EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000013782 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4 (1 of many)
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Plus strand
Length
34853 bases
Position
chrFYBX02010575.1:1388201-1423053
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000022408PABPPF00658.186.9e-3211
ENSEBUP00000022370PABPPF00658.181e-3111
ENSEBUP00000022390RRM_1PF00076.228.6e-8814
ENSEBUP00000022390RRM_1PF00076.228.6e-8824
ENSEBUP00000022390RRM_1PF00076.228.6e-8834
ENSEBUP00000022390RRM_1PF00076.228.6e-8844
ENSEBUP00000022370RRM_1PF00076.229.4e-8814
ENSEBUP00000022370RRM_1PF00076.229.4e-8824
ENSEBUP00000022370RRM_1PF00076.229.4e-8834
ENSEBUP00000022370RRM_1PF00076.229.4e-8844
ENSEBUP00000022408RRM_1PF00076.222.3e-5413
ENSEBUP00000022408RRM_1PF00076.222.3e-5423
ENSEBUP00000022408RRM_1PF00076.222.3e-5433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000022945-5677-ENSEBUP00000022370622 (aa)--
ENSEBUT00000022966-5546-ENSEBUP00000022390603 (aa)--
ENSEBUT00000022984-4888-ENSEBUP00000022408512 (aa)--
Gene Model
Click here to download ENSEBUG00000013782's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013782's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000013782pabpc45936.111ENSEBUG00000001337rbm39a5036.111
ENSEBUG00000013782pabpc45937.931ENSEBUG00000007835-6537.931
ENSEBUG00000013782pabpc45236.782ENSEBUG00000008128-6436.782
ENSEBUG00000013782pabpc49976.592ENSEBUG00000000992pabpc49876.252
ENSEBUG00000013782pabpc46038.095ENSEBUG00000001843tia1l6038.095
ENSEBUG00000013782pabpc46537.037ENSEBUG00000016570HNRNPA05540.708
ENSEBUG00000013782pabpc45430.973ENSEBUG00000016008elavl29730.973
ENSEBUG00000013782pabpc46231.126ENSEBUG00000008179-8733.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000013782pabpc49976.108ENSG00000090621PABPC410095.349Homo_sapiens
ENSEBUG00000013782pabpc49976.752ENSAPOG00000001161pabpc49677.398Acanthochromis_polyacanthus
ENSEBUG00000013782pabpc49973.414ENSAMEG00000011535-9773.302Ailuropoda_melanoleuca
ENSEBUG00000013782pabpc49845.265ENSAMEG00000015083-9645.008Ailuropoda_melanoleuca
ENSEBUG00000013782pabpc49976.274ENSACIG00000023343pabpc49776.911Amphilophus_citrinellus
ENSEBUG00000013782pabpc49976.592ENSAOCG00000021529pabpc49677.236Amphiprion_ocellaris
ENSEBUG00000013782pabpc49976.592ENSAPEG00000019196pabpc49677.236Amphiprion_percula
ENSEBUG00000013782pabpc49976.630ENSATEG00000007402pabpc49677.110Anabas_testudineus
ENSEBUG00000013782pabpc49978.135ENSAPLG00000009729-9778.654Anas_platyrhynchos
ENSEBUG00000013782pabpc49976.114ENSACAG00000002544PABPC49776.277Anolis_carolinensis
ENSEBUG00000013782pabpc49976.108ENSANAG00000025079PABPC49776.898Aotus_nancymaae
ENSEBUG00000013782pabpc49977.083ENSACLG00000019558pabpc49677.236Astatotilapia_calliptera
ENSEBUG00000013782pabpc49973.913ENSAMXG00000018779pabpc49674.548Astyanax_mexicanus
ENSEBUG00000013782pabpc46082.036ENSBTAG00000048536-9382.036Bos_taurus
ENSEBUG00000013782pabpc49974.458ENSBTAG00000017125PABPC49774.092Bos_taurus
