EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000013461 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 46752 bases
Position: chrFYBX02009537.1:2689364-2736115
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000021841	Suf	PF05843.14	6.6e-08	1	1
ENSEBUP00000021841	HAT	PF02184.16	2.5e-26	1	2
ENSEBUP00000021841	HAT	PF02184.16	2.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022417	-	1788	-	ENSEBUP00000021841	595 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013461	crnkl1	96	57.833	ENSG00000101343	CRNKL1	99	60.558	Homo_sapiens
ENSEBUG00000013461	crnkl1	95	58.407	ENSAPOG00000009705	crnkl1	99	59.406	Acanthochromis_polyacanthus
ENSEBUG00000013461	crnkl1	95	58.616	ENSAMEG00000000270	CRNKL1	82	61.155	Ailuropoda_melanoleuca
ENSEBUG00000013461	crnkl1	95	56.554	ENSACIG00000015267	crnkl1	90	61.290	Amphilophus_citrinellus
ENSEBUG00000013461	crnkl1	95	58.555	ENSAOCG00000021964	crnkl1	90	61.616	Amphiprion_ocellaris
ENSEBUG00000013461	crnkl1	95	58.555	ENSAPEG00000015041	crnkl1	90	61.616	Amphiprion_percula
ENSEBUG00000013461	crnkl1	96	58.297	ENSATEG00000001068	crnkl1	89	61.044	Anabas_testudineus
ENSEBUG00000013461	crnkl1	94	59.761	ENSAPLG00000013105	CRNKL1	97	59.761	Anas_platyrhynchos
ENSEBUG00000013461	crnkl1	97	56.686	ENSACAG00000005284	CRNKL1	99	61.386	Anolis_carolinensis
ENSEBUG00000013461	crnkl1	87	57.460	ENSANAG00000024889	CRNKL1	99	57.557	Aotus_nancymaae
ENSEBUG00000013461	crnkl1	97	56.667	ENSACLG00000010813	crnkl1	91	61.933	Astatotilapia_calliptera
ENSEBUG00000013461	crnkl1	93	58.859	ENSAMXG00000018334	crnkl1	91	61.523	Astyanax_mexicanus
ENSEBUG00000013461	crnkl1	97	58.224	ENSBTAG00000008472	CRNKL1	98	60.870	Bos_taurus
ENSEBUG00000013461	crnkl1	89	47.040	WBGene00019762	M03F8.3	90	49.902	Caenorhabditis_elegans
ENSEBUG00000013461	crnkl1	96	58.126	ENSCJAG00000005393	CRNKL1	99	58.396	Callithrix_jacchus
ENSEBUG00000013461	crnkl1	96	58.590	ENSCAFG00000005333	CRNKL1	94	61.111	Canis_familiaris
ENSEBUG00000013461	crnkl1	96	58.394	ENSCAFG00020027488	CRNKL1	99	61.111	Canis_lupus_dingo
ENSEBUG00000013461	crnkl1	97	58.055	ENSCHIG00000013171	CRNKL1	98	60.277	Capra_hircus
ENSEBUG00000013461	crnkl1	96	57.980	ENSTSYG00000004197	CRNKL1	99	59.438	Carlito_syrichta
ENSEBUG00000013461	crnkl1	86	59.921	ENSCAPG00000010501	CRNKL1	99	59.921	Cavia_aperea
ENSEBUG00000013461	crnkl1	96	54.612	ENSCPOG00000004418	CRNKL1	99	60.159	Cavia_porcellus
ENSEBUG00000013461	crnkl1	96	58.272	ENSCCAG00000027037	CRNKL1	99	58.582	Cebus_capucinus
ENSEBUG00000013461	crnkl1	96	57.833	ENSCATG00000034247	CRNKL1	99	58.022	Cercocebus_atys
ENSEBUG00000013461	crnkl1	96	56.223	ENSCLAG00000013859	CRNKL1	99	60.757	Chinchilla_lanigera
ENSEBUG00000013461	crnkl1	96	57.833	ENSCSAG00000011434	CRNKL1	99	58.022	Chlorocebus_sabaeus
ENSEBUG00000013461	crnkl1	95	58.174	ENSCHOG00000006371	CRNKL1	83	60.757	Choloepus_hoffmanni
