EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000013703 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b%2C subunit 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 56431 bases
Position: chrFYBX02009565.1:2860260-2916690
Accession: ZDB-GENE-070928-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000022287	DUF382	PF04037.13	4.4e-59	1	1
ENSEBUP00000022243	DUF382	PF04037.13	4.7e-59	1	1
ENSEBUP00000022287	SAP	PF02037.27	5.9e-10	1	1
ENSEBUP00000022243	SAP	PF02037.27	6.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022863	-	4930	-	ENSEBUP00000022287	870 (aa)	-	-
ENSEBUT00000022820	-	5038	-	ENSEBUP00000022243	906 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013703	sf3b2	99	60.174	ENSG00000087365	SF3B2	99	83.175	Homo_sapiens
ENSEBUG00000013703	sf3b2	97	56.478	ENSAPOG00000001974	sf3b2	96	55.778	Acanthochromis_polyacanthus
ENSEBUG00000013703	sf3b2	99	60.240	ENSAMEG00000017206	SF3B2	98	58.963	Ailuropoda_melanoleuca
ENSEBUG00000013703	sf3b2	99	55.927	ENSACIG00000000624	sf3b2	84	62.240	Amphilophus_citrinellus
ENSEBUG00000013703	sf3b2	99	57.401	ENSAOCG00000009207	sf3b2	99	57.465	Amphiprion_ocellaris
ENSEBUG00000013703	sf3b2	99	57.696	ENSAPEG00000002762	sf3b2	97	56.606	Amphiprion_percula
ENSEBUG00000013703	sf3b2	99	60.065	ENSANAG00000029120	SF3B2	98	58.900	Aotus_nancymaae
ENSEBUG00000013703	sf3b2	99	56.142	ENSACLG00000014771	sf3b2	99	55.328	Astatotilapia_calliptera
ENSEBUG00000013703	sf3b2	99	54.925	ENSAMXG00000007929	sf3b2	92	60.553	Astyanax_mexicanus
ENSEBUG00000013703	sf3b2	99	60.196	ENSBTAG00000002778	SF3B2	98	58.919	Bos_taurus
ENSEBUG00000013703	sf3b2	60	50.699	WBGene00021004	sftb-2	89	51.273	Caenorhabditis_elegans
ENSEBUG00000013703	sf3b2	99	60.065	ENSCJAG00000001656	SF3B2	98	58.900	Callithrix_jacchus
ENSEBUG00000013703	sf3b2	99	60.262	ENSCAFG00000013033	SF3B2	92	71.377	Canis_familiaris
ENSEBUG00000013703	sf3b2	99	60.262	ENSCAFG00020015382	SF3B2	92	71.377	Canis_lupus_dingo
ENSEBUG00000013703	sf3b2	99	60.262	ENSCHIG00000011211	SF3B2	98	58.983	Capra_hircus
ENSEBUG00000013703	sf3b2	99	60.044	ENSTSYG00000000959	SF3B2	98	58.900	Carlito_syrichta
ENSEBUG00000013703	sf3b2	90	57.022	ENSCPOG00000008294	SF3B2	98	54.578	Cavia_porcellus
ENSEBUG00000013703	sf3b2	99	60.065	ENSCCAG00000035256	SF3B2	98	58.900	Cebus_capucinus
ENSEBUG00000013703	sf3b2	99	60.174	ENSCATG00000042240	SF3B2	98	58.900	Cercocebus_atys
ENSEBUG00000013703	sf3b2	99	59.802	ENSCLAG00000016852	SF3B2	98	57.638	Chinchilla_lanigera
ENSEBUG00000013703	sf3b2	99	60.174	ENSCSAG00000008121	SF3B2	98	58.900	Chlorocebus_sabaeus
