EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000013795 (Gene tree)
Gene ID: -
Gene Symbol: imp4 (1 of many)
Alias: zgc:86740
Full Name: IMP4%2C U3 small nucleolar ribonucleoprotein%2C homolog (yeast)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 5560 bases
Position: chrFYBX02010157.1:635881-641440
Accession: ZDB-GENE-040718-474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000022391	Brix	PF04427.18	4.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000022967	-	573	-	ENSEBUP00000022391	190 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000013795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000013795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000013795	imp4	76	67.361	ENSAMEG00000002918	IMP4	50	66.438	Ailuropoda_melanoleuca
ENSEBUG00000013795	imp4	74	40.141	ENSAMEG00000008531	RPF1	61	40.141	Ailuropoda_melanoleuca
ENSEBUG00000013795	imp4	76	72.222	ENSACIG00000010761	imp4	54	72.222	Amphilophus_citrinellus
ENSEBUG00000013795	imp4	74	38.028	ENSAPLG00000016382	RPF1	51	38.028	Anas_platyrhynchos
ENSEBUG00000013795	imp4	75	52.113	ENSANAG00000026010	-	50	51.389	Aotus_nancymaae
ENSEBUG00000013795	imp4	76	68.056	ENSANAG00000025384	-	50	67.123	Aotus_nancymaae
ENSEBUG00000013795	imp4	76	75.172	ENSAMXG00000009639	imp4	50	75.172	Astyanax_mexicanus
ENSEBUG00000013795	imp4	76	68.056	ENSBTAG00000003225	IMP4	50	67.123	Bos_taurus
ENSEBUG00000013795	imp4	76	68.056	ENSCJAG00000004623	IMP4	50	67.123	Callithrix_jacchus
ENSEBUG00000013795	imp4	75	69.231	ENSCAFG00000031902	IMP4	50	67.808	Canis_familiaris
ENSEBUG00000013795	imp4	75	69.231	ENSCAFG00020003191	-	54	67.808	Canis_lupus_dingo
ENSEBUG00000013795	imp4	76	67.361	ENSCHIG00000027227	IMP4	50	66.438	Capra_hircus
ENSEBUG00000013795	imp4	76	51.389	ENSTSYG00000010060	IMP4	50	52.055	Carlito_syrichta
ENSEBUG00000013795	imp4	74	39.437	ENSCAPG00000011740	RPF1	65	39.437	Cavia_aperea
ENSEBUG00000013795	imp4	76	69.444	ENSCAPG00000013416	IMP4	84	68.493	Cavia_aperea
ENSEBUG00000013795	imp4	76	69.444	ENSCPOG00000025730	IMP4	69	68.493	Cavia_porcellus
ENSEBUG00000013795	imp4	76	68.750	ENSCCAG00000021659	IMP4	50	67.808	Cebus_capucinus
ENSEBUG00000013795	imp4	76	69.444	ENSCATG00000034658	IMP4	50	68.493	Cercocebus_atys
ENSEBUG00000013795	imp4	76	69.444	ENSCLAG00000003199	IMP4	50	68.493	Chinchilla_lanigera
ENSEBUG00000013795	imp4	76	70.139	ENSCSAG00000016928	IMP4	50	69.178	Chlorocebus_sabaeus
ENSEBUG00000013795	imp4	76	68.750	ENSCHOG00000009212	IMP4	50	67.808	Choloepus_hoffmanni
ENSEBUG00000013795	imp4	67	38.760	ENSCHOG00000011775	-	60	38.462	Choloepus_hoffmanni
ENSEBUG00000013795	imp4	73	42.143	ENSCSAVG00000003642	-	67	42.143	Ciona_savignyi
ENSEBUG00000013795	imp4	76	70.139	ENSCGRG00001010494	Imp4	50	69.178	Cricetulus_griseus_chok1gshd
ENSEBUG00000013795	imp4	76	70.139	ENSCGRG00000017820	Imp4	50	69.178	Cricetulus_griseus_crigri
ENSEBUG00000013795	imp4	76	71.724	ENSCVAG00000011844	imp4	50	71.724	Cyprinodon_variegatus
ENSEBUG00000013795	imp4	76	68.750	ENSDORG00000010685	Imp4	50	67.808	Dipodomys_ordii
ENSEBUG00000013795	imp4	76	70.139	ENSETEG00000016200	IMP4	64	69.178	Echinops_telfairi
ENSEBUG00000013795	imp4	75	67.832	ENSEASG00005007002	IMP4	50	66.438	Equus_asinus_asinus
ENSEBUG00000013795	imp4	75	67.832	ENSECAG00000009529	IMP4	50	66.438	Equus_caballus
ENSEBUG00000013795	imp4	74	38.028	ENSEEUG00000014950	-	62	38.028	Erinaceus_europaeus
ENSEBUG00000013795	imp4	76	68.056	ENSEEUG00000006342	IMP4	50	67.123	Erinaceus_europaeus