ENSEBUG00000013782pabpc49976.108ENSCJAG00000002512-9776.898Callithrix_jacchus
ENSEBUG00000013782pabpc47868.860ENSCJAG00000045953-8568.860Callithrix_jacchus
ENSEBUG00000013782pabpc49976.266ENSCAFG00000003081PABPC49776.898Canis_familiaris
ENSEBUG00000013782pabpc49973.565ENSCAFG00020004161PABPC49773.457Canis_lupus_dingo
ENSEBUG00000013782pabpc49960.535ENSCHIG00000023385-9760.835Capra_hircus
ENSEBUG00000013782pabpc49972.440ENSCHIG00000019398-9773.148Capra_hircus
ENSEBUG00000013782pabpc49976.582ENSTSYG00000006532PABPC49776.898Carlito_syrichta
ENSEBUG00000013782pabpc49975.676ENSCAPG00000015984PABPC49776.623Cavia_aperea
ENSEBUG00000013782pabpc49975.949ENSCPOG00000009552PABPC49776.898Cavia_porcellus
ENSEBUG00000013782pabpc49976.228ENSCCAG00000037306PABPC49777.023Cebus_capucinus
ENSEBUG00000013782pabpc49976.108ENSCATG00000042164PABPC49776.898Cercocebus_atys
ENSEBUG00000013782pabpc49975.949ENSCLAG00000011899PABPC49776.898Chinchilla_lanigera
ENSEBUG00000013782pabpc49972.466ENSCSAG00000001135PABPC49773.457Chlorocebus_sabaeus
ENSEBUG00000013782pabpc48582.105ENSCHOG00000005327PABPC47686.585Choloepus_hoffmanni
ENSEBUG00000013782pabpc49978.639ENSCPBG00000001038PABPC49778.837Chrysemys_picta_bellii
ENSEBUG00000013782pabpc49976.083ENSCANG00000034177PABPC49776.885Colobus_angolensis_palliatus
ENSEBUG00000013782pabpc49976.404ENSCGRG00001018166Pabpc49676.384Cricetulus_griseus_chok1gshd
ENSEBUG00000013782pabpc49976.547ENSCGRG00000009777Pabpc49676.529Cricetulus_griseus_crigri
ENSEBUG00000013782pabpc49976.433ENSCSEG00000000130pabpc49676.911Cynoglossus_semilaevis
ENSEBUG00000013782pabpc49977.236ENSCVAG00000019246pabpc49777.393Cyprinodon_variegatus
ENSEBUG00000013782pabpc49977.157ENSDARG00000059259pabpc49977.446Danio_rerio
ENSEBUG00000013782pabpc49973.975ENSDNOG00000018444-9774.818Dasypus_novemcinctus
ENSEBUG00000013782pabpc49974.884ENSDORG00000011581Pabpc49774.367Dipodomys_ordii
ENSEBUG00000013782pabpc49648.703ENSETEG00000009172-9648.204Echinops_telfairi
ENSEBUG00000013782pabpc49992.188ENSETEG00000018453-8292.188Echinops_telfairi
ENSEBUG00000013782pabpc49972.741ENSEASG00005014119PABPC49773.457Equus_asinus_asinus
ENSEBUG00000013782pabpc49972.741ENSECAG00000009396PABPC49773.457Equus_caballus
ENSEBUG00000013782pabpc49872.265ENSEEUG00000002962PABPC49773.333Erinaceus_europaeus
ENSEBUG00000013782pabpc49977.244ENSELUG00000003195pabpc49677.398Esox_lucius
ENSEBUG00000013782pabpc49976.266ENSFCAG00000015254-9776.898Felis_catus
ENSEBUG00000013782pabpc49977.690ENSFALG00000000543PABPC49778.191Ficedula_albicollis
ENSEBUG00000013782pabpc49646.795ENSFDAG00000010581-9645.826Fukomys_damarensis
ENSEBUG00000013782pabpc49972.466ENSFDAG00000020016-9773.302Fukomys_damarensis
ENSEBUG00000013782pabpc49976.433ENSFHEG00000007548pabpc49777.073Fundulus_heteroclitus
ENSEBUG00000013782pabpc49976.367ENSGMOG00000019025pabpc49577.011Gadus_morhua
ENSEBUG00000013782pabpc49977.725ENSGALG00000003800PABPC49778.191Gallus_gallus
ENSEBUG00000013782pabpc49976.752ENSGAFG00000018195pabpc49593.333Gambusia_affinis
ENSEBUG00000013782pabpc49976.433ENSGACG00000007179pabpc49776.461Gasterosteus_aculeatus
