EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000013680 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fb70b07|wu:fb70b07
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 115003 bases
Position: chrFYBX02010038.1:35543-150545
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000022193	rRNA_proc-arch	PF13234.6	2.3e-22	1	1
ENSEBUP00000022282	rRNA_proc-arch	PF13234.6	2.5e-22	1	1
ENSEBUP00000022232	rRNA_proc-arch	PF13234.6	2.7e-22	1	1
ENSEBUP00000022193	DEAD	PF00270.29	4.2e-17	1	1
ENSEBUP00000022282	DEAD	PF00270.29	4.5e-17	1	1
ENSEBUP00000022232	DEAD	PF00270.29	4.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022769	-	4755	-	ENSEBUP00000022193	1103 (aa)	-	-
ENSEBUT00000022808	-	4577	-	ENSEBUP00000022232	1192 (aa)	-	-
ENSEBUT00000022858	-	4786	-	ENSEBUP00000022282	1149 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000013680	-	52	47.170	ENSEBUG00000012869	mtrex	59	47.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013680	-	95	57.414	ENSG00000204351	SKIV2L	89	56.597	Homo_sapiens
ENSEBUG00000013680	-	98	53.987	ENSAPOG00000008257	skiv2l	91	54.748	Acanthochromis_polyacanthus
ENSEBUG00000013680	-	95	57.197	ENSAMEG00000002078	SKIV2L	89	56.397	Ailuropoda_melanoleuca
ENSEBUG00000013680	-	98	53.591	ENSACIG00000016719	skiv2l	91	54.091	Amphilophus_citrinellus
ENSEBUG00000013680	-	98	54.504	ENSAOCG00000017352	skiv2l	91	55.374	Amphiprion_ocellaris
ENSEBUG00000013680	-	99	54.106	ENSAPEG00000001055	skiv2l	95	54.996	Amphiprion_percula
ENSEBUG00000013680	-	99	53.874	ENSATEG00000007601	skiv2l	93	54.987	Anabas_testudineus
ENSEBUG00000013680	-	98	59.910	ENSACAG00000011746	SKIV2L	91	59.915	Anolis_carolinensis
ENSEBUG00000013680	-	95	57.714	ENSANAG00000037992	SKIV2L	89	56.870	Aotus_nancymaae
ENSEBUG00000013680	-	98	54.471	ENSACLG00000006886	skiv2l	90	55.383	Astatotilapia_calliptera
ENSEBUG00000013680	-	97	55.700	ENSAMXG00000011517	skiv2l	90	56.435	Astyanax_mexicanus
ENSEBUG00000013680	-	95	56.788	ENSBTAG00000005587	SKIV2L	89	56.321	Bos_taurus
ENSEBUG00000013680	-	89	41.595	WBGene00008502	skih-2	86	41.912	Caenorhabditis_elegans
ENSEBUG00000013680	-	95	57.429	ENSCJAG00000002263	SKIV2L	89	56.980	Callithrix_jacchus
ENSEBUG00000013680	-	95	57.238	ENSCAFG00000000679	SKIV2L	89	56.868	Canis_familiaris
ENSEBUG00000013680	-	95	57.238	ENSCAFG00020000948	SKIV2L	89	56.868	Canis_lupus_dingo
ENSEBUG00000013680	-	95	56.530	ENSCHIG00000012897	SKIV2L	89	56.049	Capra_hircus
ENSEBUG00000013680	-	95	56.530	ENSTSYG00000012133	SKIV2L	89	56.146	Carlito_syrichta
ENSEBUG00000013680	-	95	57.225	ENSCPOG00000001307	SKIV2L	89	56.844	Cavia_porcellus
ENSEBUG00000013680	-	95	57.524	ENSCCAG00000026206	SKIV2L	89	56.696	Cebus_capucinus
ENSEBUG00000013680	-	95	57.034	ENSCATG00000036901	SKIV2L	89	56.375	Cercocebus_atys
ENSEBUG00000013680	-	95	57.769	ENSCLAG00000007678	SKIV2L	89	56.698	Chinchilla_lanigera
ENSEBUG00000013680	-	95	57.266	ENSCSAG00000008988	SKIV2L	89	56.457	Chlorocebus_sabaeus
ENSEBUG00000013680	-	72	69.140	ENSCPBG00000000343	SKIV2L	90	55.042	Chrysemys_picta_bellii