ENSEBUG00000013461	crnkl1	96	54.307	ENSCPBG00000023501	CRNKL1	99	61.155	Chrysemys_picta_bellii
ENSEBUG00000013461	crnkl1	93	50.528	ENSCING00000002709	-	99	52.104	Ciona_intestinalis
ENSEBUG00000013461	crnkl1	96	57.833	ENSCANG00000038789	CRNKL1	99	58.022	Colobus_angolensis_palliatus
ENSEBUG00000013461	crnkl1	96	58.272	ENSCGRG00001001115	-	99	60.956	Cricetulus_griseus_chok1gshd
ENSEBUG00000013461	crnkl1	96	58.272	ENSCGRG00001000687	-	99	60.956	Cricetulus_griseus_chok1gshd
ENSEBUG00000013461	crnkl1	96	58.272	ENSCGRG00000007854	Crnkl1	99	60.956	Cricetulus_griseus_crigri
ENSEBUG00000013461	crnkl1	94	57.036	ENSCSEG00000005594	crnkl1	88	59.188	Cynoglossus_semilaevis
ENSEBUG00000013461	crnkl1	94	58.982	ENSCVAG00000015172	crnkl1	90	62.500	Cyprinodon_variegatus
ENSEBUG00000013461	crnkl1	93	57.831	ENSDARG00000007901	crnkl1	91	57.678	Danio_rerio
ENSEBUG00000013461	crnkl1	96	58.272	ENSDNOG00000016226	CRNKL1	94	58.582	Dasypus_novemcinctus
ENSEBUG00000013461	crnkl1	94	54.086	ENSDORG00000030174	-	99	57.143	Dipodomys_ordii
ENSEBUG00000013461	crnkl1	94	55.291	ENSDORG00000023724	-	99	58.163	Dipodomys_ordii
ENSEBUG00000013461	crnkl1	96	56.023	ENSDORG00000000394	-	99	59.600	Dipodomys_ordii
ENSEBUG00000013461	crnkl1	94	47.788	FBgn0000377	crn	98	48.828	Drosophila_melanogaster
ENSEBUG00000013461	crnkl1	93	52.324	ENSETEG00000003711	CRNKL1	81	52.479	Echinops_telfairi
ENSEBUG00000013461	crnkl1	96	58.419	ENSEASG00005002072	CRNKL1	99	61.155	Equus_asinus_asinus
ENSEBUG00000013461	crnkl1	96	58.419	ENSECAG00000022215	CRNKL1	99	61.155	Equus_caballus
ENSEBUG00000013461	crnkl1	95	55.817	ENSEEUG00000000413	CRNKL1	91	57.371	Erinaceus_europaeus
ENSEBUG00000013461	crnkl1	94	58.234	ENSELUG00000015424	crnkl1	96	60.563	Esox_lucius
ENSEBUG00000013461	crnkl1	96	58.419	ENSFCAG00000000714	CRNKL1	99	61.155	Felis_catus
ENSEBUG00000013461	crnkl1	83	59.960	ENSFALG00000004611	CRNKL1	99	59.960	Ficedula_albicollis
ENSEBUG00000013461	crnkl1	96	56.076	ENSFDAG00000000604	CRNKL1	99	60.558	Fukomys_damarensis
ENSEBUG00000013461	crnkl1	94	58.122	ENSFHEG00000013163	crnkl1	87	63.320	Fundulus_heteroclitus
ENSEBUG00000013461	crnkl1	94	62.963	ENSGMOG00000007609	crnkl1	94	62.000	Gadus_morhua
ENSEBUG00000013461	crnkl1	96	55.182	ENSGALG00000008429	CRNKL1	99	59.363	Gallus_gallus
ENSEBUG00000013461	crnkl1	94	59.016	ENSGAFG00000014249	crnkl1	89	61.924	Gambusia_affinis
ENSEBUG00000013461	crnkl1	98	54.663	ENSGACG00000011852	crnkl1	92	59.339	Gasterosteus_aculeatus
ENSEBUG00000013461	crnkl1	88	61.155	ENSGAGG00000021233	CRNKL1	99	61.155	Gopherus_agassizii
ENSEBUG00000013461	crnkl1	96	57.833	ENSGGOG00000014176	CRNKL1	99	60.558	Gorilla_gorilla
ENSEBUG00000013461	crnkl1	97	56.812	ENSHBUG00000005246	crnkl1	91	62.130	Haplochromis_burtoni
ENSEBUG00000013461	crnkl1	96	55.930	ENSHGLG00000010856	CRNKL1	99	60.359	Heterocephalus_glaber_female
ENSEBUG00000013461	crnkl1	96	55.930	ENSHGLG00100011521	CRNKL1	99	60.359	Heterocephalus_glaber_male
