EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000013559 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3 (1 of many)
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 135922 bases
Position: chrFYBX02009499.1:177871-313792
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000021967	Fox-1_C	PF12414.8	2.7e-24	1	1
ENSEBUP00000021967	RRM_1	PF00076.22	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022542	RBFOX3 (1 of many)-201	1187	-	ENSEBUP00000021967	329 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000013559	RBFOX3	88	57.188	ENSEBUG00000002129	RBFOX3	82	60.900

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013559	RBFOX3	71	63.281	ENSG00000167281	RBFOX3	85	61.818	Homo_sapiens
ENSEBUG00000013559	RBFOX3	57	55.450	ENSAPOG00000015658	-	63	56.808	Acanthochromis_polyacanthus
ENSEBUG00000013559	RBFOX3	88	53.651	ENSAPOG00000021630	rbfox3b	77	56.552	Acanthochromis_polyacanthus
ENSEBUG00000013559	RBFOX3	71	60.219	ENSAMEG00000014170	RBFOX3	77	57.508	Ailuropoda_melanoleuca
ENSEBUG00000013559	RBFOX3	73	53.191	ENSACIG00000003768	-	79	53.061	Amphilophus_citrinellus
ENSEBUG00000013559	RBFOX3	69	55.118	ENSACIG00000010817	rbfox3b	84	56.870	Amphilophus_citrinellus
ENSEBUG00000013559	RBFOX3	71	62.548	ENSAOCG00000010786	-	73	60.137	Amphiprion_ocellaris
ENSEBUG00000013559	RBFOX3	88	53.651	ENSAOCG00000012358	rbfox3b	77	56.552	Amphiprion_ocellaris
ENSEBUG00000013559	RBFOX3	73	53.558	ENSAPEG00000019081	rbfox3b	73	53.992	Amphiprion_percula
ENSEBUG00000013559	RBFOX3	75	52.218	ENSAPEG00000015891	-	76	53.922	Amphiprion_percula
ENSEBUG00000013559	RBFOX3	71	58.238	ENSATEG00000023101	-	82	57.500	Anabas_testudineus
ENSEBUG00000013559	RBFOX3	69	55.118	ENSATEG00000019945	rbfox3b	73	56.705	Anabas_testudineus
ENSEBUG00000013559	RBFOX3	62	65.778	ENSACAG00000016093	RBFOX3	84	55.627	Anolis_carolinensis
ENSEBUG00000013559	RBFOX3	71	63.281	ENSANAG00000023457	RBFOX3	85	61.455	Aotus_nancymaae
ENSEBUG00000013559	RBFOX3	81	57.679	ENSACLG00000025552	-	82	53.091	Astatotilapia_calliptera
ENSEBUG00000013559	RBFOX3	88	54.167	ENSACLG00000020011	rbfox3b	85	58.696	Astatotilapia_calliptera
ENSEBUG00000013559	RBFOX3	83	55.892	ENSAMXG00000042841	rbfox3b	82	55.556	Astyanax_mexicanus
ENSEBUG00000013559	RBFOX3	71	61.154	ENSAMXG00000037246	rbfox3a	84	58.419	Astyanax_mexicanus
ENSEBUG00000013559	RBFOX3	62	68.000	ENSBTAG00000006280	RBFOX3	86	49.671	Bos_taurus
ENSEBUG00000013559	RBFOX3	63	61.739	ENSCJAG00000009563	RBFOX3	87	52.336	Callithrix_jacchus
ENSEBUG00000013559	RBFOX3	53	72.396	ENSCAFG00000005547	RBFOX3	68	72.396	Canis_familiaris
ENSEBUG00000013559	RBFOX3	71	52.145	ENSCAFG00020008126	RBFOX3	84	52.484	Canis_lupus_dingo
ENSEBUG00000013559	RBFOX3	62	55.147	ENSCHIG00000009124	RBFOX3	84	53.106	Capra_hircus
ENSEBUG00000013559	RBFOX3	71	52.649	ENSTSYG00000029617	RBFOX3	87	52.960	Carlito_syrichta
