EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000013506 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 31868 bases
Position: chrFYBX02000147.1:1539792-1571659
Accession: ZDB-GENE-030131-9345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000021887	RRS1	PF04939.12	7.6e-58	1	1
ENSEBUP00000021893	RRS1	PF04939.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022463	-	4987	-	ENSEBUP00000021887	296 (aa)	-	-
ENSEBUT00000022469	-	3012	-	ENSEBUP00000021893	376 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013506	rrs1	95	55.088	ENSG00000179041	RRS1	80	55.782	Homo_sapiens
ENSEBUG00000013506	rrs1	96	57.746	ENSATEG00000011743	rrs1	82	59.028	Anabas_testudineus
ENSEBUG00000013506	rrs1	95	55.789	ENSANAG00000018116	RRS1	80	56.463	Aotus_nancymaae
ENSEBUG00000013506	rrs1	96	57.394	ENSAMXG00000037893	rrs1	78	56.333	Astyanax_mexicanus
ENSEBUG00000013506	rrs1	95	54.035	ENSBTAG00000016716	RRS1	84	52.922	Bos_taurus
ENSEBUG00000013506	rrs1	90	43.885	WBGene00007617	rrbs-1	81	44.000	Caenorhabditis_elegans
ENSEBUG00000013506	rrs1	95	55.088	ENSCJAG00000022034	RRS1	84	54.045	Callithrix_jacchus
ENSEBUG00000013506	rrs1	95	55.052	ENSCAFG00000007313	RRS1	84	53.922	Canis_familiaris
ENSEBUG00000013506	rrs1	95	55.052	ENSCAFG00020020365	-	84	53.922	Canis_lupus_dingo
ENSEBUG00000013506	rrs1	95	55.052	ENSCAFG00020016049	-	84	53.922	Canis_lupus_dingo
ENSEBUG00000013506	rrs1	95	54.035	ENSCHIG00000009141	RRS1	80	54.762	Capra_hircus
ENSEBUG00000013506	rrs1	95	55.789	ENSCPOG00000000647	RRS1	81	57.192	Cavia_porcellus
ENSEBUG00000013506	rrs1	95	55.439	ENSCCAG00000032186	RRS1	84	54.045	Cebus_capucinus
ENSEBUG00000013506	rrs1	95	55.088	ENSCATG00000016944	RRS1	80	55.782	Cercocebus_atys
ENSEBUG00000013506	rrs1	95	54.737	ENSCSAG00000018552	RRS1	80	55.442	Chlorocebus_sabaeus
ENSEBUG00000013506	rrs1	95	55.439	ENSCHOG00000002455	RRS1	80	56.122	Choloepus_hoffmanni
ENSEBUG00000013506	rrs1	96	49.829	ENSCPBG00000021374	RRS1	88	49.196	Chrysemys_picta_bellii
ENSEBUG00000013506	rrs1	99	49.662	ENSCING00000002177	-	91	50.831	Ciona_intestinalis
ENSEBUG00000013506	rrs1	99	48.311	ENSCSAVG00000011819	-	92	50.820	Ciona_savignyi
ENSEBUG00000013506	rrs1	95	55.088	ENSCANG00000012718	RRS1	80	55.782	Colobus_angolensis_palliatus
ENSEBUG00000013506	rrs1	95	55.789	ENSCGRG00001015575	-	90	53.994	Cricetulus_griseus_chok1gshd
ENSEBUG00000013506	rrs1	95	56.140	ENSCGRG00001002391	-	81	56.419	Cricetulus_griseus_chok1gshd
ENSEBUG00000013506	rrs1	95	48.227	ENSCSEG00000014750	rrs1	78	48.443	Cynoglossus_semilaevis
ENSEBUG00000013506	rrs1	96	48.772	ENSCVAG00000017878	rrs1	80	48.772	Cyprinodon_variegatus
ENSEBUG00000013506	rrs1	96	59.298	ENSDARG00000003941	rrs1	83	60.417	Danio_rerio
ENSEBUG00000013506	rrs1	95	54.035	ENSDNOG00000017900	RRS1	83	53.074	Dasypus_novemcinctus
ENSEBUG00000013506	rrs1	64	57.292	ENSDORG00000026331	Rrs1	88	55.172	Dipodomys_ordii
ENSEBUG00000013506	rrs1	89	44.364	FBgn0052409	CG32409	91	43.344	Drosophila_melanogaster