ENSEBUG00000013703	sf3b2	82	79.151	ENSCHOG00000001476	SF3B2	82	78.756	Choloepus_hoffmanni
ENSEBUG00000013703	sf3b2	72	70.076	ENSCPBG00000022465	SF3B2	87	68.550	Chrysemys_picta_bellii
ENSEBUG00000013703	sf3b2	74	58.590	ENSCING00000005665	-	83	67.416	Ciona_intestinalis
ENSEBUG00000013703	sf3b2	58	67.664	ENSCSAVG00000002029	-	84	65.730	Ciona_savignyi
ENSEBUG00000013703	sf3b2	99	60.174	ENSCANG00000039680	SF3B2	98	58.900	Colobus_angolensis_palliatus
ENSEBUG00000013703	sf3b2	99	59.649	ENSCGRG00001015741	Sf3b2	98	57.638	Cricetulus_griseus_chok1gshd
ENSEBUG00000013703	sf3b2	99	59.649	ENSCGRG00000018110	Sf3b2	98	57.638	Cricetulus_griseus_crigri
ENSEBUG00000013703	sf3b2	58	77.111	ENSCSEG00000000230	sf3b2	78	65.046	Cynoglossus_semilaevis
ENSEBUG00000013703	sf3b2	99	56.921	ENSCVAG00000003357	sf3b2	91	60.637	Cyprinodon_variegatus
ENSEBUG00000013703	sf3b2	99	59.716	ENSDNOG00000009484	SF3B2	98	58.550	Dasypus_novemcinctus
ENSEBUG00000013703	sf3b2	99	58.791	ENSDORG00000002495	Sf3b2	98	57.205	Dipodomys_ordii
ENSEBUG00000013703	sf3b2	67	87.845	ENSETEG00000020284	SF3B2	80	75.177	Echinops_telfairi
ENSEBUG00000013703	sf3b2	99	60.371	ENSEASG00005004508	SF3B2	98	59.199	Equus_asinus_asinus
ENSEBUG00000013703	sf3b2	99	60.371	ENSECAG00000024461	SF3B2	98	59.199	Equus_caballus
ENSEBUG00000013703	sf3b2	58	80.508	ENSEEUG00000014278	-	53	80.508	Erinaceus_europaeus
ENSEBUG00000013703	sf3b2	99	54.545	ENSELUG00000005586	sf3b2	90	61.097	Esox_lucius
ENSEBUG00000013703	sf3b2	99	60.371	ENSFCAG00000013289	SF3B2	92	71.377	Felis_catus
ENSEBUG00000013703	sf3b2	75	60.441	ENSFALG00000014653	SF3B2	91	60.850	Ficedula_albicollis
ENSEBUG00000013703	sf3b2	99	59.891	ENSFDAG00000019806	SF3B2	98	58.792	Fukomys_damarensis
ENSEBUG00000013703	sf3b2	99	55.925	ENSFHEG00000020968	sf3b2	91	59.796	Fundulus_heteroclitus
ENSEBUG00000013703	sf3b2	75	66.279	ENSGMOG00000012131	sf3b2	81	77.239	Gadus_morhua
ENSEBUG00000013703	sf3b2	58	78.008	ENSGAFG00000001675	sf3b2	84	62.696	Gambusia_affinis
ENSEBUG00000013703	sf3b2	58	77.068	ENSGACG00000019012	sf3b2	98	65.476	Gasterosteus_aculeatus
ENSEBUG00000013703	sf3b2	99	59.489	ENSGAGG00000023916	SF3B2	98	57.426	Gopherus_agassizii
ENSEBUG00000013703	sf3b2	92	80.707	ENSGGOG00000028448	SF3B2	98	80.978	Gorilla_gorilla
ENSEBUG00000013703	sf3b2	99	56.573	ENSHBUG00000017349	sf3b2	99	55.221	Haplochromis_burtoni
ENSEBUG00000013703	sf3b2	99	59.912	ENSHGLG00000010807	SF3B2	98	57.530	Heterocephalus_glaber_female
ENSEBUG00000013703	sf3b2	99	60.219	ENSHGLG00100006361	SF3B2	98	58.684	Heterocephalus_glaber_male