ENSEBUG00000013559	RBFOX3	71	51.815	ENSCPOG00000021703	RBFOX3	86	52.174	Cavia_porcellus
ENSEBUG00000013559	RBFOX3	71	63.281	ENSCCAG00000028450	RBFOX3	85	61.455	Cebus_capucinus
ENSEBUG00000013559	RBFOX3	71	63.281	ENSCATG00000018349	RBFOX3	85	61.818	Cercocebus_atys
ENSEBUG00000013559	RBFOX3	71	52.805	ENSCLAG00000006449	RBFOX3	87	53.106	Chinchilla_lanigera
ENSEBUG00000013559	RBFOX3	71	63.281	ENSCSAG00000002355	RBFOX3	85	61.818	Chlorocebus_sabaeus
ENSEBUG00000013559	RBFOX3	71	60.392	ENSCPBG00000010904	RBFOX3	85	59.489	Chrysemys_picta_bellii
ENSEBUG00000013559	RBFOX3	71	63.281	ENSCANG00000043120	RBFOX3	85	61.818	Colobus_angolensis_palliatus
ENSEBUG00000013559	RBFOX3	71	51.155	ENSCGRG00001019476	Rbfox3	86	51.553	Cricetulus_griseus_chok1gshd
ENSEBUG00000013559	RBFOX3	71	51.155	ENSCGRG00000003268	Rbfox3	86	51.553	Cricetulus_griseus_crigri
ENSEBUG00000013559	RBFOX3	63	59.740	ENSCSEG00000015567	RBFOX3	74	58.273	Cynoglossus_semilaevis
ENSEBUG00000013559	RBFOX3	81	50.000	ENSCSEG00000020606	RBFOX3	78	50.512	Cynoglossus_semilaevis
ENSEBUG00000013559	RBFOX3	88	53.651	ENSCVAG00000006882	rbfox3b	75	56.794	Cyprinodon_variegatus
ENSEBUG00000013559	RBFOX3	81	52.174	ENSDARG00000074310	rbfox3b	95	48.095	Danio_rerio
ENSEBUG00000013559	RBFOX3	71	60.769	ENSDARG00000010083	rbfox3a	85	58.076	Danio_rerio
ENSEBUG00000013559	RBFOX3	53	57.500	ENSDNOG00000039391	RBFOX3	65	56.275	Dasypus_novemcinctus
ENSEBUG00000013559	RBFOX3	71	46.454	ENSDORG00000005352	Rbfox3	85	47.176	Dipodomys_ordii
ENSEBUG00000013559	RBFOX3	71	63.672	ENSEASG00005005059	RBFOX3	84	61.818	Equus_asinus_asinus
ENSEBUG00000013559	RBFOX3	71	63.672	ENSECAG00000023811	RBFOX3	84	61.818	Equus_caballus
ENSEBUG00000013559	RBFOX3	88	54.341	ENSELUG00000017963	rbfox3b	88	54.167	Esox_lucius
ENSEBUG00000013559	RBFOX3	88	57.692	ENSFCAG00000002555	RBFOX3	85	61.091	Felis_catus
ENSEBUG00000013559	RBFOX3	71	47.917	ENSFALG00000012288	RBFOX3	77	47.222	Ficedula_albicollis
ENSEBUG00000013559	RBFOX3	71	47.195	ENSFDAG00000007489	RBFOX3	85	47.826	Fukomys_damarensis
ENSEBUG00000013559	RBFOX3	77	54.023	ENSFHEG00000008550	rbfox3b	84	54.475	Fundulus_heteroclitus
ENSEBUG00000013559	RBFOX3	71	61.569	ENSGALG00000032889	RBFOX3	82	58.086	Gallus_gallus
ENSEBUG00000013559	RBFOX3	84	52.475	ENSGAFG00000005025	rbfox3b	85	54.333	Gambusia_affinis
ENSEBUG00000013559	RBFOX3	71	46.732	ENSGACG00000002138	-	83	47.692	Gasterosteus_aculeatus
ENSEBUG00000013559	RBFOX3	71	60.392	ENSGAGG00000020025	RBFOX3	85	59.489	Gopherus_agassizii
ENSEBUG00000013559	RBFOX3	71	63.281	ENSGGOG00000012546	RBFOX3	85	61.818	Gorilla_gorilla
ENSEBUG00000013559	RBFOX3	81	57.966	ENSHBUG00000023098	-	81	58.020	Haplochromis_burtoni
ENSEBUG00000013559	RBFOX3	88	54.167	ENSHBUG00000018099	rbfox3b	75	57.639	Haplochromis_burtoni