ENSEBUG00000013506	rrs1	95	54.737	ENSEASG00005001691	RRS1	80	55.442	Equus_asinus_asinus
ENSEBUG00000013506	rrs1	95	54.737	ENSECAG00000004492	RRS1	87	54.949	Equus_caballus
ENSEBUG00000013506	rrs1	95	54.386	ENSEEUG00000013719	RRS1	80	55.442	Erinaceus_europaeus
ENSEBUG00000013506	rrs1	95	55.245	ENSFCAG00000014332	RRS1	84	53.896	Felis_catus
ENSEBUG00000013506	rrs1	96	49.660	ENSGALG00000030890	RRS1	86	50.489	Gallus_gallus
ENSEBUG00000013506	rrs1	98	54.608	ENSGACG00000002969	rrs1	83	55.593	Gasterosteus_aculeatus
ENSEBUG00000013506	rrs1	96	49.658	ENSGAGG00000023718	RRS1	81	51.020	Gopherus_agassizii
ENSEBUG00000013506	rrs1	95	55.088	ENSGGOG00000026663	RRS1	80	55.782	Gorilla_gorilla
ENSEBUG00000013506	rrs1	95	55.439	ENSHGLG00000021423	RRS1	84	54.369	Heterocephalus_glaber_female
ENSEBUG00000013506	rrs1	95	55.439	ENSHGLG00100020640	RRS1	84	54.369	Heterocephalus_glaber_male
ENSEBUG00000013506	rrs1	96	57.785	ENSHCOG00000015358	rrs1	86	55.161	Hippocampus_comes
ENSEBUG00000013506	rrs1	96	57.193	ENSIPUG00000014412	rrs1	86	56.376	Ictalurus_punctatus
ENSEBUG00000013506	rrs1	95	55.439	ENSSTOG00000026310	RRS1	86	53.016	Ictidomys_tridecemlineatus
ENSEBUG00000013506	rrs1	96	54.895	ENSJJAG00000011507	-	85	54.167	Jaculus_jaculus
ENSEBUG00000013506	rrs1	92	50.545	ENSJJAG00000020395	-	84	48.136	Jaculus_jaculus
ENSEBUG00000013506	rrs1	96	54.035	ENSKMAG00000008238	rrs1	92	51.757	Kryptolebias_marmoratus
ENSEBUG00000013506	rrs1	96	55.789	ENSLACG00000004058	RRS1	94	55.844	Latimeria_chalumnae
ENSEBUG00000013506	rrs1	99	55.102	ENSLOCG00000017812	rrs1	84	57.639	Lepisosteus_oculatus
ENSEBUG00000013506	rrs1	95	54.737	ENSLAFG00000015405	RRS1	79	55.782	Loxodonta_africana
ENSEBUG00000013506	rrs1	95	55.088	ENSMFAG00000042747	RRS1	80	55.782	Macaca_fascicularis
ENSEBUG00000013506	rrs1	95	55.088	ENSMMUG00000000886	RRS1	80	55.782	Macaca_mulatta
ENSEBUG00000013506	rrs1	95	55.088	ENSMNEG00000011696	RRS1	80	55.782	Macaca_nemestrina
ENSEBUG00000013506	rrs1	95	55.088	ENSMLEG00000004794	RRS1	80	55.782	Mandrillus_leucophaeus
ENSEBUG00000013506	rrs1	96	56.338	ENSMZEG00005004349	RRS1	83	56.463	Maylandia_zebra
ENSEBUG00000013506	rrs1	95	55.439	ENSMAUG00000005392	Rrs1	80	56.463	Mesocricetus_auratus
ENSEBUG00000013506	rrs1	96	55.556	ENSMOCG00000015862	Rrs1	81	53.651	Microtus_ochrogaster
ENSEBUG00000013506	rrs1	96	56.446	ENSMODG00000024952	RRS1	78	56.842	Monodelphis_domestica
ENSEBUG00000013506	rrs1	96	54.861	MGP_CAROLIEiJ_G0013936	Rrs1	81	56.122	Mus_caroli
ENSEBUG00000013506	rrs1	96	54.861	ENSMUSG00000061024	Rrs1	80	56.122	Mus_musculus
ENSEBUG00000013506	rrs1	96	53.472	MGP_PahariEiJ_G0023883	Rrs1	80	54.422	Mus_pahari
ENSEBUG00000013506	rrs1	96	54.861	MGP_SPRETEiJ_G0014739	Rrs1	80	56.122	Mus_spretus
ENSEBUG00000013506	rrs1	95	55.088	ENSMPUG00000018626	RRS1	84	53.333	Mustela_putorius_furo
ENSEBUG00000013506	rrs1	95	55.789	ENSNGAG00000012904	Rrs1	86	54.114	Nannospalax_galili
ENSEBUG00000013506	rrs1	73	55.760	ENSNLEG00000027730	RRS1	80	55.328	Nomascus_leucogenys