ENSEBUG00000013703	sf3b2	99	56.385	ENSHCOG00000016203	sf3b2	99	55.411	Hippocampus_comes
ENSEBUG00000013703	sf3b2	99	56.620	ENSIPUG00000009383	sf3b2	84	61.886	Ictalurus_punctatus
ENSEBUG00000013703	sf3b2	99	60.153	ENSSTOG00000028892	SF3B2	98	58.792	Ictidomys_tridecemlineatus
ENSEBUG00000013703	sf3b2	99	59.430	ENSJJAG00000018193	Sf3b2	98	57.421	Jaculus_jaculus
ENSEBUG00000013703	sf3b2	88	76.966	ENSKMAG00000020181	sf3b2	89	62.698	Kryptolebias_marmoratus
ENSEBUG00000013703	sf3b2	99	55.970	ENSLBEG00000027739	sf3b2	92	62.385	Labrus_bergylta
ENSEBUG00000013703	sf3b2	67	78.198	ENSLACG00000010429	SF3B2	82	66.574	Latimeria_chalumnae
ENSEBUG00000013703	sf3b2	99	59.516	ENSLAFG00000002128	SF3B2	89	72.744	Loxodonta_africana
ENSEBUG00000013703	sf3b2	99	60.109	ENSMFAG00000003064	SF3B2	98	58.836	Macaca_fascicularis
ENSEBUG00000013703	sf3b2	99	57.889	ENSMMUG00000011743	SF3B2	98	55.603	Macaca_mulatta
ENSEBUG00000013703	sf3b2	99	60.283	ENSMNEG00000034437	SF3B2	98	59.008	Macaca_nemestrina
ENSEBUG00000013703	sf3b2	99	60.609	ENSMLEG00000029373	SF3B2	98	59.008	Mandrillus_leucophaeus
ENSEBUG00000013703	sf3b2	99	57.282	ENSMAMG00000014103	sf3b2	89	63.926	Mastacembelus_armatus
ENSEBUG00000013703	sf3b2	99	56.142	ENSMZEG00005020789	sf3b2	89	62.302	Maylandia_zebra
ENSEBUG00000013703	sf3b2	63	79.156	ENSMAUG00000017040	Sf3b2	97	79.211	Mesocricetus_auratus
ENSEBUG00000013703	sf3b2	99	59.495	ENSMICG00000016942	-	98	58.655	Microcebus_murinus
ENSEBUG00000013703	sf3b2	99	59.956	ENSMICG00000008565	-	93	76.977	Microcebus_murinus
ENSEBUG00000013703	sf3b2	99	59.320	ENSMOCG00000003136	Sf3b2	98	57.313	Microtus_ochrogaster
ENSEBUG00000013703	sf3b2	99	55.556	ENSMMOG00000012928	sf3b2	80	63.172	Mola_mola
ENSEBUG00000013703	sf3b2	72	65.649	ENSMODG00000025020	-	83	74.576	Monodelphis_domestica
ENSEBUG00000013703	sf3b2	87	62.926	ENSMODG00000008490	-	65	78.947	Monodelphis_domestica
ENSEBUG00000013703	sf3b2	99	55.809	ENSMALG00000015137	sf3b2	83	62.517	Monopterus_albus
ENSEBUG00000013703	sf3b2	99	59.495	MGP_CAROLIEiJ_G0022539	Sf3b2	98	57.313	Mus_caroli
ENSEBUG00000013703	sf3b2	99	59.539	ENSMUSG00000024853	Sf3b2	98	57.530	Mus_musculus
ENSEBUG00000013703	sf3b2	99	59.539	MGP_PahariEiJ_G0014036	Sf3b2	98	57.421	Mus_pahari
ENSEBUG00000013703	sf3b2	99	59.430	MGP_SPRETEiJ_G0023453	Sf3b2	98	57.421	Mus_spretus
ENSEBUG00000013703	sf3b2	99	60.590	ENSMPUG00000011349	SF3B2	92	71.377	Mustela_putorius_furo
ENSEBUG00000013703	sf3b2	99	59.672	ENSMLUG00000011136	SF3B2	90	72.744	Myotis_lucifugus