ENSEBUG00000013680	-	91	49.951	ENSCING00000005576	-	92	49.321	Ciona_intestinalis
ENSEBUG00000013680	-	95	57.224	ENSCANG00000039709	SKIV2L	90	56.722	Colobus_angolensis_palliatus
ENSEBUG00000013680	-	97	56.134	ENSCGRG00001008385	Skiv2l	89	56.223	Cricetulus_griseus_chok1gshd
ENSEBUG00000013680	-	98	54.281	ENSCSEG00000011326	skiv2l	90	55.181	Cynoglossus_semilaevis
ENSEBUG00000013680	-	98	53.952	ENSCVAG00000003072	skiv2l	90	59.199	Cyprinodon_variegatus
ENSEBUG00000013680	-	98	55.423	ENSDARG00000062206	skiv2l	91	55.423	Danio_rerio
ENSEBUG00000013680	-	95	55.725	ENSDNOG00000037590	SKIV2L	91	54.359	Dasypus_novemcinctus
ENSEBUG00000013680	-	93	44.155	FBgn0039117	tst	89	44.758	Drosophila_melanogaster
ENSEBUG00000013680	-	63	71.429	ENSETEG00000009522	SKIV2L	60	71.429	Echinops_telfairi
ENSEBUG00000013680	-	91	57.500	ENSEASG00005015534	SKIV2L	89	58.065	Equus_asinus_asinus
ENSEBUG00000013680	-	95	57.170	ENSECAG00000021823	SKIV2L	90	56.146	Equus_caballus
ENSEBUG00000013680	-	53	75.099	ENSEEUG00000005049	SKIV2L	56	75.099	Erinaceus_europaeus
ENSEBUG00000013680	-	98	55.660	ENSELUG00000000181	skiv2l	86	62.761	Esox_lucius
ENSEBUG00000013680	-	95	57.510	ENSFCAG00000004519	SKIV2L	89	56.771	Felis_catus
ENSEBUG00000013680	-	95	57.648	ENSFDAG00000009438	SKIV2L	89	55.662	Fukomys_damarensis
ENSEBUG00000013680	-	98	55.464	ENSFHEG00000008853	skiv2l	91	55.842	Fundulus_heteroclitus
ENSEBUG00000013680	-	98	54.587	ENSGMOG00000005926	skiv2l	91	54.936	Gadus_morhua
ENSEBUG00000013680	-	72	56.272	ENSGALG00000035499	SKIV2L	88	56.050	Gallus_gallus
ENSEBUG00000013680	-	98	54.712	ENSGAFG00000002382	skiv2l	91	55.137	Gambusia_affinis
ENSEBUG00000013680	-	98	53.683	ENSGACG00000002927	skiv2l	90	54.670	Gasterosteus_aculeatus
ENSEBUG00000013680	-	95	57.605	ENSGGOG00000002270	SKIV2L	89	56.771	Gorilla_gorilla
ENSEBUG00000013680	-	98	54.662	ENSHBUG00000000726	skiv2l	90	55.584	Haplochromis_burtoni
ENSEBUG00000013680	-	95	57.170	ENSHGLG00000016596	SKIV2L	89	56.218	Heterocephalus_glaber_female
ENSEBUG00000013680	-	91	57.396	ENSHGLG00100014161	SKIV2L	89	54.616	Heterocephalus_glaber_male
ENSEBUG00000013680	-	88	60.245	ENSHCOG00000007191	skiv2l	87	61.327	Hippocampus_comes
ENSEBUG00000013680	-	98	55.111	ENSIPUG00000016263	skiv2l	91	55.281	Ictalurus_punctatus
ENSEBUG00000013680	-	99	55.778	ENSSTOG00000014596	SKIV2L	89	56.424	Ictidomys_tridecemlineatus
ENSEBUG00000013680	-	55	53.670	ENSLACG00000002986	-	53	51.835	Latimeria_chalumnae
ENSEBUG00000013680	-	95	57.579	ENSLAFG00000014231	SKIV2L	89	56.745	Loxodonta_africana
ENSEBUG00000013680	-	95	57.224	ENSMFAG00000034235	SKIV2L	89	56.722	Macaca_fascicularis
ENSEBUG00000013680	-	95	57.319	ENSMMUG00000000736	SKIV2L	89	56.684	Macaca_mulatta
ENSEBUG00000013680	-	95	57.224	ENSMNEG00000044474	SKIV2L	89	56.722	Macaca_nemestrina
ENSEBUG00000013680	-	95	57.034	ENSMLEG00000030512	SKIV2L	89	56.375	Mandrillus_leucophaeus
ENSEBUG00000013680	-	98	54.445	ENSMAMG00000002927	skiv2l	91	54.974	Mastacembelus_armatus