ENSEBUG00000013506	rrs1	95	56.738	ENSONIG00000014187	rrs1	84	56.250	Oreochromis_niloticus
ENSEBUG00000013506	rrs1	96	50.859	ENSOANG00000012348	RRS1	78	50.342	Ornithorhynchus_anatinus
ENSEBUG00000013506	rrs1	95	55.439	ENSOCUG00000013490	RRS1	79	56.463	Oryctolagus_cuniculus
ENSEBUG00000013506	rrs1	96	46.316	ENSOMEG00000008525	rrs1	87	45.631	Oryzias_melastigma
ENSEBUG00000013506	rrs1	95	54.737	ENSOGAG00000001085	RRS1	84	53.896	Otolemur_garnettii
ENSEBUG00000013506	rrs1	95	50.877	ENSOARG00000017417	RRS1	82	49.838	Ovis_aries
ENSEBUG00000013506	rrs1	95	55.088	ENSPPAG00000024378	RRS1	80	55.782	Pan_paniscus
ENSEBUG00000013506	rrs1	95	54.737	ENSPPRG00000021408	RRS1	80	55.782	Panthera_pardus
ENSEBUG00000013506	rrs1	95	54.737	ENSPTRG00000030988	RRS1	80	55.442	Pan_troglodytes
ENSEBUG00000013506	rrs1	94	40.143	ENSPANG00000035974	RRS1	76	41.176	Papio_anubis
ENSEBUG00000013506	rrs1	96	57.193	ENSPKIG00000007953	rrs1	84	58.333	Paramormyrops_kingsleyae
ENSEBUG00000013506	rrs1	95	55.088	ENSPEMG00000014427	Rrs1	84	54.045	Peromyscus_maniculatus_bairdii
ENSEBUG00000013506	rrs1	96	59.298	ENSPMAG00000006513	rrs1	92	55.307	Petromyzon_marinus
ENSEBUG00000013506	rrs1	96	53.979	ENSPCIG00000026695	RRS1	83	54.849	Phascolarctos_cinereus
ENSEBUG00000013506	rrs1	96	58.596	ENSPFOG00000020722	rrs1	92	57.383	Poecilia_formosa
ENSEBUG00000013506	rrs1	96	47.368	ENSPREG00000019960	rrs1	87	45.659	Poecilia_reticulata
ENSEBUG00000013506	rrs1	95	55.088	ENSPPYG00000018637	RRS1	92	56.522	Pongo_abelii
ENSEBUG00000013506	rrs1	95	55.124	ENSPCAG00000009115	RRS1	80	55.822	Procavia_capensis
ENSEBUG00000013506	rrs1	96	58.451	ENSPNAG00000021707	rrs1	83	59.044	Pygocentrus_nattereri
ENSEBUG00000013506	rrs1	95	54.737	ENSRNOG00000007240	Rrs1	80	55.442	Rattus_norvegicus
ENSEBUG00000013506	rrs1	95	55.088	ENSRBIG00000009132	RRS1	80	55.782	Rhinopithecus_bieti
ENSEBUG00000013506	rrs1	95	55.088	ENSRROG00000013472	RRS1	80	55.782	Rhinopithecus_roxellana
ENSEBUG00000013506	rrs1	95	54.737	ENSSBOG00000012639	-	84	55.369	Saimiri_boliviensis_boliviensis
ENSEBUG00000013506	rrs1	95	54.737	ENSSBOG00000011006	-	88	53.674	Saimiri_boliviensis_boliviensis
ENSEBUG00000013506	rrs1	96	44.755	ENSSFOG00015015772	rrs1	82	45.918	Scleropages_formosus
ENSEBUG00000013506	rrs1	94	57.706	ENSSMAG00000015226	rrs1	80	57.093	Scophthalmus_maximus
ENSEBUG00000013506	rrs1	72	55.000	ENSSARG00000006976	RRS1	62	56.000	Sorex_araneus
ENSEBUG00000013506	rrs1	95	55.088	ENSSSCG00000006214	RRS1	80	55.782	Sus_scrofa
ENSEBUG00000013506	rrs1	89	57.519	ENSTRUG00000008796	rrs1	93	55.229	Takifugu_rubripes
ENSEBUG00000013506	rrs1	89	58.491	ENSTNIG00000004026	rrs1	90	56.579	Tetraodon_nigroviridis
ENSEBUG00000013506	rrs1	95	54.737	ENSTBEG00000014752	RRS1	80	55.442	Tupaia_belangeri
ENSEBUG00000013506	rrs1	95	54.737	ENSUAMG00000008502	RRS1	84	53.571	Ursus_americanus
ENSEBUG00000013506	rrs1	95	54.704	ENSVVUG00000018452	RRS1	84	53.595	Vulpes_vulpes
ENSEBUG00000013506	rrs1	96	58.947	ENSXCOG00000009809	rrs1	84	57.718	Xiphophorus_couchianus