ENSEBUG00000013461	crnkl1	94	59.909	ENSHCOG00000006420	crnkl1	98	57.840	Hippocampus_comes
ENSEBUG00000013461	crnkl1	88	51.946	ENSIPUG00000000315	-	100	50.847	Ictalurus_punctatus
ENSEBUG00000013461	crnkl1	93	53.077	ENSIPUG00000006836	-	98	55.556	Ictalurus_punctatus
ENSEBUG00000013461	crnkl1	90	62.319	ENSIPUG00000006751	crnkl1	90	62.346	Ictalurus_punctatus
ENSEBUG00000013461	crnkl1	96	56.515	ENSSTOG00000014747	CRNKL1	99	61.155	Ictidomys_tridecemlineatus
ENSEBUG00000013461	crnkl1	96	55.301	ENSJJAG00000016926	Crnkl1	99	59.381	Jaculus_jaculus
ENSEBUG00000013461	crnkl1	97	56.686	ENSKMAG00000003620	crnkl1	88	61.584	Kryptolebias_marmoratus
ENSEBUG00000013461	crnkl1	94	59.180	ENSLBEG00000003543	crnkl1	63	44.422	Labrus_bergylta
ENSEBUG00000013461	crnkl1	95	56.444	ENSLACG00000001129	CRNKL1	99	62.195	Latimeria_chalumnae
ENSEBUG00000013461	crnkl1	93	59.009	ENSLOCG00000016889	crnkl1	94	62.500	Lepisosteus_oculatus
ENSEBUG00000013461	crnkl1	96	57.456	ENSLAFG00000004512	CRNKL1	99	60.956	Loxodonta_africana
ENSEBUG00000013461	crnkl1	96	57.833	ENSMFAG00000039893	CRNKL1	99	58.022	Macaca_fascicularis
ENSEBUG00000013461	crnkl1	96	57.833	ENSMMUG00000007709	CRNKL1	99	58.022	Macaca_mulatta
ENSEBUG00000013461	crnkl1	96	57.833	ENSMNEG00000037490	CRNKL1	99	58.022	Macaca_nemestrina
ENSEBUG00000013461	crnkl1	96	57.833	ENSMLEG00000034885	CRNKL1	99	58.022	Mandrillus_leucophaeus
ENSEBUG00000013461	crnkl1	97	56.395	ENSMAMG00000008757	crnkl1	91	61.188	Mastacembelus_armatus
ENSEBUG00000013461	crnkl1	97	56.667	ENSMZEG00005022345	crnkl1	92	61.933	Maylandia_zebra
ENSEBUG00000013461	crnkl1	96	58.964	ENSMGAG00000003452	CRNKL1	94	58.964	Meleagris_gallopavo
ENSEBUG00000013461	crnkl1	96	58.272	ENSMAUG00000020764	Crnkl1	99	60.956	Mesocricetus_auratus
ENSEBUG00000013461	crnkl1	96	57.833	ENSMICG00000006048	CRNKL1	99	58.022	Microcebus_murinus
ENSEBUG00000013461	crnkl1	93	45.925	ENSMOCG00000004179	-	95	45.879	Microtus_ochrogaster
ENSEBUG00000013461	crnkl1	96	50.898	ENSMOCG00000000681	-	99	59.454	Microtus_ochrogaster
ENSEBUG00000013461	crnkl1	88	57.437	ENSMMOG00000017601	crnkl1	97	57.667	Mola_mola
ENSEBUG00000013461	crnkl1	96	56.440	ENSMODG00000005961	-	67	59.880	Monodelphis_domestica
ENSEBUG00000013461	crnkl1	92	57.208	ENSMODG00000010857	-	95	57.885	Monodelphis_domestica
ENSEBUG00000013461	crnkl1	97	71.803	ENSMALG00000011211	crnkl1	90	71.803	Monopterus_albus
ENSEBUG00000013461	crnkl1	96	58.272	MGP_CAROLIEiJ_G0024394	Crnkl1	99	60.956	Mus_caroli
ENSEBUG00000013461	crnkl1	96	58.419	ENSMUSG00000001767	Crnkl1	99	61.155	Mus_musculus
ENSEBUG00000013461	crnkl1	96	58.272	MGP_PahariEiJ_G0025838	Crnkl1	99	58.396	Mus_pahari
ENSEBUG00000013461	crnkl1	96	58.419	MGP_SPRETEiJ_G0025312	Crnkl1	99	61.155	Mus_spretus
ENSEBUG00000013461	crnkl1	96	58.419	ENSMPUG00000001226	CRNKL1	99	58.769	Mustela_putorius_furo