ENSEBUG00000013782pabpc49979.114ENSGAGG00000001888PABPC49779.321Gopherus_agassizii
ENSEBUG00000013782pabpc49976.108ENSGGOG00000004002PABPC49776.898Gorilla_gorilla
ENSEBUG00000013782pabpc49977.083ENSHBUG00000020206pabpc49677.236Haplochromis_burtoni
ENSEBUG00000013782pabpc49975.791ENSHGLG00000011162PABPC49776.737Heterocephalus_glaber_female
ENSEBUG00000013782pabpc49975.791ENSHGLG00100001580PABPC49776.737Heterocephalus_glaber_male
ENSEBUG00000013782pabpc49975.637ENSHCOG00000012694pabpc49676.748Hippocampus_comes
ENSEBUG00000013782pabpc49877.778ENSIPUG00000016620pabpc49777.796Ictalurus_punctatus
ENSEBUG00000013782pabpc49976.077ENSSTOG00000010416PABPC49776.585Ictidomys_tridecemlineatus
ENSEBUG00000013782pabpc49974.224ENSJJAG00000007781Pabpc49773.851Jaculus_jaculus
ENSEBUG00000013782pabpc49976.349ENSKMAG00000013597pabpc49776.661Kryptolebias_marmoratus
ENSEBUG00000013782pabpc49976.667ENSLBEG00000013654pabpc49677.310Labrus_bergylta
ENSEBUG00000013782pabpc49978.165ENSLACG00000011907PABPC49778.837Latimeria_chalumnae
ENSEBUG00000013782pabpc49978.309ENSLOCG00000001877pabpc49678.664Lepisosteus_oculatus
ENSEBUG00000013782pabpc49975.758ENSLAFG00000000151PABPC49776.423Loxodonta_africana
ENSEBUG00000013782pabpc49976.108ENSMFAG00000041481PABPC49776.898Macaca_fascicularis
ENSEBUG00000013782pabpc49972.466ENSMMUG00000007497PABPC49773.457Macaca_mulatta
ENSEBUG00000013782pabpc49976.108ENSMNEG00000043054PABPC49776.898Macaca_nemestrina
ENSEBUG00000013782pabpc49976.108ENSMLEG00000040716PABPC49776.898Mandrillus_leucophaeus
ENSEBUG00000013782pabpc49976.911ENSMAMG00000010025pabpc49878.037Mastacembelus_armatus
ENSEBUG00000013782pabpc49976.433ENSMZEG00005006141pabpc49677.073Maylandia_zebra
ENSEBUG00000013782pabpc49972.835ENSMGAG00000005408PABPC49773.438Meleagris_gallopavo
ENSEBUG00000013782pabpc47567.907ENSMAUG00000001295-9767.907Mesocricetus_auratus
ENSEBUG00000013782pabpc46080.240ENSMAUG00000004089-8980.240Mesocricetus_auratus
ENSEBUG00000013782pabpc49577.500ENSMAUG00000019763-9567.173Mesocricetus_auratus
ENSEBUG00000013782pabpc49967.387ENSMICG00000036729-9766.904Microcebus_murinus
ENSEBUG00000013782pabpc49274.643ENSMICG00000016633-10074.823Microcebus_murinus
ENSEBUG00000013782pabpc49975.911ENSMOCG00000006763Pabpc49776.737Microtus_ochrogaster
ENSEBUG00000013782pabpc49975.641ENSMMOG00000002363pabpc49675.935Mola_mola
ENSEBUG00000013782pabpc45350.000ENSMODG00000019847-6676.596Monodelphis_domestica
ENSEBUG00000013782pabpc49875.193ENSMODG00000017657-9775.349Monodelphis_domestica
ENSEBUG00000013782pabpc46366.755ENSMODG00000018051-9866.755Monodelphis_domestica
ENSEBUG00000013782pabpc49976.190ENSMALG00000011017pabpc49776.661Monopterus_albus
ENSEBUG00000013782pabpc49972.139MGP_CAROLIEiJ_G0026435-10095.035Mus_caroli
ENSEBUG00000013782pabpc49965.157MGP_CAROLIEiJ_G0024864-9765.419Mus_caroli
ENSEBUG00000013782pabpc49975.633ENSMUSG00000011257Pabpc410093.452Mus_musculus
ENSEBUG00000013782pabpc49972.519MGP_PahariEiJ_G0028765Pabpc410095.745Mus_pahari
ENSEBUG00000013782pabpc49966.412MGP_SPRETEiJ_G0027415Pabpc410095.035Mus_spretus