ENSEBUG00000013703	sf3b2	99	59.255	ENSNGAG00000012103	Sf3b2	98	57.533	Nannospalax_galili
ENSEBUG00000013703	sf3b2	99	57.592	ENSNLEG00000006007	SF3B2	98	57.638	Nomascus_leucogenys
ENSEBUG00000013703	sf3b2	88	77.841	ENSMEUG00000000019	SF3B2	91	69.034	Notamacropus_eugenii
ENSEBUG00000013703	sf3b2	99	56.781	ENSODEG00000017764	SF3B2	98	54.230	Octodon_degus
ENSEBUG00000013703	sf3b2	99	56.330	ENSONIG00000013068	sf3b2	100	52.097	Oreochromis_niloticus
ENSEBUG00000013703	sf3b2	86	60.963	ENSOANG00000012482	SF3B2	76	82.022	Ornithorhynchus_anatinus
ENSEBUG00000013703	sf3b2	87	65.633	ENSOCUG00000015722	-	98	59.477	Oryctolagus_cuniculus
ENSEBUG00000013703	sf3b2	64	42.931	ENSOCUG00000024154	-	60	53.313	Oryctolagus_cuniculus
ENSEBUG00000013703	sf3b2	86	63.520	ENSORLG00000008235	sf3b2	91	61.862	Oryzias_latipes
ENSEBUG00000013703	sf3b2	91	59.439	ENSORLG00020005357	sf3b2	91	62.483	Oryzias_latipes_hni
ENSEBUG00000013703	sf3b2	86	63.520	ENSORLG00015022454	sf3b2	74	76.592	Oryzias_latipes_hsok
ENSEBUG00000013703	sf3b2	86	62.788	ENSOMEG00000017480	sf3b2	95	62.532	Oryzias_melastigma
ENSEBUG00000013703	sf3b2	99	59.126	ENSOGAG00000005799	SF3B2	98	58.037	Otolemur_garnettii
ENSEBUG00000013703	sf3b2	99	60.242	ENSOARG00000002125	SF3B2	98	66.135	Ovis_aries
ENSEBUG00000013703	sf3b2	99	60.174	ENSPPAG00000007359	SF3B2	98	58.900	Pan_paniscus
ENSEBUG00000013703	sf3b2	99	60.371	ENSPPRG00000013334	SF3B2	92	71.377	Panthera_pardus
ENSEBUG00000013703	sf3b2	99	60.371	ENSPTIG00000015022	SF3B2	92	71.377	Panthera_tigris_altaica
ENSEBUG00000013703	sf3b2	99	60.174	ENSPTRG00000003912	SF3B2	98	58.900	Pan_troglodytes
ENSEBUG00000013703	sf3b2	99	60.174	ENSPANG00000008593	SF3B2	98	58.900	Papio_anubis
ENSEBUG00000013703	sf3b2	99	57.821	ENSPKIG00000016576	sf3b2	99	57.540	Paramormyrops_kingsleyae
ENSEBUG00000013703	sf3b2	82	66.489	ENSPSIG00000003158	SF3B2	99	62.672	Pelodiscus_sinensis
ENSEBUG00000013703	sf3b2	99	59.539	ENSPEMG00000015437	Sf3b2	98	57.638	Peromyscus_maniculatus_bairdii
ENSEBUG00000013703	sf3b2	87	59.016	ENSPEMG00000015451	-	71	70.991	Peromyscus_maniculatus_bairdii
ENSEBUG00000013703	sf3b2	99	57.831	ENSPCIG00000008381	SF3B2	97	58.379	Phascolarctos_cinereus
ENSEBUG00000013703	sf3b2	90	78.008	ENSPFOG00000002552	sf3b2	90	62.598	Poecilia_formosa
ENSEBUG00000013703	sf3b2	88	78.195	ENSPLAG00000001471	sf3b2	90	62.730	Poecilia_latipinna
ENSEBUG00000013703	sf3b2	90	78.008	ENSPMEG00000013180	sf3b2	90	62.861	Poecilia_mexicana
ENSEBUG00000013703	sf3b2	64	78.195	ENSPREG00000002665	sf3b2	90	62.169	Poecilia_reticulata
