EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000013731 (Gene tree)
Gene ID: -
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 38732 bases
Position: chrFYBX02009615.1:3042489-3081220
Accession: 25542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000022314	AARP2CN	PF08142.12	6.2e-19	1	1
ENSEBUP00000022293	AARP2CN	PF08142.12	6.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022869	TSR1-201	4719	-	ENSEBUP00000022293	785 (aa)	-	-
ENSEBUT00000022890	TSR1-202	4602	-	ENSEBUP00000022314	746 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013731	TSR1	97	52.857	ENSG00000167721	TSR1	95	52.857	Homo_sapiens
ENSEBUG00000013731	TSR1	97	50.697	ENSAPOG00000020891	tsr1	94	52.405	Acanthochromis_polyacanthus
ENSEBUG00000013731	TSR1	98	51.410	ENSAMEG00000007599	TSR1	95	51.786	Ailuropoda_melanoleuca
ENSEBUG00000013731	TSR1	98	51.216	ENSACIG00000007090	tsr1	95	51.472	Amphilophus_citrinellus
ENSEBUG00000013731	TSR1	97	51.083	ENSAOCG00000023284	tsr1	94	52.866	Amphiprion_ocellaris
ENSEBUG00000013731	TSR1	94	51.178	ENSAPEG00000008452	tsr1	98	53.010	Amphiprion_percula
ENSEBUG00000013731	TSR1	98	50.250	ENSATEG00000021961	tsr1	95	51.375	Anabas_testudineus
ENSEBUG00000013731	TSR1	94	53.701	ENSAPLG00000013422	TSR1	100	54.704	Anas_platyrhynchos
ENSEBUG00000013731	TSR1	75	47.285	ENSACAG00000000859	TSR1	93	47.359	Anolis_carolinensis
ENSEBUG00000013731	TSR1	97	53.064	ENSANAG00000031071	TSR1	95	53.646	Aotus_nancymaae
ENSEBUG00000013731	TSR1	98	50.628	ENSACLG00000007595	tsr1	95	52.010	Astatotilapia_calliptera
ENSEBUG00000013731	TSR1	50	46.787	ENSAMXG00000008470	tsr1	86	46.973	Astyanax_mexicanus
ENSEBUG00000013731	TSR1	96	53.482	ENSBTAG00000004225	TSR1	94	54.068	Bos_taurus
ENSEBUG00000013731	TSR1	95	39.868	WBGene00006497	tag-151	92	40.236	Caenorhabditis_elegans
ENSEBUG00000013731	TSR1	96	53.219	ENSCJAG00000012456	TSR1	94	53.806	Callithrix_jacchus
ENSEBUG00000013731	TSR1	97	52.659	ENSCAFG00000002106	-	95	52.918	Canis_familiaris
ENSEBUG00000013731	TSR1	88	49.713	ENSCAFG00000019273	-	99	54.711	Canis_familiaris
ENSEBUG00000013731	TSR1	97	52.666	ENSCAFG00020009728	TSR1	95	52.926	Canis_lupus_dingo
ENSEBUG00000013731	TSR1	98	53.101	ENSCHIG00000023935	TSR1	96	53.677	Capra_hircus
ENSEBUG00000013731	TSR1	98	52.523	ENSTSYG00000005468	TSR1	95	53.585	Carlito_syrichta
ENSEBUG00000013731	TSR1	91	51.604	ENSCPOG00000014833	TSR1	95	52.786	Cavia_porcellus
ENSEBUG00000013731	TSR1	91	51.532	ENSCCAG00000028962	TSR1	94	52.156	Cebus_capucinus
ENSEBUG00000013731	TSR1	97	53.064	ENSCATG00000044262	TSR1	95	53.385	Cercocebus_atys