ENSEBUG00000013680	-	98	54.686	ENSMZEG00005026415	skiv2l	90	55.584	Maylandia_zebra
ENSEBUG00000013680	-	69	71.311	ENSMGAG00000001320	SKIV2L	97	48.466	Meleagris_gallopavo
ENSEBUG00000013680	-	97	55.896	ENSMAUG00000018613	Skiv2l	89	56.190	Mesocricetus_auratus
ENSEBUG00000013680	-	95	57.102	ENSMICG00000046331	SKIV2L	89	56.234	Microcebus_murinus
ENSEBUG00000013680	-	97	54.986	ENSMOCG00000014240	Skiv2l	89	55.448	Microtus_ochrogaster
ENSEBUG00000013680	-	99	52.489	ENSMMOG00000014547	skiv2l	90	53.482	Mola_mola
ENSEBUG00000013680	-	71	64.331	ENSMODG00000015052	SKIV2L	90	56.820	Monodelphis_domestica
ENSEBUG00000013680	-	98	53.327	ENSMALG00000010535	skiv2l	90	54.286	Monopterus_albus
ENSEBUG00000013680	-	97	56.506	MGP_CAROLIEiJ_G0021477	Skiv2l	89	56.571	Mus_caroli
ENSEBUG00000013680	-	97	56.437	ENSMUSG00000040356	Skiv2l	89	56.632	Mus_musculus
ENSEBUG00000013680	-	97	56.611	MGP_PahariEiJ_G0020472	Skiv2l	89	56.745	Mus_pahari
ENSEBUG00000013680	-	97	56.437	MGP_SPRETEiJ_G0022382	Skiv2l	89	56.632	Mus_spretus
ENSEBUG00000013680	-	95	56.993	ENSMPUG00000010567	SKIV2L	89	56.522	Mustela_putorius_furo
ENSEBUG00000013680	-	95	57.960	ENSMLUG00000000628	SKIV2L	89	57.093	Myotis_lucifugus
ENSEBUG00000013680	-	99	53.761	ENSNBRG00000018650	skiv2l	90	55.052	Neolamprologus_brichardi
ENSEBUG00000013680	-	95	55.913	ENSNLEG00000006451	SKIV2L	89	55.585	Nomascus_leucogenys
ENSEBUG00000013680	-	81	54.353	ENSMEUG00000006072	SKIV2L	69	54.961	Notamacropus_eugenii
ENSEBUG00000013680	-	95	57.007	ENSOPRG00000003972	SKIV2L	89	56.435	Ochotona_princeps
ENSEBUG00000013680	-	95	57.020	ENSODEG00000017516	SKIV2L	89	56.223	Octodon_degus
ENSEBUG00000013680	-	98	54.788	ENSONIG00000013500	skiv2l	91	55.211	Oreochromis_niloticus
ENSEBUG00000013680	-	95	56.777	ENSOCUG00000007019	SKIV2L	89	55.834	Oryctolagus_cuniculus
ENSEBUG00000013680	-	98	54.922	ENSORLG00000002021	skiv2l	94	55.422	Oryzias_latipes
ENSEBUG00000013680	-	98	55.064	ENSORLG00020009462	skiv2l	94	55.422	Oryzias_latipes_hni
ENSEBUG00000013680	-	98	54.880	ENSORLG00015016750	skiv2l	94	55.250	Oryzias_latipes_hsok
ENSEBUG00000013680	-	98	55.383	ENSOMEG00000008531	skiv2l	91	55.983	Oryzias_melastigma
ENSEBUG00000013680	-	97	56.570	ENSOGAG00000009578	SKIV2L	89	56.719	Otolemur_garnettii
ENSEBUG00000013680	-	91	55.566	ENSOARG00000002411	-	89	52.991	Ovis_aries
ENSEBUG00000013680	-	95	57.075	ENSPPAG00000040211	SKIV2L	89	56.658	Pan_paniscus
ENSEBUG00000013680	-	95	57.579	ENSPPRG00000005017	SKIV2L	89	56.919	Panthera_pardus
ENSEBUG00000013680	-	95	57.007	ENSPTIG00000021656	SKIV2L	89	56.397	Panthera_tigris_altaica
ENSEBUG00000013680	-	95	57.550	ENSPTRG00000017997	SKIV2L	89	56.722	Pan_troglodytes
ENSEBUG00000013680	-	95	55.955	ENSPANG00000011501	SKIV2L	89	55.749	Papio_anubis
ENSEBUG00000013680	-	99	55.292	ENSPKIG00000011876	skiv2l	87	61.741	Paramormyrops_kingsleyae
ENSEBUG00000013680	-	91	62.137	ENSPMGG00000019707	skiv2l	90	54.584	Periophthalmus_magnuspinnatus
ENSEBUG00000013680	-	97	55.959	ENSPEMG00000019001	Skiv2l	89	56.397	Peromyscus_maniculatus_bairdii
