	Stegastes_partitus
ENSEBUG00000013453	-	99	49.575	ENSSSCG00000035693	POLRMT	76	49.575	Sus_scrofa
ENSEBUG00000013453	-	99	49.678	ENSTGUG00000000621	POLRMT	94	49.785	Taeniopygia_guttata
ENSEBUG00000013453	-	99	52.263	ENSTRUG00000018040	polrmt	73	52.815	Takifugu_rubripes
ENSEBUG00000013453	-	99	53.441	ENSTNIG00000010642	polrmt	91	53.441	Tetraodon_nigroviridis
ENSEBUG00000013453	-	53	48.560	ENSTBEG00000001819	-	74	48.750	Tupaia_belangeri
ENSEBUG00000013453	-	78	60.557	ENSTTRG00000011329	POLRMT	59	60.557	Tursiops_truncatus
ENSEBUG00000013453	-	99	49.462	ENSUAMG00000019616	POLRMT	75	49.570	Ursus_americanus
ENSEBUG00000013453	-	99	46.688	ENSVVUG00000022627	POLRMT	76	46.793	Vulpes_vulpes
ENSEBUG00000013453	-	99	51.496	ENSXETG00000006545	polrmt	75	51.496	Xenopus_tropicalis
ENSEBUG00000013453	-	99	52.361	ENSXMAG00000012464	polrmt	72	52.731	Xiphophorus_maculatus