ENSEBUG00000013461	crnkl1	95	55.670	ENSMLUG00000016513	CRNKL1	88	60.956	Myotis_lucifugus
ENSEBUG00000013461	crnkl1	96	53.736	ENSNGAG00000023097	Crnkl1	99	59.339	Nannospalax_galili
ENSEBUG00000013461	crnkl1	97	57.101	ENSNBRG00000007867	crnkl1	91	61.933	Neolamprologus_brichardi
ENSEBUG00000013461	crnkl1	96	56.029	ENSNLEG00000009862	CRNKL1	99	57.171	Nomascus_leucogenys
ENSEBUG00000013461	crnkl1	94	58.060	ENSMEUG00000012167	-	99	59.351	Notamacropus_eugenii
ENSEBUG00000013461	crnkl1	96	55.556	ENSMEUG00000002361	-	99	55.680	Notamacropus_eugenii
ENSEBUG00000013461	crnkl1	80	42.775	ENSOPRG00000009242	-	62	42.775	Ochotona_princeps
ENSEBUG00000013461	crnkl1	96	55.783	ENSODEG00000012175	CRNKL1	99	60.159	Octodon_degus
ENSEBUG00000013461	crnkl1	97	56.957	ENSONIG00000018728	crnkl1	91	61.736	Oreochromis_niloticus
ENSEBUG00000013461	crnkl1	93	57.553	ENSOCUG00000015484	CRNKL1	82	60.956	Oryctolagus_cuniculus
ENSEBUG00000013461	crnkl1	94	60.489	ENSORLG00000017240	crnkl1	94	60.489	Oryzias_latipes
ENSEBUG00000013461	crnkl1	94	56.737	ENSORLG00020001742	crnkl1	89	63.918	Oryzias_latipes_hni
ENSEBUG00000013461	crnkl1	94	56.886	ENSORLG00015019564	crnkl1	89	64.124	Oryzias_latipes_hsok
ENSEBUG00000013461	crnkl1	94	57.485	ENSOMEG00000019895	crnkl1	89	63.786	Oryzias_melastigma
ENSEBUG00000013461	crnkl1	96	57.956	ENSOGAG00000011544	CRNKL1	99	58.178	Otolemur_garnettii
ENSEBUG00000013461	crnkl1	96	58.419	ENSOARG00000002150	CRNKL1	89	60.870	Ovis_aries
ENSEBUG00000013461	crnkl1	95	58.580	ENSPPAG00000027847	CRNKL1	82	60.159	Pan_paniscus
ENSEBUG00000013461	crnkl1	96	58.419	ENSPPRG00000001955	CRNKL1	99	61.155	Panthera_pardus
ENSEBUG00000013461	crnkl1	96	58.419	ENSPTIG00000007393	CRNKL1	99	61.155	Panthera_tigris_altaica
ENSEBUG00000013461	crnkl1	96	57.833	ENSPTRG00000030609	CRNKL1	99	60.558	Pan_troglodytes
ENSEBUG00000013461	crnkl1	96	57.833	ENSPANG00000017420	CRNKL1	99	58.022	Papio_anubis
ENSEBUG00000013461	crnkl1	93	55.405	ENSPKIG00000017093	crnkl1	88	57.374	Paramormyrops_kingsleyae
ENSEBUG00000013461	crnkl1	96	54.692	ENSPSIG00000012705	CRNKL1	99	61.155	Pelodiscus_sinensis
ENSEBUG00000013461	crnkl1	95	58.942	ENSPMGG00000006263	crnkl1	95	55.804	Periophthalmus_magnuspinnatus
ENSEBUG00000013461	crnkl1	97	57.742	ENSPEMG00000000073	-	99	60.196	Peromyscus_maniculatus_bairdii
ENSEBUG00000013461	crnkl1	97	56.749	ENSPMAG00000002250	crnkl1	99	63.250	Petromyzon_marinus
ENSEBUG00000013461	crnkl1	96	59.498	ENSPCIG00000025825	CRNKL1	95	59.880	Phascolarctos_cinereus
ENSEBUG00000013461	crnkl1	94	57.228	ENSPFOG00000005102	crnkl1	92	61.924	Poecilia_formosa
ENSEBUG00000013461	crnkl1	94	57.228	ENSPLAG00000007288	crnkl1	87	62.705	Poecilia_latipinna
ENSEBUG00000013461	crnkl1	94	57.377	ENSPMEG00000008865	crnkl1	93	62.124	Poecilia_mexicana
ENSEBUG00000013461	crnkl1	94	57.186	ENSPREG00000012615	crnkl1	90	62.680	Poecilia_reticulata
ENSEBUG00000013461	crnkl1	95	58.027	ENSPPYG00000010747	CRNKL1	80	58.022	Pongo_abelii