ENSEBUG00000013731	TSR1	96	54.008	ENSCLAG00000005567	TSR1	94	54.008	Chinchilla_lanigera
ENSEBUG00000013731	TSR1	97	52.803	ENSCSAG00000013788	TSR1	95	53.125	Chlorocebus_sabaeus
ENSEBUG00000013731	TSR1	98	52.124	ENSCPBG00000020363	TSR1	93	52.185	Chrysemys_picta_bellii
ENSEBUG00000013731	TSR1	96	46.803	ENSCING00000020658	-	96	46.675	Ciona_intestinalis
ENSEBUG00000013731	TSR1	95	44.589	ENSCSAVG00000001875	-	95	44.589	Ciona_savignyi
ENSEBUG00000013731	TSR1	98	48.715	ENSCANG00000033056	TSR1	94	48.892	Colobus_angolensis_palliatus
ENSEBUG00000013731	TSR1	98	52.196	ENSCGRG00001023942	Tsr1	96	52.842	Cricetulus_griseus_chok1gshd
ENSEBUG00000013731	TSR1	98	45.019	ENSCGRG00000013015	Tsr1	95	50.323	Cricetulus_griseus_crigri
ENSEBUG00000013731	TSR1	98	49.812	ENSCSEG00000013009	tsr1	95	51.392	Cynoglossus_semilaevis
ENSEBUG00000013731	TSR1	97	51.519	ENSCVAG00000000506	tsr1	94	51.519	Cyprinodon_variegatus
ENSEBUG00000013731	TSR1	98	51.334	ENSDARG00000007744	tsr1	95	51.334	Danio_rerio
ENSEBUG00000013731	TSR1	98	51.809	ENSDNOG00000004715	TSR1	99	53.734	Dasypus_novemcinctus
ENSEBUG00000013731	TSR1	95	47.326	ENSDORG00000023234	-	96	47.326	Dipodomys_ordii
ENSEBUG00000013731	TSR1	98	53.747	ENSDORG00000016371	-	96	53.747	Dipodomys_ordii
ENSEBUG00000013731	TSR1	95	42.506	FBgn0037073	Tsr1	92	42.746	Drosophila_melanogaster
ENSEBUG00000013731	TSR1	87	62.706	ENSETEG00000017534	TSR1	96	47.938	Echinops_telfairi
ENSEBUG00000013731	TSR1	96	53.245	ENSEASG00005009302	TSR1	92	54.199	Equus_asinus_asinus
ENSEBUG00000013731	TSR1	98	53.101	ENSECAG00000009114	TSR1	94	54.079	Equus_caballus
ENSEBUG00000013731	TSR1	98	51.128	ENSELUG00000020984	tsr1	91	51.128	Esox_lucius
ENSEBUG00000013731	TSR1	98	51.852	ENSFCAG00000006313	TSR1	96	52.497	Felis_catus
ENSEBUG00000013731	TSR1	98	53.787	ENSFALG00000006532	TSR1	96	53.905	Ficedula_albicollis
ENSEBUG00000013731	TSR1	98	53.687	ENSFDAG00000006038	TSR1	96	53.687	Fukomys_damarensis
ENSEBUG00000013731	TSR1	97	50.189	ENSFHEG00000003626	tsr1	94	51.201	Fundulus_heteroclitus
ENSEBUG00000013731	TSR1	98	48.416	ENSGMOG00000010336	tsr1	95	49.431	Gadus_morhua
ENSEBUG00000013731	TSR1	98	50.125	ENSGAFG00000012993	tsr1	97	50.685	Gambusia_affinis
ENSEBUG00000013731	TSR1	97	50.128	ENSGACG00000010843	tsr1	94	51.407	Gasterosteus_aculeatus
ENSEBUG00000013731	TSR1	98	52.455	ENSGAGG00000025619	-	96	52.584	Gopherus_agassizii
ENSEBUG00000013731	TSR1	97	52.857	ENSGGOG00000001704	TSR1	95	52.857	Gorilla_gorilla
ENSEBUG00000013731	TSR1	98	50.563	ENSHBUG00000017904	tsr1	99	52.057	Haplochromis_burtoni
