EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000014080 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 20291 bases
Position: chrFYBX02006035.1:2149772-2170062
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000022847	Sua5_yciO_yrdC	PF01300.18	1.3e-48	1	1
ENSEBUP00000022864	Sua5_yciO_yrdC	PF01300.18	1.3e-48	1	1
ENSEBUP00000022886	Sua5_yciO_yrdC	PF01300.18	1.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000023423	-	4688	-	ENSEBUP00000022847	237 (aa)	-	-
ENSEBUT00000023462	-	3713	-	ENSEBUP00000022886	237 (aa)	-	-
ENSEBUT00000023440	-	4540	-	ENSEBUP00000022864	237 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014080	yrdc	95	51.739	ENSG00000196449	YRDC	82	51.739	Homo_sapiens
ENSEBUG00000014080	yrdc	99	48.729	ENSAPOG00000024293	yrdc	90	48.729	Acanthochromis_polyacanthus
ENSEBUG00000014080	yrdc	77	55.615	ENSAMEG00000001173	YRDC	99	55.615	Ailuropoda_melanoleuca
ENSEBUG00000014080	yrdc	99	51.915	ENSACIG00000017330	yrdc	88	51.915	Amphilophus_citrinellus
ENSEBUG00000014080	yrdc	99	50.000	ENSAOCG00000021647	yrdc	90	50.000	Amphiprion_ocellaris
ENSEBUG00000014080	yrdc	99	49.576	ENSAPEG00000006164	yrdc	90	49.576	Amphiprion_percula
ENSEBUG00000014080	yrdc	94	51.982	ENSATEG00000010086	yrdc	83	51.982	Anabas_testudineus
ENSEBUG00000014080	yrdc	80	56.186	ENSACAG00000017203	YRDC	94	55.779	Anolis_carolinensis
ENSEBUG00000014080	yrdc	82	55.276	ENSANAG00000028788	-	85	55.276	Aotus_nancymaae
ENSEBUG00000014080	yrdc	95	49.138	ENSANAG00000031052	-	84	49.138	Aotus_nancymaae
ENSEBUG00000014080	yrdc	99	50.000	ENSACLG00000027775	yrdc	87	50.000	Astatotilapia_calliptera
ENSEBUG00000014080	yrdc	97	51.293	ENSAMXG00000037791	yrdc	87	52.113	Astyanax_mexicanus
ENSEBUG00000014080	yrdc	95	52.174	ENSBTAG00000006510	YRDC	83	52.174	Bos_taurus
ENSEBUG00000014080	yrdc	78	43.386	WBGene00012997	Y48C3A.18	90	44.615	Caenorhabditis_elegans
ENSEBUG00000014080	yrdc	95	51.739	ENSCJAG00000002078	YRDC	63	51.739	Callithrix_jacchus
ENSEBUG00000014080	yrdc	98	51.681	ENSCAFG00000003253	YRDC	87	51.681	Canis_familiaris
ENSEBUG00000014080	yrdc	98	52.521	ENSCAFG00020007843	YRDC	87	52.521	Canis_lupus_dingo
ENSEBUG00000014080	yrdc	95	52.174	ENSCHIG00000007882	YRDC	83	52.174	Capra_hircus
ENSEBUG00000014080	yrdc	70	56.140	ENSTSYG00000005555	YRDC	61	56.140	Carlito_syrichta
ENSEBUG00000014080	yrdc	92	53.153	ENSCPOG00000036144	YRDC	80	53.153	Cavia_porcellus
ENSEBUG00000014080	yrdc	95	51.739	ENSCCAG00000028891	YRDC	82	51.739	Cebus_capucinus
ENSEBUG00000014080	yrdc	95	51.304	ENSCATG00000036928	YRDC	82	51.739	Cercocebus_atys
ENSEBUG00000014080	yrdc	95	51.739	ENSCLAG00000015012	YRDC	82	51.739	Chinchilla_lanigera