ENSEBUG00000013559	RBFOX3	71	52.475	ENSHGLG00000008679	RBFOX3	86	52.795	Heterocephalus_glaber_female
ENSEBUG00000013559	RBFOX3	63	58.009	ENSHGLG00100014739	RBFOX3	84	57.252	Heterocephalus_glaber_male
ENSEBUG00000013559	RBFOX3	73	59.004	ENSHCOG00000007444	RBFOX3	59	63.478	Hippocampus_comes
ENSEBUG00000013559	RBFOX3	63	59.825	ENSHCOG00000001863	RBFOX3	76	58.065	Hippocampus_comes
ENSEBUG00000013559	RBFOX3	71	59.615	ENSIPUG00000012010	rbfox3a	84	57.045	Ictalurus_punctatus
ENSEBUG00000013559	RBFOX3	78	50.649	ENSIPUG00000021966	rbfox3b	97	55.636	Ictalurus_punctatus
ENSEBUG00000013559	RBFOX3	71	48.235	ENSSTOG00000026817	RBFOX3	84	47.810	Ictidomys_tridecemlineatus
ENSEBUG00000013559	RBFOX3	71	52.145	ENSJJAG00000014167	Rbfox3	87	52.484	Jaculus_jaculus
ENSEBUG00000013559	RBFOX3	88	53.651	ENSKMAG00000006726	rbfox3b	77	56.552	Kryptolebias_marmoratus
ENSEBUG00000013559	RBFOX3	81	56.122	ENSLBEG00000004030	rbfox3b	84	56.870	Labrus_bergylta
ENSEBUG00000013559	RBFOX3	71	62.162	ENSLBEG00000022508	-	83	55.229	Labrus_bergylta
ENSEBUG00000013559	RBFOX3	69	53.430	ENSLACG00000018409	-	76	52.273	Latimeria_chalumnae
ENSEBUG00000013559	RBFOX3	71	61.628	ENSLOCG00000012267	rbfox3a	84	59.170	Lepisosteus_oculatus
ENSEBUG00000013559	RBFOX3	71	57.042	ENSLAFG00000016623	RBFOX3	83	53.271	Loxodonta_africana
ENSEBUG00000013559	RBFOX3	71	52.787	ENSMFAG00000002247	RBFOX3	88	53.086	Macaca_fascicularis
ENSEBUG00000013559	RBFOX3	71	63.281	ENSMMUG00000023028	RBFOX3	85	61.818	Macaca_mulatta
ENSEBUG00000013559	RBFOX3	71	63.281	ENSMNEG00000041147	RBFOX3	85	61.818	Macaca_nemestrina
ENSEBUG00000013559	RBFOX3	71	63.281	ENSMLEG00000025686	RBFOX3	85	61.818	Mandrillus_leucophaeus
ENSEBUG00000013559	RBFOX3	69	54.435	ENSMAMG00000019810	rbfox3b	83	55.769	Mastacembelus_armatus
ENSEBUG00000013559	RBFOX3	63	60.086	ENSMAMG00000020600	-	77	57.401	Mastacembelus_armatus
ENSEBUG00000013559	RBFOX3	88	54.167	ENSMZEG00005000781	rbfox3b	77	57.388	Maylandia_zebra
ENSEBUG00000013559	RBFOX3	74	47.811	ENSMZEG00005003055	-	74	47.619	Maylandia_zebra
ENSEBUG00000013559	RBFOX3	53	57.868	ENSMGAG00000005600	RBFOX3	84	55.172	Meleagris_gallopavo
ENSEBUG00000013559	RBFOX3	71	50.825	ENSMAUG00000013543	Rbfox3	87	51.242	Mesocricetus_auratus
ENSEBUG00000013559	RBFOX3	77	61.091	ENSMICG00000014898	RBFOX3	73	68.000	Microcebus_murinus
ENSEBUG00000013559	RBFOX3	71	51.155	ENSMOCG00000015373	Rbfox3	87	51.553	Microtus_ochrogaster
ENSEBUG00000013559	RBFOX3	88	54.403	ENSMMOG00000020193	rbfox3b	80	57.432	Mola_mola
ENSEBUG00000013559	RBFOX3	88	57.827	ENSMODG00000002089	RBFOX3	84	58.147	Monodelphis_domestica
ENSEBUG00000013559	RBFOX3	88	53.968	ENSMALG00000020407	rbfox3b	77	56.207	Monopterus_albus
ENSEBUG00000013559	RBFOX3	88	56.329	ENSMALG00000018270	-	81	57.414	Monopterus_albus
ENSEBUG00000013559	RBFOX3	71	61.719	MGP_CAROLIEiJ_G0017487	Rbfox3	81	74.576	Mus_caroli