ENSEBUG00000013782pabpc49973.222ENSMPUG00000014414-9773.457Mustela_putorius_furo
ENSEBUG00000013782pabpc49643.729ENSMPUG00000006836-10043.729Mustela_putorius_furo
ENSEBUG00000013782pabpc49975.758ENSMLUG00000012068PABPC49776.423Myotis_lucifugus
ENSEBUG00000013782pabpc49975.758ENSNGAG00000018292Pabpc49776.423Nannospalax_galili
ENSEBUG00000013782pabpc47078.090ENSNBRG00000010047-7578.090Neolamprologus_brichardi
ENSEBUG00000013782pabpc46390.385ENSNBRG00000009708pabpc49890.385Neolamprologus_brichardi
ENSEBUG00000013782pabpc49976.108ENSNLEG00000011928PABPC49776.898Nomascus_leucogenys
ENSEBUG00000013782pabpc48688.889ENSOPRG00000011984PABPC48688.889Ochotona_princeps
ENSEBUG00000013782pabpc49865.063ENSODEG00000017434-9665.161Octodon_degus
ENSEBUG00000013782pabpc49975.949ENSODEG00000006592-9776.252Octodon_degus
ENSEBUG00000013782pabpc45582.143ENSODEG00000013457-10082.143Octodon_degus
ENSEBUG00000013782pabpc49977.083ENSONIG00000008176pabpc49677.236Oreochromis_niloticus
ENSEBUG00000013782pabpc49979.014ENSOANG00000010001PABPC49779.221Ornithorhynchus_anatinus
ENSEBUG00000013782pabpc49672.100ENSOCUG00000000562PABPC48872.884Oryctolagus_cuniculus
ENSEBUG00000013782pabpc49984.877ENSORLG00000017479pabpc49684.615Oryzias_latipes
ENSEBUG00000013782pabpc49984.877ENSORLG00020018644pabpc49684.615Oryzias_latipes_hni
ENSEBUG00000013782pabpc49984.877ENSORLG00015015042pabpc49684.615Oryzias_latipes_hsok
ENSEBUG00000013782pabpc49976.274ENSOMEG00000014410pabpc49676.748Oryzias_melastigma
ENSEBUG00000013782pabpc49974.228ENSOGAG00000004067PABPC49774.331Otolemur_garnettii
ENSEBUG00000013782pabpc49972.440ENSOARG00000020060PABPC49773.148Ovis_aries
ENSEBUG00000013782pabpc49976.108ENSPPAG00000043625PABPC49776.898Pan_paniscus
ENSEBUG00000013782pabpc49976.266ENSPPRG00000024727PABPC49776.898Panthera_pardus
ENSEBUG00000013782pabpc49976.266ENSPTIG00000005829PABPC49776.898Panthera_tigris_altaica
ENSEBUG00000013782pabpc49976.108ENSPTRG00000000573PABPC49776.898Pan_troglodytes
ENSEBUG00000013782pabpc49975.949ENSPANG00000009484PABPC49776.737Papio_anubis
ENSEBUG00000013782pabpc49977.157ENSPKIG00000025356pabpc49876.809Paramormyrops_kingsleyae
ENSEBUG00000013782pabpc49978.956ENSPSIG00000016892PABPC49779.160Pelodiscus_sinensis
ENSEBUG00000013782pabpc49975.000ENSPMGG00000009073pabpc49675.122Periophthalmus_magnuspinnatus
ENSEBUG00000013782pabpc49975.949ENSPEMG00000023569-9776.737Peromyscus_maniculatus_bairdii
ENSEBUG00000013782pabpc49973.783ENSPEMG00000024193-9774.677Peromyscus_maniculatus_bairdii
ENSEBUG00000013782pabpc49281.261ENSPMAG00000002836pabpc410081.818Petromyzon_marinus
ENSEBUG00000013782pabpc49770.782ENSPMAG00000007885pabpc49770.782Petromyzon_marinus
ENSEBUG00000013782pabpc49878.652ENSPCIG00000020674PABPC49778.837Phascolarctos_cinereus
ENSEBUG00000013782pabpc49976.911ENSPFOG00000002682pabpc49777.724Poecilia_formosa
ENSEBUG00000013782pabpc49976.752ENSPLAG00000010112pabpc49777.561Poecilia_latipinna
ENSEBUG00000013782pabpc49977.404ENSPMEG00000019739pabpc49777.724Poecilia_mexicana