ENSEBUG00000013795	imp4	75	67.133	ENSFCAG00000031008	IMP4	50	65.753	Felis_catus
ENSEBUG00000013795	imp4	76	69.444	ENSFDAG00000014358	IMP4	50	68.493	Fukomys_damarensis
ENSEBUG00000013795	imp4	76	73.611	ENSFHEG00000022246	imp4	53	73.611	Fundulus_heteroclitus
ENSEBUG00000013795	imp4	76	73.611	ENSGAFG00000013585	imp4	61	73.611	Gambusia_affinis
ENSEBUG00000013795	imp4	76	69.444	ENSGGOG00000001595	IMP4	50	68.493	Gorilla_gorilla
ENSEBUG00000013795	imp4	76	69.444	ENSHGLG00000017709	IMP4	50	68.493	Heterocephalus_glaber_female
ENSEBUG00000013795	imp4	76	69.444	ENSHGLG00100015453	IMP4	50	68.493	Heterocephalus_glaber_male
ENSEBUG00000013795	imp4	76	69.444	ENSSTOG00000003373	IMP4	50	68.493	Ictidomys_tridecemlineatus
ENSEBUG00000013795	imp4	83	51.553	ENSJJAG00000016616	-	52	54.861	Jaculus_jaculus
ENSEBUG00000013795	imp4	76	69.444	ENSJJAG00000010983	-	50	68.493	Jaculus_jaculus
ENSEBUG00000013795	imp4	76	69.444	ENSMFAG00000045624	IMP4	50	68.493	Macaca_fascicularis
ENSEBUG00000013795	imp4	76	69.444	ENSMMUG00000009615	IMP4	50	68.493	Macaca_mulatta
ENSEBUG00000013795	imp4	76	69.444	ENSMNEG00000044179	IMP4	50	68.493	Macaca_nemestrina
ENSEBUG00000013795	imp4	76	69.444	ENSMLEG00000039076	IMP4	57	68.493	Mandrillus_leucophaeus
ENSEBUG00000013795	imp4	76	72.222	ENSMAMG00000019500	imp4	54	72.222	Mastacembelus_armatus
ENSEBUG00000013795	imp4	74	36.620	ENSMGAG00000009207	RPF1	52	36.620	Meleagris_gallopavo
ENSEBUG00000013795	imp4	76	68.056	ENSMAUG00000021757	Imp4	50	67.123	Mesocricetus_auratus
ENSEBUG00000013795	imp4	76	68.750	ENSMICG00000011797	IMP4	50	67.808	Microcebus_murinus
ENSEBUG00000013795	imp4	76	70.139	ENSMOCG00000014058	Imp4	50	69.178	Microtus_ochrogaster
ENSEBUG00000013795	imp4	76	60.417	ENSMMOG00000009454	imp4	53	60.417	Mola_mola
ENSEBUG00000013795	imp4	75	68.531	ENSMODG00000010577	IMP4	50	67.586	Monodelphis_domestica
ENSEBUG00000013795	imp4	74	38.732	MGP_CAROLIEiJ_G0025726	Rpf1	86	39.062	Mus_caroli
ENSEBUG00000013795	imp4	76	69.444	MGP_CAROLIEiJ_G0014021	Imp4	50	68.493	Mus_caroli
ENSEBUG00000013795	imp4	76	69.444	ENSMUSG00000026127	Imp4	50	68.493	Mus_musculus
ENSEBUG00000013795	imp4	74	39.437	ENSMUSG00000028187	Rpf1	86	39.844	Mus_musculus
ENSEBUG00000013795	imp4	74	39.437	MGP_PahariEiJ_G0027177	-	88	39.535	Mus_pahari
ENSEBUG00000013795	imp4	76	69.444	MGP_PahariEiJ_G0027267	Imp4	50	68.493	Mus_pahari
ENSEBUG00000013795	imp4	76	69.444	MGP_SPRETEiJ_G0014826	Imp4	50	68.493	Mus_spretus
ENSEBUG00000013795	imp4	74	39.437	MGP_SPRETEiJ_G0026679	Rpf1	86	39.844	Mus_spretus
ENSEBUG00000013795	imp4	54	38.095	ENSMPUG00000017587	-	81	38.095	Mustela_putorius_furo
ENSEBUG00000013795	imp4	76	65.972	ENSMPUG00000013257	IMP4	50	65.068	Mustela_putorius_furo
ENSEBUG00000013795	imp4	76	68.750	ENSNGAG00000013073	Imp4	50	67.808	Nannospalax_galili
ENSEBUG00000013795	imp4	76	72.222	ENSNBRG00000012538	imp4	54	72.222	Neolamprologus_brichardi
ENSEBUG00000013795	imp4	76	70.139	ENSNLEG00000010574	IMP4	50	69.178	Nomascus_leucogenys
ENSEBUG00000013795	imp4	75	67.832	ENSMEUG00000008058	IMP4	50	66.897	Notamacropus_eugenii
ENSEBUG00000013795	imp4	76	70.833	ENSODEG00000003380	IMP4	50	69.863	Octodon_degus
ENSEBUG00000013795	imp4	76	75.000	ENSOANG00000014598	IMP4	50	73.973	Ornithorhynchus_anatinus
ENSEBUG00000013795	imp4	74	38.732	ENSOANG00000009012	-	61	38.732	Ornithorhynchus_anatinus
ENSEBUG00000013795	imp4	76	70.139	ENSOCUG00000002845	IMP4	50	69.178	Oryctolagus_cuniculus
ENSEBUG00000013795	imp4	76	57.534	ENSOARG00000015820	IMP4	50	58.389	Ovis_aries