ENSEBUG00000014080	yrdc	95	51.304	ENSCSAG00000001116	YRDC	82	51.739	Chlorocebus_sabaeus
ENSEBUG00000014080	yrdc	67	53.750	ENSCHOG00000005500	YRDC	76	53.750	Choloepus_hoffmanni
ENSEBUG00000014080	yrdc	84	51.707	ENSCPBG00000018446	YRDC	88	51.707	Chrysemys_picta_bellii
ENSEBUG00000014080	yrdc	81	49.515	ENSCING00000007564	-	94	49.515	Ciona_intestinalis
ENSEBUG00000014080	yrdc	81	48.039	ENSCSAVG00000009982	-	94	48.039	Ciona_savignyi
ENSEBUG00000014080	yrdc	95	51.304	ENSCANG00000031111	YRDC	82	51.739	Colobus_angolensis_palliatus
ENSEBUG00000014080	yrdc	94	47.577	ENSCGRG00001000829	-	63	47.577	Cricetulus_griseus_chok1gshd
ENSEBUG00000014080	yrdc	94	51.982	ENSCGRG00001014496	-	82	51.304	Cricetulus_griseus_chok1gshd
ENSEBUG00000014080	yrdc	92	51.293	ENSCSEG00000019075	yrdc	85	51.293	Cynoglossus_semilaevis
ENSEBUG00000014080	yrdc	95	49.778	ENSCVAG00000017355	yrdc	85	49.778	Cyprinodon_variegatus
ENSEBUG00000014080	yrdc	99	47.679	ENSDARG00000041428	yrdc	97	48.696	Danio_rerio
ENSEBUG00000014080	yrdc	94	51.982	ENSDNOG00000038789	-	82	52.381	Dasypus_novemcinctus
ENSEBUG00000014080	yrdc	81	41.414	ENSDNOG00000036198	-	96	41.414	Dasypus_novemcinctus
ENSEBUG00000014080	yrdc	79	56.477	ENSDORG00000008788	Yrdc	85	56.477	Dipodomys_ordii
ENSEBUG00000014080	yrdc	97	40.741	FBgn0061361	CG33786	98	40.741	Drosophila_melanogaster
ENSEBUG00000014080	yrdc	94	43.612	ENSETEG00000003442	YRDC	81	43.612	Echinops_telfairi
ENSEBUG00000014080	yrdc	95	51.739	ENSEASG00005012253	YRDC	82	51.739	Equus_asinus_asinus
ENSEBUG00000014080	yrdc	95	51.739	ENSECAG00000022522	YRDC	82	51.739	Equus_caballus
ENSEBUG00000014080	yrdc	92	51.376	ENSELUG00000018071	yrdc	72	51.376	Esox_lucius
ENSEBUG00000014080	yrdc	95	52.609	ENSFCAG00000011018	YRDC	82	52.609	Felis_catus
ENSEBUG00000014080	yrdc	79	56.250	ENSFALG00000000964	YRDC	89	56.410	Ficedula_albicollis
ENSEBUG00000014080	yrdc	97	48.936	ENSFHEG00000001029	yrdc	86	49.309	Fundulus_heteroclitus
ENSEBUG00000014080	yrdc	89	54.717	ENSGMOG00000015635	yrdc	100	54.717	Gadus_morhua
ENSEBUG00000014080	yrdc	87	53.774	ENSGALG00000029001	YRDC	82	53.774	Gallus_gallus
ENSEBUG00000014080	yrdc	99	47.234	ENSGAFG00000008396	yrdc	88	47.234	Gambusia_affinis
ENSEBUG00000014080	yrdc	98	48.305	ENSGACG00000013878	yrdc	98	48.305	Gasterosteus_aculeatus
ENSEBUG00000014080	yrdc	84	53.659	ENSGAGG00000014968	YRDC	89	53.659	Gopherus_agassizii
ENSEBUG00000014080	yrdc	95	51.739	ENSGGOG00000007619	YRDC	82	51.739	Gorilla_gorilla
ENSEBUG00000014080	yrdc	99	50.424	ENSHBUG00000009298	yrdc	87	50.424	Haplochromis_burtoni
ENSEBUG00000014080	yrdc	95	53.478	ENSHGLG00000014075	YRDC	82	53.478	Heterocephalus_glaber_female