ENSEBUG00000013782pabpc49976.752ENSPREG00000001589pabpc49777.398Poecilia_reticulata
ENSEBUG00000013782pabpc49972.466ENSPPYG00000001506PABPC49773.457Pongo_abelii
ENSEBUG00000013782pabpc49968.825ENSPCAG00000003341PABPC49769.444Procavia_capensis
ENSEBUG00000013782pabpc49962.544ENSPCOG00000025882-9762.749Propithecus_coquereli
ENSEBUG00000013782pabpc49976.145ENSPCOG00000023725-9776.774Propithecus_coquereli
ENSEBUG00000013782pabpc49970.973ENSPVAG00000002187PABPC49771.184Pteropus_vampyrus
ENSEBUG00000013782pabpc49977.083ENSPNYG00000006134pabpc49677.236Pundamilia_nyererei
ENSEBUG00000013782pabpc49976.763ENSPNAG00000024355pabpc49677.451Pygocentrus_nattereri
ENSEBUG00000013782pabpc49974.729ENSRNOG00000015642Pabpc49774.209Rattus_norvegicus
ENSEBUG00000013782pabpc49973.178ENSRNOG00000028592AABR07035074.19772.627Rattus_norvegicus
ENSEBUG00000013782pabpc49976.108ENSRBIG00000039761PABPC49776.898Rhinopithecus_bieti
ENSEBUG00000013782pabpc49976.108ENSRROG00000033355PABPC49776.898Rhinopithecus_roxellana
ENSEBUG00000013782pabpc49976.070ENSSBOG00000026193PABPC49776.861Saimiri_boliviensis_boliviensis
ENSEBUG00000013782pabpc49878.652ENSSHAG00000018139PABPC49778.837Sarcophilus_harrisii
ENSEBUG00000013782pabpc49976.821ENSSFOG00015023514pabpc49677.534Scleropages_formosus
ENSEBUG00000013782pabpc49977.070ENSSMAG00000009007pabpc49677.561Scophthalmus_maximus
ENSEBUG00000013782pabpc49976.752ENSSDUG00000012683pabpc49677.236Seriola_dumerili
ENSEBUG00000013782pabpc49976.752ENSSLDG00000013025pabpc49677.236Seriola_lalandi_dorsalis
ENSEBUG00000013782pabpc49967.020ENSSARG00000000310PABPC49766.821Sorex_araneus
ENSEBUG00000013782pabpc49977.671ENSSPUG00000003204PABPC49778.211Sphenodon_punctatus
ENSEBUG00000013782pabpc49976.592ENSSPAG00000009252pabpc49677.073Stegastes_partitus
ENSEBUG00000013782pabpc49639.078ENSSSCG00000036170-9841.152Sus_scrofa
ENSEBUG00000013782pabpc49975.949ENSSSCG00000003660-9776.737Sus_scrofa
ENSEBUG00000013782pabpc49974.661ENSTGUG00000001266PABPC49774.615Taeniopygia_guttata
ENSEBUG00000013782pabpc49977.229ENSTRUG00000005907pabpc49677.398Takifugu_rubripes
ENSEBUG00000013782pabpc49973.428ENSTNIG00000016902pabpc49773.259Tetraodon_nigroviridis
ENSEBUG00000013782pabpc49862.416ENSTBEG00000009035PABPC49762.607Tupaia_belangeri
ENSEBUG00000013782pabpc49855.133ENSTTRG00000014340PABPC49761.750Tursiops_truncatus
ENSEBUG00000013782pabpc49976.266ENSUAMG00000000303PABPC49776.898Ursus_americanus
ENSEBUG00000013782pabpc48788.421ENSUMAG00000019585PABPC49792.683Ursus_maritimus
ENSEBUG00000013782pabpc47665.487ENSVPAG00000010041PABPC47265.487Vicugna_pacos
ENSEBUG00000013782pabpc49976.266ENSVVUG00000005215PABPC49776.898Vulpes_vulpes
ENSEBUG00000013782pabpc49975.633ENSXETG00000010946pabpc49776.090Xenopus_tropicalis
ENSEBUG00000013782pabpc46193.452ENSXETG00000027221-10093.452Xenopus_tropicalis
ENSEBUG00000013782pabpc49975.088ENSXCOG00000013190pabpc49683.491Xiphophorus_couchianus
ENSEBUG00000013782pabpc49977.404ENSXMAG00000019007pabpc49777.561Xiphophorus_maculatus

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