ENSEBUG00000013461	crnkl1	93	54.299	ENSPCAG00000003296	CRNKL1	83	55.761	Procavia_capensis
ENSEBUG00000013461	crnkl1	95	57.732	ENSPCOG00000017608	CRNKL1	82	59.000	Propithecus_coquereli
ENSEBUG00000013461	crnkl1	95	58.468	ENSPVAG00000006207	CRNKL1	83	60.956	Pteropus_vampyrus
ENSEBUG00000013461	crnkl1	97	55.797	ENSPNYG00000001977	crnkl1	91	62.130	Pundamilia_nyererei
ENSEBUG00000013461	crnkl1	96	58.358	ENSPNAG00000001507	crnkl1	98	56.972	Pygocentrus_nattereri
ENSEBUG00000013461	crnkl1	96	58.419	ENSRNOG00000010587	Crnkl1	99	61.155	Rattus_norvegicus
ENSEBUG00000013461	crnkl1	96	58.419	ENSRNOG00000040045	Crnkl1	99	61.155	Rattus_norvegicus
ENSEBUG00000013461	crnkl1	96	57.664	ENSRBIG00000031770	CRNKL1	99	57.807	Rhinopithecus_bieti
ENSEBUG00000013461	crnkl1	96	57.664	ENSRROG00000040450	CRNKL1	99	57.807	Rhinopithecus_roxellana
ENSEBUG00000013461	crnkl1	90	32.302	YLR117C	CLF1	99	32.336	Saccharomyces_cerevisiae
ENSEBUG00000013461	crnkl1	96	58.555	ENSSBOG00000029672	CRNKL1	99	58.364	Saimiri_boliviensis_boliviensis
ENSEBUG00000013461	crnkl1	92	48.939	ENSSHAG00000011199	CRNKL1	99	51.943	Sarcophilus_harrisii
ENSEBUG00000013461	crnkl1	93	58.886	ENSSFOG00015000946	crnkl1	87	62.140	Scleropages_formosus
ENSEBUG00000013461	crnkl1	96	55.556	ENSSMAG00000007933	crnkl1	91	59.459	Scophthalmus_maximus
ENSEBUG00000013461	crnkl1	95	50.837	ENSSDUG00000012625	crnkl1	86	53.680	Seriola_dumerili
ENSEBUG00000013461	crnkl1	95	56.973	ENSSLDG00000021413	crnkl1	87	61.711	Seriola_lalandi_dorsalis
ENSEBUG00000013461	crnkl1	96	58.443	ENSSARG00000006443	CRNKL1	81	59.309	Sorex_araneus
ENSEBUG00000013461	crnkl1	97	57.994	ENSSPUG00000005254	CRNKL1	99	60.594	Sphenodon_punctatus
ENSEBUG00000013461	crnkl1	94	57.335	ENSSPAG00000016150	crnkl1	86	62.474	Stegastes_partitus
ENSEBUG00000013461	crnkl1	96	58.358	ENSSSCG00000038587	CRNKL1	98	61.078	Sus_scrofa
ENSEBUG00000013461	crnkl1	96	60.558	ENSTGUG00000007645	CRNKL1	98	60.558	Taeniopygia_guttata
ENSEBUG00000013461	crnkl1	94	54.893	ENSTRUG00000015417	crnkl1	88	55.668	Takifugu_rubripes
ENSEBUG00000013461	crnkl1	94	60.825	ENSTNIG00000010710	crnkl1	97	60.825	Tetraodon_nigroviridis
ENSEBUG00000013461	crnkl1	87	59.688	ENSTBEG00000001304	CRNKL1	81	59.688	Tupaia_belangeri
ENSEBUG00000013461	crnkl1	87	57.668	ENSTTRG00000000484	CRNKL1	81	59.060	Tursiops_truncatus
ENSEBUG00000013461	crnkl1	96	58.419	ENSUAMG00000018586	CRNKL1	99	61.155	Ursus_americanus
ENSEBUG00000013461	crnkl1	96	58.419	ENSUMAG00000024957	CRNKL1	99	61.155	Ursus_maritimus
ENSEBUG00000013461	crnkl1	96	58.590	ENSVVUG00000012559	CRNKL1	82	61.111	Vulpes_vulpes
ENSEBUG00000013461	crnkl1	97	57.558	ENSXETG00000009698	crnkl1	99	60.990	Xenopus_tropicalis
ENSEBUG00000013461	crnkl1	94	58.420	ENSXCOG00000000824	crnkl1	90	62.295	Xiphophorus_couchianus
ENSEBUG00000013461	crnkl1	94	66.719	ENSXMAG00000006896	crnkl1	90	62.705	Xiphophorus_maculatus