ENSEBUG00000014080	yrdc	82	57.789	ENSHGLG00100002734	YRDC	72	57.789	Heterocephalus_glaber_male
ENSEBUG00000014080	yrdc	99	49.789	ENSHCOG00000006598	yrdc	93	49.789	Hippocampus_comes
ENSEBUG00000014080	yrdc	94	51.786	ENSIPUG00000014985	yrdc	92	51.786	Ictalurus_punctatus
ENSEBUG00000014080	yrdc	95	51.739	ENSSTOG00000001643	YRDC	82	51.739	Ictidomys_tridecemlineatus
ENSEBUG00000014080	yrdc	99	48.729	ENSKMAG00000013468	yrdc	88	48.729	Kryptolebias_marmoratus
ENSEBUG00000014080	yrdc	99	51.271	ENSLBEG00000027501	yrdc	88	51.271	Labrus_bergylta
ENSEBUG00000014080	yrdc	92	49.351	ENSLACG00000010689	YRDC	96	52.632	Latimeria_chalumnae
ENSEBUG00000014080	yrdc	75	31.937	ENSLACG00000017624	si:ch211-153b23.3	58	31.937	Latimeria_chalumnae
ENSEBUG00000014080	yrdc	91	50.455	ENSLOCG00000003321	yrdc	91	50.455	Lepisosteus_oculatus
ENSEBUG00000014080	yrdc	94	52.423	ENSLAFG00000017556	YRDC	81	52.423	Loxodonta_africana
ENSEBUG00000014080	yrdc	82	55.276	ENSMFAG00000003487	YRDC	94	55.779	Macaca_fascicularis
ENSEBUG00000014080	yrdc	95	51.304	ENSMMUG00000005372	YRDC	61	51.739	Macaca_mulatta
ENSEBUG00000014080	yrdc	95	51.304	ENSMNEG00000029348	YRDC	82	51.739	Macaca_nemestrina
ENSEBUG00000014080	yrdc	60	55.102	ENSMLEG00000041122	YRDC	97	55.782	Mandrillus_leucophaeus
ENSEBUG00000014080	yrdc	98	49.583	ENSMAMG00000007315	yrdc	87	49.583	Mastacembelus_armatus
ENSEBUG00000014080	yrdc	99	50.000	ENSMZEG00005006948	yrdc	87	50.000	Maylandia_zebra
ENSEBUG00000014080	yrdc	81	55.051	ENSMGAG00000002833	YRDC	97	55.051	Meleagris_gallopavo
ENSEBUG00000014080	yrdc	74	30.366	ENSMGAG00000005489	-	50	30.366	Meleagris_gallopavo
ENSEBUG00000014080	yrdc	95	52.609	ENSMICG00000031688	YRDC	83	52.609	Microcebus_murinus
ENSEBUG00000014080	yrdc	80	46.073	ENSMOCG00000000164	-	70	46.073	Microtus_ochrogaster
ENSEBUG00000014080	yrdc	99	48.729	ENSMMOG00000002119	yrdc	88	48.729	Mola_mola
ENSEBUG00000014080	yrdc	89	50.698	ENSMODG00000017750	YRDC	75	50.698	Monodelphis_domestica
ENSEBUG00000014080	yrdc	98	50.000	ENSMALG00000012471	yrdc	88	50.000	Monopterus_albus
ENSEBUG00000014080	yrdc	78	55.556	MGP_CAROLIEiJ_G0026453	Yrdc	97	56.863	Mus_caroli
ENSEBUG00000014080	yrdc	94	51.542	ENSMUSG00000028889	Yrdc	99	58.654	Mus_musculus
ENSEBUG00000014080	yrdc	94	51.101	MGP_PahariEiJ_G0028784	Yrdc	99	58.654	Mus_pahari
ENSEBUG00000014080	yrdc	85	54.854	MGP_SPRETEiJ_G0027432	Yrdc	74	54.854	Mus_spretus
ENSEBUG00000014080	yrdc	88	55.399	ENSMPUG00000014542	YRDC	85	55.399	Mustela_putorius_furo
ENSEBUG00000014080	yrdc	89	44.889	ENSMLUG00000028796	-	80	44.889	Myotis_lucifugus
ENSEBUG00000014080	yrdc	81	54.545	ENSMLUG00000024310	-	97	54.545	Myotis_lucifugus
ENSEBUG00000014080	yrdc	94	54.626	ENSMLUG00000000955	-	81	54.626	Myotis_lucifugus