ENSEBUG00000013731	TSR1	98	52.972	ENSHGLG00000012806	-	96	53.101	Heterocephalus_glaber_female
ENSEBUG00000013731	TSR1	94	47.709	ENSHGLG00000015688	-	95	47.563	Heterocephalus_glaber_female
ENSEBUG00000013731	TSR1	98	52.972	ENSHGLG00100015392	TSR1	96	53.101	Heterocephalus_glaber_male
ENSEBUG00000013731	TSR1	98	51.414	ENSHCOG00000001432	tsr1	95	51.799	Hippocampus_comes
ENSEBUG00000013731	TSR1	98	50.746	ENSIPUG00000004618	tsr1	95	51.119	Ictalurus_punctatus
ENSEBUG00000013731	TSR1	97	53.133	ENSSTOG00000011819	TSR1	95	53.333	Ictidomys_tridecemlineatus
ENSEBUG00000013731	TSR1	93	50.815	ENSJJAG00000019505	Tsr1	95	50.815	Jaculus_jaculus
ENSEBUG00000013731	TSR1	97	52.168	ENSKMAG00000005763	tsr1	94	52.679	Kryptolebias_marmoratus
ENSEBUG00000013731	TSR1	97	50.444	ENSLBEG00000021823	tsr1	94	51.458	Labrus_bergylta
ENSEBUG00000013731	TSR1	98	52.551	ENSLACG00000002197	TSR1	95	52.679	Latimeria_chalumnae
ENSEBUG00000013731	TSR1	84	50.751	ENSLOCG00000006491	TSR1	88	50.751	Lepisosteus_oculatus
ENSEBUG00000013731	TSR1	97	53.064	ENSMFAG00000021330	TSR1	95	53.385	Macaca_fascicularis
ENSEBUG00000013731	TSR1	97	52.803	ENSMMUG00000017519	TSR1	95	53.125	Macaca_mulatta
ENSEBUG00000013731	TSR1	97	53.064	ENSMNEG00000031382	TSR1	95	53.385	Macaca_nemestrina
ENSEBUG00000013731	TSR1	97	52.934	ENSMLEG00000036733	TSR1	95	53.255	Mandrillus_leucophaeus
ENSEBUG00000013731	TSR1	97	49.749	ENSMAMG00000017918	tsr1	94	51.131	Mastacembelus_armatus
ENSEBUG00000013731	TSR1	98	50.439	ENSMZEG00005007477	tsr1	95	51.253	Maylandia_zebra
ENSEBUG00000013731	TSR1	98	53.213	ENSMGAG00000005576	TSR1	96	53.470	Meleagris_gallopavo
ENSEBUG00000013731	TSR1	98	53.333	ENSMICG00000012943	TSR1	96	53.905	Microcebus_murinus
ENSEBUG00000013731	TSR1	98	52.828	ENSMOCG00000022764	Tsr1	96	52.956	Microtus_ochrogaster
ENSEBUG00000013731	TSR1	97	51.671	ENSMMOG00000014280	tsr1	94	52.699	Mola_mola
ENSEBUG00000013731	TSR1	98	54.113	ENSMODG00000010658	TSR1	96	54.370	Monodelphis_domestica
ENSEBUG00000013731	TSR1	97	50.508	ENSMALG00000011681	tsr1	94	51.904	Monopterus_albus
ENSEBUG00000013731	TSR1	97	52.880	MGP_CAROLIEiJ_G0016727	Tsr1	94	52.880	Mus_caroli
ENSEBUG00000013731	TSR1	98	52.510	ENSMUSG00000038335	Tsr1	96	52.510	Mus_musculus
ENSEBUG00000013731	TSR1	98	52.124	MGP_PahariEiJ_G0017864	Tsr1	96	52.124	Mus_pahari
ENSEBUG00000013731	TSR1	98	52.381	MGP_SPRETEiJ_G0017570	Tsr1	96	52.381	Mus_spretus
ENSEBUG00000013731	TSR1	83	54.642	ENSMPUG00000013000	TSR1	99	54.504	Mustela_putorius_furo
ENSEBUG00000013731	TSR1	98	53.273	ENSMLUG00000003505	TSR1	96	53.846	Myotis_lucifugus