ENSEBUG00000013795	imp4	76	69.444	ENSPPAG00000028871	IMP4	50	68.493	Pan_paniscus
ENSEBUG00000013795	imp4	75	67.133	ENSPPRG00000010574	IMP4	50	65.753	Panthera_pardus
ENSEBUG00000013795	imp4	75	67.133	ENSPTIG00000010892	IMP4	50	65.753	Panthera_tigris_altaica
ENSEBUG00000013795	imp4	76	69.444	ENSPTRG00000012451	IMP4	53	68.493	Pan_troglodytes
ENSEBUG00000013795	imp4	76	70.139	ENSPANG00000022510	IMP4	50	69.178	Papio_anubis
ENSEBUG00000013795	imp4	75	67.133	ENSPCIG00000027960	IMP4	50	66.207	Phascolarctos_cinereus
ENSEBUG00000013795	imp4	76	69.444	ENSPPYG00000013379	IMP4	50	68.493	Pongo_abelii
ENSEBUG00000013795	imp4	75	67.133	ENSPCAG00000010892	IMP4	67	65.753	Procavia_capensis
ENSEBUG00000013795	imp4	76	69.444	ENSPCOG00000017902	IMP4	50	68.493	Propithecus_coquereli
ENSEBUG00000013795	imp4	75	65.734	ENSPVAG00000006066	IMP4	50	64.384	Pteropus_vampyrus
ENSEBUG00000013795	imp4	76	72.917	ENSPNAG00000010913	imp4	51	72.917	Pygocentrus_nattereri
ENSEBUG00000013795	imp4	76	69.444	ENSRNOG00000013285	Imp4	50	68.493	Rattus_norvegicus
ENSEBUG00000013795	imp4	76	52.778	ENSRBIG00000018905	-	54	51.370	Rhinopithecus_bieti
ENSEBUG00000013795	imp4	76	53.472	ENSRROG00000043586	-	54	52.740	Rhinopithecus_roxellana
ENSEBUG00000013795	imp4	76	55.479	ENSRROG00000031291	-	57	54.730	Rhinopithecus_roxellana
ENSEBUG00000013795	imp4	76	68.750	ENSRROG00000031770	IMP4	50	67.808	Rhinopithecus_roxellana
ENSEBUG00000013795	imp4	76	68.750	ENSSBOG00000025841	IMP4	50	67.808	Saimiri_boliviensis_boliviensis
ENSEBUG00000013795	imp4	73	64.493	ENSSHAG00000015070	-	50	62.069	Sarcophilus_harrisii
ENSEBUG00000013795	imp4	75	66.434	ENSSHAG00000008267	-	50	65.517	Sarcophilus_harrisii
ENSEBUG00000013795	imp4	74	37.324	ENSSHAG00000017559	RPF1	51	37.324	Sarcophilus_harrisii
ENSEBUG00000013795	imp4	74	48.227	ENSSHAG00000016855	-	54	51.128	Sarcophilus_harrisii
ENSEBUG00000013795	imp4	76	69.444	ENSSSCG00000015734	IMP4	50	68.493	Sus_scrofa
ENSEBUG00000013795	imp4	74	38.028	ENSTBEG00000012664	-	64	37.415	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000002184	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000016624	-	80	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.028	ENSTBEG00000004594	-	64	37.415	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000001224	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000009578	-	77	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000002725	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000002036	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000001587	-	72	38.732	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000015252	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000010766	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000000334	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000002870	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	76	67.361	ENSTBEG00000009881	IMP4	50	66.438	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000009181	-	64	38.095	Tupaia_belangeri
ENSEBUG00000013795	imp4	74	38.732	ENSTBEG00000006669	-	68	38.732	Tupaia_belangeri
ENSEBUG00000013795	imp4	76	69.444	ENSTTRG00000012590	IMP4	50	68.493	Tursiops_truncatus
ENSEBUG00000013795	imp4	76	67.361	ENSUAMG00000027326	IMP4	50	66.438	Ursus_americanus
ENSEBUG00000013795	imp4	76	67.361	ENSUMAG00000013874	IMP4	50	66.438	Ursus_maritimus
ENSEBUG00000013795	imp4	75	68.531	ENSVVUG00000005007	IMP4	50	67.123	Vulpes_vulpes