ENSEBUG00000014080	yrdc	82	55.276	ENSNGAG00000019099	Yrdc	71	55.276	Nannospalax_galili
ENSEBUG00000014080	yrdc	99	50.211	ENSNBRG00000009475	yrdc	88	50.211	Neolamprologus_brichardi
ENSEBUG00000014080	yrdc	95	51.739	ENSNLEG00000011665	YRDC	83	51.739	Nomascus_leucogenys
ENSEBUG00000014080	yrdc	84	53.202	ENSMEUG00000005068	YRDC	94	53.202	Notamacropus_eugenii
ENSEBUG00000014080	yrdc	95	50.435	ENSODEG00000007401	YRDC	99	56.731	Octodon_degus
ENSEBUG00000014080	yrdc	98	50.638	ENSONIG00000016213	yrdc	98	50.638	Oreochromis_niloticus
ENSEBUG00000014080	yrdc	95	52.609	ENSOCUG00000005384	YRDC	78	52.609	Oryctolagus_cuniculus
ENSEBUG00000014080	yrdc	99	46.414	ENSORLG00000014393	yrdc	89	46.414	Oryzias_latipes
ENSEBUG00000014080	yrdc	99	46.809	ENSORLG00020019663	yrdc	89	46.809	Oryzias_latipes_hni
ENSEBUG00000014080	yrdc	99	46.414	ENSORLG00015004625	yrdc	90	46.414	Oryzias_latipes_hsok
ENSEBUG00000014080	yrdc	99	46.809	ENSOMEG00000018550	yrdc	89	46.809	Oryzias_melastigma
ENSEBUG00000014080	yrdc	95	52.609	ENSOGAG00000030474	YRDC	84	52.609	Otolemur_garnettii
ENSEBUG00000014080	yrdc	95	52.174	ENSOARG00000019873	YRDC	82	52.174	Ovis_aries
ENSEBUG00000014080	yrdc	59	55.172	ENSPPAG00000039722	-	97	55.172	Pan_paniscus
ENSEBUG00000014080	yrdc	95	52.609	ENSPPRG00000007752	YRDC	82	52.609	Panthera_pardus
ENSEBUG00000014080	yrdc	59	56.849	ENSPTIG00000019821	YRDC	63	56.849	Panthera_tigris_altaica
ENSEBUG00000014080	yrdc	95	51.739	ENSPTRG00000000557	YRDC	82	51.739	Pan_troglodytes
ENSEBUG00000014080	yrdc	95	51.304	ENSPANG00000006487	YRDC	62	51.739	Papio_anubis
ENSEBUG00000014080	yrdc	98	50.424	ENSPKIG00000004574	yrdc	86	50.424	Paramormyrops_kingsleyae
ENSEBUG00000014080	yrdc	85	53.883	ENSPSIG00000006483	YRDC	73	53.883	Pelodiscus_sinensis
ENSEBUG00000014080	yrdc	99	51.695	ENSPMGG00000004184	yrdc	92	51.695	Periophthalmus_magnuspinnatus
ENSEBUG00000014080	yrdc	71	54.913	ENSPEMG00000016985	Yrdc	76	54.913	Peromyscus_maniculatus_bairdii
ENSEBUG00000014080	yrdc	72	54.237	ENSPMAG00000002905	yrdc	96	54.237	Petromyzon_marinus
ENSEBUG00000014080	yrdc	84	52.941	ENSPCIG00000025731	YRDC	73	53.202	Phascolarctos_cinereus
ENSEBUG00000014080	yrdc	95	49.778	ENSPFOG00000023097	yrdc	84	49.778	Poecilia_formosa
ENSEBUG00000014080	yrdc	95	49.333	ENSPLAG00000020882	yrdc	84	49.333	Poecilia_latipinna
ENSEBUG00000014080	yrdc	95	49.778	ENSPMEG00000013237	yrdc	85	49.778	Poecilia_mexicana
ENSEBUG00000014080	yrdc	99	48.085	ENSPREG00000005285	yrdc	88	48.085	Poecilia_reticulata
ENSEBUG00000014080	yrdc	86	54.545	ENSPPYG00000001523	-	86	54.545	Pongo_abelii
ENSEBUG00000014080	yrdc	94	51.101	ENSPCAG00000016850	YRDC	81	51.101	Procavia_capensis