ENSEBUG00000013559	RBFOX3	71	61.328	ENSMUSG00000025576	Rbfox3	81	74.576	Mus_musculus
ENSEBUG00000013559	RBFOX3	71	62.109	MGP_PahariEiJ_G0018614	Rbfox3	81	75.424	Mus_pahari
ENSEBUG00000013559	RBFOX3	71	61.719	MGP_SPRETEiJ_G0018331	Rbfox3	81	74.576	Mus_spretus
ENSEBUG00000013559	RBFOX3	71	55.631	ENSMPUG00000012319	RBFOX3	82	53.846	Mustela_putorius_furo
ENSEBUG00000013559	RBFOX3	71	52.145	ENSNGAG00000018006	Rbfox3	87	52.484	Nannospalax_galili
ENSEBUG00000013559	RBFOX3	74	57.143	ENSNBRG00000022885	-	78	56.338	Neolamprologus_brichardi
ENSEBUG00000013559	RBFOX3	88	52.412	ENSNBRG00000010102	rbfox3b	75	56.944	Neolamprologus_brichardi
ENSEBUG00000013559	RBFOX3	71	63.672	ENSODEG00000009433	RBFOX3	85	62.182	Octodon_degus
ENSEBUG00000013559	RBFOX3	88	53.968	ENSONIG00000009549	rbfox3b	84	51.111	Oreochromis_niloticus
ENSEBUG00000013559	RBFOX3	80	58.276	ENSONIG00000007282	-	81	58.333	Oreochromis_niloticus
ENSEBUG00000013559	RBFOX3	53	49.580	ENSOCUG00000014217	RBFOX3	65	49.580	Oryctolagus_cuniculus
ENSEBUG00000013559	RBFOX3	81	56.552	ENSORLG00000000905	rbfox3b	61	56.552	Oryzias_latipes
ENSEBUG00000013559	RBFOX3	81	56.552	ENSORLG00020018030	rbfox3b	83	53.160	Oryzias_latipes_hni
ENSEBUG00000013559	RBFOX3	88	54.019	ENSORLG00015009200	rbfox3b	83	54.086	Oryzias_latipes_hsok
ENSEBUG00000013559	RBFOX3	74	51.064	ENSOMEG00000014677	rbfox3b	81	51.613	Oryzias_melastigma
ENSEBUG00000013559	RBFOX3	62	67.111	ENSOGAG00000029595	RBFOX3	72	61.011	Otolemur_garnettii
ENSEBUG00000013559	RBFOX3	53	52.535	ENSOARG00000002908	RBFOX3	56	55.505	Ovis_aries
ENSEBUG00000013559	RBFOX3	71	63.281	ENSPPAG00000025383	RBFOX3	93	61.818	Pan_paniscus
ENSEBUG00000013559	RBFOX3	71	53.741	ENSPPRG00000007819	RBFOX3	87	53.333	Panthera_pardus
ENSEBUG00000013559	RBFOX3	71	63.281	ENSPTRG00000009727	RBFOX3	85	61.818	Pan_troglodytes
ENSEBUG00000013559	RBFOX3	71	63.281	ENSPANG00000019837	RBFOX3	85	61.818	Papio_anubis
ENSEBUG00000013559	RBFOX3	71	60.853	ENSPKIG00000010299	rbfox3a	80	58.824	Paramormyrops_kingsleyae
ENSEBUG00000013559	RBFOX3	88	52.698	ENSPMGG00000008000	rbfox3b	92	54.747	Periophthalmus_magnuspinnatus
ENSEBUG00000013559	RBFOX3	71	51.815	ENSPEMG00000010500	Rbfox3	87	51.863	Peromyscus_maniculatus_bairdii
ENSEBUG00000013559	RBFOX3	88	54.576	ENSPCIG00000005766	RBFOX3	89	54.915	Phascolarctos_cinereus
ENSEBUG00000013559	RBFOX3	88	53.651	ENSPFOG00000018294	rbfox3b	73	56.794	Poecilia_formosa
ENSEBUG00000013559	RBFOX3	77	53.640	ENSPMEG00000022997	rbfox3b	84	54.086	Poecilia_mexicana
ENSEBUG00000013559	RBFOX3	88	54.206	ENSPREG00000012886	rbfox3b	88	54.890	Poecilia_reticulata
ENSEBUG00000013559	RBFOX3	71	57.422	ENSPPYG00000008704	RBFOX3	79	55.957	Pongo_abelii
ENSEBUG00000013559	RBFOX3	71	52.475	ENSPCAG00000001401	RBFOX3	87	53.125	Procavia_capensis
ENSEBUG00000013559	RBFOX3	77	51.242	ENSPCOG00000012689	RBFOX3	76	56.089	Propithecus_coquereli