ENSEBUG00000013680	-	99	56.062	ENSPCIG00000018792	SKIV2L	90	56.870	Phascolarctos_cinereus
ENSEBUG00000013680	-	98	54.504	ENSPFOG00000002424	skiv2l	91	54.940	Poecilia_formosa
ENSEBUG00000013680	-	98	54.628	ENSPLAG00000018304	skiv2l	91	55.055	Poecilia_latipinna
ENSEBUG00000013680	-	98	54.712	ENSPMEG00000006997	skiv2l	91	55.137	Poecilia_mexicana
ENSEBUG00000013680	-	99	51.233	ENSPREG00000002277	skiv2l	90	52.163	Poecilia_reticulata
ENSEBUG00000013680	-	95	56.939	ENSPPYG00000016472	SKIV2L	89	56.163	Pongo_abelii
ENSEBUG00000013680	-	61	74.026	ENSPCAG00000004178	SKIV2L	58	74.026	Procavia_capensis
ENSEBUG00000013680	-	95	57.361	ENSPCOG00000010308	SKIV2L	89	56.894	Propithecus_coquereli
ENSEBUG00000013680	-	96	56.514	ENSPVAG00000005136	SKIV2L	91	55.575	Pteropus_vampyrus
ENSEBUG00000013680	-	94	59.220	ENSPNYG00000017853	skiv2l	89	59.600	Pundamilia_nyererei
ENSEBUG00000013680	-	97	55.937	ENSPNAG00000011823	skiv2l	91	55.918	Pygocentrus_nattereri
ENSEBUG00000013680	-	97	56.837	ENSRNOG00000000421	Skiv2l	89	56.882	Rattus_norvegicus
ENSEBUG00000013680	-	95	55.943	ENSRBIG00000035485	SKIV2L	89	55.806	Rhinopithecus_bieti
ENSEBUG00000013680	-	95	57.224	ENSRROG00000036429	SKIV2L	89	56.722	Rhinopithecus_roxellana
ENSEBUG00000013680	-	97	35.670	YLR398C	-	87	35.868	Saccharomyces_cerevisiae
ENSEBUG00000013680	-	95	57.810	ENSSBOG00000027920	SKIV2L	89	56.957	Saimiri_boliviensis_boliviensis
ENSEBUG00000013680	-	99	55.333	ENSSHAG00000008963	SKIV2L	90	55.604	Sarcophilus_harrisii
ENSEBUG00000013680	-	98	55.729	ENSSFOG00015016930	skiv2l	91	55.993	Scleropages_formosus
ENSEBUG00000013680	-	98	55.119	ENSSMAG00000020185	skiv2l	91	55.774	Scophthalmus_maximus
ENSEBUG00000013680	-	98	54.880	ENSSDUG00000019977	skiv2l	91	55.469	Seriola_dumerili
ENSEBUG00000013680	-	98	50.919	ENSSLDG00000024382	skiv2l	90	52.007	Seriola_lalandi_dorsalis
ENSEBUG00000013680	-	98	57.540	ENSSPUG00000012945	SKIV2L	93	58.045	Sphenodon_punctatus
ENSEBUG00000013680	-	99	53.958	ENSSPAG00000012904	skiv2l	96	54.855	Stegastes_partitus
ENSEBUG00000013680	-	99	56.113	ENSSSCG00000001424	SKIV2L	88	58.428	Sus_scrofa
ENSEBUG00000013680	-	64	69.355	ENSTRUG00000000966	skiv2l	71	69.355	Takifugu_rubripes
ENSEBUG00000013680	-	98	52.709	ENSTNIG00000004382	skiv2l	90	53.694	Tetraodon_nigroviridis
ENSEBUG00000013680	-	91	58.360	ENSTBEG00000003462	SKIV2L	84	59.243	Tupaia_belangeri
ENSEBUG00000013680	-	95	53.003	ENSTTRG00000005931	SKIV2L	89	52.654	Tursiops_truncatus
ENSEBUG00000013680	-	95	57.483	ENSUAMG00000024336	SKIV2L	90	56.832	Ursus_americanus
ENSEBUG00000013680	-	91	57.926	ENSUMAG00000012666	SKIV2L	89	58.428	Ursus_maritimus
ENSEBUG00000013680	-	95	57.333	ENSVVUG00000022807	SKIV2L	89	56.955	Vulpes_vulpes
ENSEBUG00000013680	-	99	53.885	ENSXETG00000010932	skiv2l	92	54.007	Xenopus_tropicalis
ENSEBUG00000013680	-	98	54.296	ENSXCOG00000019517	skiv2l	88	54.748	Xiphophorus_couchianus
ENSEBUG00000013680	-	98	54.512	ENSXMAG00000014079	skiv2l	91	54.949	Xiphophorus_maculatus