ENSEBUG00000013731	TSR1	98	50.818	ENSNBRG00000020728	tsr1	95	51.950	Neolamprologus_brichardi
ENSEBUG00000013731	TSR1	97	49.347	ENSNLEG00000017184	TSR1	94	50.131	Nomascus_leucogenys
ENSEBUG00000013731	TSR1	98	48.780	ENSMEUG00000015828	TSR1	96	49.231	Notamacropus_eugenii
ENSEBUG00000013731	TSR1	98	51.637	ENSONIG00000013131	tsr1	95	51.950	Oreochromis_niloticus
ENSEBUG00000013731	TSR1	98	51.476	ENSOANG00000008637	TSR1	99	51.476	Ornithorhynchus_anatinus
ENSEBUG00000013731	TSR1	98	52.417	ENSOCUG00000014256	TSR1	96	52.986	Oryctolagus_cuniculus
ENSEBUG00000013731	TSR1	98	51.064	ENSORLG00000004926	tsr1	95	52.566	Oryzias_latipes
ENSEBUG00000013731	TSR1	98	51.443	ENSORLG00020008792	tsr1	95	52.321	Oryzias_latipes_hni
ENSEBUG00000013731	TSR1	98	51.064	ENSORLG00015013838	tsr1	95	52.566	Oryzias_latipes_hsok
ENSEBUG00000013731	TSR1	98	51.375	ENSOMEG00000004830	tsr1	95	52.750	Oryzias_melastigma
ENSEBUG00000013731	TSR1	96	52.062	ENSOGAG00000004492	TSR1	94	52.699	Otolemur_garnettii
ENSEBUG00000013731	TSR1	98	52.813	ENSOARG00000015437	TSR1	93	53.384	Ovis_aries
ENSEBUG00000013731	TSR1	97	52.987	ENSPPAG00000036355	TSR1	95	52.987	Pan_paniscus
ENSEBUG00000013731	TSR1	98	51.724	ENSPPRG00000015519	-	96	52.369	Panthera_pardus
ENSEBUG00000013731	TSR1	98	51.852	ENSPTIG00000010608	TSR1	96	52.497	Panthera_tigris_altaica
ENSEBUG00000013731	TSR1	97	52.987	ENSPTRG00000008547	TSR1	95	52.987	Pan_troglodytes
ENSEBUG00000013731	TSR1	97	51.044	ENSPANG00000024463	TSR1	95	51.567	Papio_anubis
ENSEBUG00000013731	TSR1	97	51.746	ENSPKIG00000013972	tsr1	94	52.135	Paramormyrops_kingsleyae
ENSEBUG00000013731	TSR1	87	52.762	ENSPSIG00000018258	TSR1	97	53.120	Pelodiscus_sinensis
ENSEBUG00000013731	TSR1	99	51.523	ENSPMGG00000011577	tsr1	95	51.523	Periophthalmus_magnuspinnatus
ENSEBUG00000013731	TSR1	98	51.160	ENSPEMG00000018033	Tsr1	96	51.737	Peromyscus_maniculatus_bairdii
ENSEBUG00000013731	TSR1	97	53.896	ENSPCIG00000009357	TSR1	92	54.557	Phascolarctos_cinereus
ENSEBUG00000013731	TSR1	97	50.379	ENSPFOG00000004483	TSR1	94	52.339	Poecilia_formosa
ENSEBUG00000013731	TSR1	97	50.639	ENSPLAG00000022320	tsr1	94	51.407	Poecilia_latipinna
ENSEBUG00000013731	TSR1	97	50.310	ENSPMEG00000004577	tsr1	94	51.629	Poecilia_mexicana
ENSEBUG00000013731	TSR1	96	50.126	ENSPREG00000010354	tsr1	91	51.592	Poecilia_reticulata
ENSEBUG00000013731	TSR1	97	49.098	ENSPPYG00000007792	TSR1	95	49.421	Pongo_abelii
ENSEBUG00000013731	TSR1	52	58.140	ENSPCAG00000012973	-	66	58.140	Procavia_capensis