ENSEBUG00000013559	RBFOX3	71	45.875	ENSPVAG00000015243	RBFOX3	86	46.273	Pteropus_vampyrus
ENSEBUG00000013559	RBFOX3	74	55.805	ENSPNYG00000009079	-	73	55.797	Pundamilia_nyererei
ENSEBUG00000013559	RBFOX3	73	53.817	ENSPNYG00000010414	rbfox3b	74	53.817	Pundamilia_nyererei
ENSEBUG00000013559	RBFOX3	69	51.528	ENSPNAG00000018173	rbfox3b	75	53.527	Pygocentrus_nattereri
ENSEBUG00000013559	RBFOX3	71	60.769	ENSPNAG00000002889	rbfox3a	76	57.823	Pygocentrus_nattereri
ENSEBUG00000013559	RBFOX3	71	62.109	ENSRNOG00000003386	Rbfox3	84	60.727	Rattus_norvegicus
ENSEBUG00000013559	RBFOX3	71	63.281	ENSRBIG00000040449	RBFOX3	84	57.325	Rhinopithecus_bieti
ENSEBUG00000013559	RBFOX3	71	63.281	ENSRROG00000000766	RBFOX3	85	61.818	Rhinopithecus_roxellana
ENSEBUG00000013559	RBFOX3	71	63.281	ENSSBOG00000031591	RBFOX3	85	61.455	Saimiri_boliviensis_boliviensis
ENSEBUG00000013559	RBFOX3	71	59.244	ENSSHAG00000016076	RBFOX3	83	58.594	Sarcophilus_harrisii
ENSEBUG00000013559	RBFOX3	71	60.853	ENSSFOG00015023260	rbfox3a	82	54.982	Scleropages_formosus
ENSEBUG00000013559	RBFOX3	71	52.308	ENSSFOG00015004716	RBFOX3	83	48.352	Scleropages_formosus
ENSEBUG00000013559	RBFOX3	80	53.618	ENSSMAG00000012618	rbfox3b	67	54.276	Scophthalmus_maximus
ENSEBUG00000013559	RBFOX3	81	57.093	ENSSMAG00000019052	-	85	58.029	Scophthalmus_maximus
ENSEBUG00000013559	RBFOX3	72	61.450	ENSSDUG00000015801	-	77	58.966	Seriola_dumerili
ENSEBUG00000013559	RBFOX3	77	54.023	ENSSDUG00000023183	rbfox3b	84	54.475	Seriola_dumerili
ENSEBUG00000013559	RBFOX3	88	57.239	ENSSLDG00000000149	rbfox3b	74	60.967	Seriola_lalandi_dorsalis
ENSEBUG00000013559	RBFOX3	77	56.115	ENSSLDG00000016098	-	76	57.706	Seriola_lalandi_dorsalis
ENSEBUG00000013559	RBFOX3	71	62.205	ENSSPUG00000011733	RBFOX3	85	60.219	Sphenodon_punctatus
ENSEBUG00000013559	RBFOX3	74	47.955	ENSSPAG00000017571	rbfox3b	74	49.819	Stegastes_partitus
ENSEBUG00000013559	RBFOX3	71	54.297	ENSSPAG00000004898	-	79	53.818	Stegastes_partitus
ENSEBUG00000013559	RBFOX3	61	68.018	ENSSSCG00000039498	RBFOX3	81	56.506	Sus_scrofa
ENSEBUG00000013559	RBFOX3	81	56.655	ENSTRUG00000004894	rbfox3b	79	56.655	Takifugu_rubripes
ENSEBUG00000013559	RBFOX3	81	50.000	ENSTNIG00000011278	rbfox3b	78	50.625	Tetraodon_nigroviridis
ENSEBUG00000013559	RBFOX3	62	53.875	ENSTTRG00000003676	RBFOX3	87	52.025	Tursiops_truncatus
ENSEBUG00000013559	RBFOX3	71	64.453	ENSUAMG00000004668	RBFOX3	85	62.909	Ursus_americanus
ENSEBUG00000013559	RBFOX3	88	57.325	ENSVVUG00000017864	RBFOX3	85	61.455	Vulpes_vulpes
ENSEBUG00000013559	RBFOX3	81	45.659	ENSXETG00000020236	rbfox3	76	45.659	Xenopus_tropicalis
ENSEBUG00000013559	RBFOX3	88	52.063	ENSXCOG00000018262	rbfox3b	85	56.107	Xiphophorus_couchianus
ENSEBUG00000013559	RBFOX3	88	53.968	ENSXMAG00000012939	rbfox3b	81	51.460	Xiphophorus_maculatus