ENSEBUG00000014080	yrdc	95	52.609	ENSPCOG00000013214	YRDC	82	52.609	Propithecus_coquereli
ENSEBUG00000014080	yrdc	95	51.739	ENSPVAG00000010147	YRDC	82	51.739	Pteropus_vampyrus
ENSEBUG00000014080	yrdc	99	50.424	ENSPNYG00000013956	yrdc	87	50.424	Pundamilia_nyererei
ENSEBUG00000014080	yrdc	89	50.000	ENSPNAG00000015625	yrdc	87	50.000	Pygocentrus_nattereri
ENSEBUG00000014080	yrdc	85	54.854	ENSRNOG00000025424	Yrdc	75	54.067	Rattus_norvegicus
ENSEBUG00000014080	yrdc	95	51.739	ENSRBIG00000032289	YRDC	82	51.739	Rhinopithecus_bieti
ENSEBUG00000014080	yrdc	82	55.276	ENSRROG00000039370	YRDC	68	55.779	Rhinopithecus_roxellana
ENSEBUG00000014080	yrdc	88	30.736	YGL169W	-	54	30.736	Saccharomyces_cerevisiae
ENSEBUG00000014080	yrdc	84	55.665	ENSSBOG00000018937	YRDC	87	55.122	Saimiri_boliviensis_boliviensis
ENSEBUG00000014080	yrdc	58	55.245	ENSSHAG00000013957	-	97	55.245	Sarcophilus_harrisii
ENSEBUG00000014080	yrdc	88	51.643	ENSSFOG00015006128	yrdc	91	51.643	Scleropages_formosus
ENSEBUG00000014080	yrdc	99	48.548	ENSSMAG00000005195	yrdc	89	48.548	Scophthalmus_maximus
ENSEBUG00000014080	yrdc	99	49.793	ENSSDUG00000009775	yrdc	88	49.793	Seriola_dumerili
ENSEBUG00000014080	yrdc	53	33.088	ENSSDUG00000006631	-	63	31.538	Seriola_dumerili
ENSEBUG00000014080	yrdc	67	30.120	ENSSDUG00000006736	-	78	33.553	Seriola_dumerili
ENSEBUG00000014080	yrdc	99	49.793	ENSSLDG00000003196	yrdc	88	49.793	Seriola_lalandi_dorsalis
ENSEBUG00000014080	yrdc	53	31.538	ENSSLDG00000008694	-	62	31.538	Seriola_lalandi_dorsalis
ENSEBUG00000014080	yrdc	82	54.774	ENSSPUG00000003946	YRDC	77	54.774	Sphenodon_punctatus
ENSEBUG00000014080	yrdc	99	49.576	ENSSPAG00000012559	yrdc	89	49.576	Stegastes_partitus
ENSEBUG00000014080	yrdc	95	52.609	ENSSSCG00000040425	YRDC	82	52.609	Sus_scrofa
ENSEBUG00000014080	yrdc	59	55.862	ENSTGUG00000001507	YRDC	99	55.862	Taeniopygia_guttata
ENSEBUG00000014080	yrdc	99	47.917	ENSTRUG00000005923	yrdc	89	49.167	Takifugu_rubripes
ENSEBUG00000014080	yrdc	63	56.494	ENSTBEG00000008863	YRDC	98	56.494	Tupaia_belangeri
ENSEBUG00000014080	yrdc	58	57.042	ENSTTRG00000013538	-	95	57.042	Tursiops_truncatus
ENSEBUG00000014080	yrdc	82	56.281	ENSUAMG00000006150	YRDC	98	56.281	Ursus_americanus
ENSEBUG00000014080	yrdc	94	42.731	ENSVPAG00000006642	YRDC	97	42.731	Vicugna_pacos
ENSEBUG00000014080	yrdc	64	56.051	ENSVVUG00000023132	-	52	56.051	Vulpes_vulpes
ENSEBUG00000014080	yrdc	97	48.305	ENSXETG00000014420	yrdc	93	48.305	Xenopus_tropicalis
ENSEBUG00000014080	yrdc	95	48.889	ENSXCOG00000000829	yrdc	94	48.889	Xiphophorus_couchianus
ENSEBUG00000014080	yrdc	99	47.234	ENSXMAG00000014606	yrdc	83	47.234	Xiphophorus_maculatus