ENSEBUG00000013703	sf3b2	73	53.294	ENSPPYG00000003034	-	96	51.520	Pongo_abelii
ENSEBUG00000013703	sf3b2	99	59.868	ENSPCAG00000005129	SF3B2	98	58.874	Procavia_capensis
ENSEBUG00000013703	sf3b2	99	60.065	ENSPCOG00000025375	SF3B2	98	58.792	Propithecus_coquereli
ENSEBUG00000013703	sf3b2	57	89.912	ENSPVAG00000005466	-	79	89.912	Pteropus_vampyrus
ENSEBUG00000013703	sf3b2	82	62.252	ENSPNYG00000023594	sf3b2	92	62.051	Pundamilia_nyererei
ENSEBUG00000013703	sf3b2	99	55.106	ENSPNAG00000001891	sf3b2	90	61.806	Pygocentrus_nattereri
ENSEBUG00000013703	sf3b2	99	59.320	ENSRNOG00000020412	Sf3b2	98	57.313	Rattus_norvegicus
ENSEBUG00000013703	sf3b2	99	60.174	ENSRBIG00000034065	SF3B2	98	59.008	Rhinopithecus_bieti
ENSEBUG00000013703	sf3b2	99	60.174	ENSRROG00000034496	SF3B2	98	59.008	Rhinopithecus_roxellana
ENSEBUG00000013703	sf3b2	99	59.283	ENSSBOG00000026337	SF3B2	81	65.119	Saimiri_boliviensis_boliviensis
ENSEBUG00000013703	sf3b2	58	68.831	ENSSHAG00000018043	-	64	68.089	Sarcophilus_harrisii
ENSEBUG00000013703	sf3b2	99	57.445	ENSSFOG00015021125	sf3b2	83	63.742	Scleropages_formosus
ENSEBUG00000013703	sf3b2	99	53.556	ENSSMAG00000004079	sf3b2	97	56.419	Scophthalmus_maximus
ENSEBUG00000013703	sf3b2	91	75.627	ENSSDUG00000008499	sf3b2	79	74.552	Seriola_dumerili
ENSEBUG00000013703	sf3b2	88	78.302	ENSSLDG00000006838	sf3b2	92	62.861	Seriola_lalandi_dorsalis
ENSEBUG00000013703	sf3b2	92	70.840	ENSSPUG00000009198	SF3B2	99	58.180	Sphenodon_punctatus
ENSEBUG00000013703	sf3b2	99	57.721	ENSSPAG00000004406	sf3b2	99	57.311	Stegastes_partitus
ENSEBUG00000013703	sf3b2	99	59.653	ENSSSCG00000012957	SF3B2	98	59.032	Sus_scrofa
ENSEBUG00000013703	sf3b2	85	54.377	ENSTRUG00000007611	sf3b2	94	56.878	Takifugu_rubripes
ENSEBUG00000013703	sf3b2	58	76.173	ENSTNIG00000007441	sf3b2	67	72.545	Tetraodon_nigroviridis
ENSEBUG00000013703	sf3b2	75	81.429	ENSTBEG00000004258	SF3B2	73	81.429	Tupaia_belangeri
ENSEBUG00000013703	sf3b2	99	60.590	ENSTTRG00000014339	SF3B2	98	58.881	Tursiops_truncatus
ENSEBUG00000013703	sf3b2	96	59.910	ENSUAMG00000020754	SF3B2	90	68.211	Ursus_americanus
ENSEBUG00000013703	sf3b2	99	60.371	ENSUMAG00000010994	SF3B2	92	71.377	Ursus_maritimus
ENSEBUG00000013703	sf3b2	99	60.262	ENSVVUG00000027029	SF3B2	92	77.174	Vulpes_vulpes
ENSEBUG00000013703	sf3b2	88	58.570	ENSXETG00000008422	sf3b2	87	62.345	Xenopus_tropicalis
ENSEBUG00000013703	sf3b2	58	78.195	ENSXCOG00000008943	sf3b2	75	77.444	Xiphophorus_couchianus
ENSEBUG00000013703	sf3b2	88	78.383	ENSXMAG00000008467	sf3b2	90	62.565	Xiphophorus_maculatus