ENSEBUG00000013731	TSR1	97	53.359	ENSPCOG00000017928	TSR1	95	53.618	Propithecus_coquereli
ENSEBUG00000013731	TSR1	98	53.488	ENSPVAG00000002162	TSR1	96	53.935	Pteropus_vampyrus
ENSEBUG00000013731	TSR1	98	50.879	ENSPNYG00000016163	tsr1	95	52.261	Pundamilia_nyererei
ENSEBUG00000013731	TSR1	98	49.146	ENSPNAG00000008659	tsr1	95	51.304	Pygocentrus_nattereri
ENSEBUG00000013731	TSR1	98	52.051	ENSRNOG00000002980	Tsr1	96	52.375	Rattus_norvegicus
ENSEBUG00000013731	TSR1	98	52.314	ENSRBIG00000040016	TSR1	96	52.314	Rhinopithecus_bieti
ENSEBUG00000013731	TSR1	98	52.314	ENSRROG00000030361	TSR1	96	52.314	Rhinopithecus_roxellana
ENSEBUG00000013731	TSR1	97	52.611	ENSSBOG00000020785	TSR1	95	53.264	Saimiri_boliviensis_boliviensis
ENSEBUG00000013731	TSR1	97	52.934	ENSSHAG00000011394	TSR1	95	54.237	Sarcophilus_harrisii
ENSEBUG00000013731	TSR1	98	51.207	ENSSFOG00015005455	tsr1	94	52.124	Scleropages_formosus
ENSEBUG00000013731	TSR1	97	50.126	ENSSMAG00000009504	tsr1	94	51.894	Scophthalmus_maximus
ENSEBUG00000013731	TSR1	97	51.075	ENSSDUG00000012074	tsr1	94	51.580	Seriola_dumerili
ENSEBUG00000013731	TSR1	97	51.458	ENSSLDG00000002031	tsr1	94	52.091	Seriola_lalandi_dorsalis
ENSEBUG00000013731	TSR1	86	66.912	ENSSARG00000000759	TSR1	80	66.912	Sorex_araneus
ENSEBUG00000013731	TSR1	98	53.905	ENSSPUG00000007042	TSR1	96	54.289	Sphenodon_punctatus
ENSEBUG00000013731	TSR1	97	51.828	ENSSPAG00000021951	tsr1	94	52.837	Stegastes_partitus
ENSEBUG00000013731	TSR1	98	53.747	ENSSSCG00000038534	TSR1	96	54.005	Sus_scrofa
ENSEBUG00000013731	TSR1	92	55.404	ENSTGUG00000005883	TSR1	100	55.149	Taeniopygia_guttata
ENSEBUG00000013731	TSR1	97	50.641	ENSTRUG00000004665	tsr1	94	51.975	Takifugu_rubripes
ENSEBUG00000013731	TSR1	98	51.970	ENSTNIG00000016196	tsr1	96	52.859	Tetraodon_nigroviridis
ENSEBUG00000013731	TSR1	68	73.810	ENSTBEG00000015275	-	63	73.810	Tupaia_belangeri
ENSEBUG00000013731	TSR1	97	53.394	ENSTTRG00000001177	TSR1	95	53.786	Tursiops_truncatus
ENSEBUG00000013731	TSR1	98	53.117	ENSUAMG00000025160	TSR1	95	53.636	Ursus_americanus
ENSEBUG00000013731	TSR1	98	52.067	ENSUMAG00000009294	TSR1	98	52.713	Ursus_maritimus
ENSEBUG00000013731	TSR1	82	46.296	ENSVPAG00000000228	TSR1	95	46.594	Vicugna_pacos
ENSEBUG00000013731	TSR1	97	52.926	ENSVVUG00000021767	TSR1	95	53.186	Vulpes_vulpes
ENSEBUG00000013731	TSR1	98	47.382	ENSXETG00000023797	tsr1	99	47.270	Xenopus_tropicalis
ENSEBUG00000013731	TSR1	97	51.403	ENSXCOG00000009635	tsr1	94	52.107	Xiphophorus_couchianus
ENSEBUG00000013731	TSR1	97	50.630	ENSXMAG00000001397	tsr1	91	51.511	Xiphophorus_maculatus