EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000014235 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 81250 bases
Position: chrFYBX02009580.1:28876-110125
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000023117	RtcB	PF01139.17	2.6e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000023693	-	1452	-	ENSEBUP00000023117	483 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014235	rtcb	100	85.743	ENSG00000100220	RTCB	100	85.743	Homo_sapiens
ENSEBUG00000014235	rtcb	100	86.139	ENSAPOG00000006040	rtcb	100	86.139	Acanthochromis_polyacanthus
ENSEBUG00000014235	rtcb	100	85.743	ENSAMEG00000016152	RTCB	100	85.743	Ailuropoda_melanoleuca
ENSEBUG00000014235	rtcb	100	80.792	ENSACIG00000009083	rtcb	100	80.792	Amphilophus_citrinellus
ENSEBUG00000014235	rtcb	100	86.337	ENSAOCG00000005662	rtcb	100	86.957	Amphiprion_ocellaris
ENSEBUG00000014235	rtcb	100	86.337	ENSAPEG00000024701	rtcb	100	86.337	Amphiprion_percula
ENSEBUG00000014235	rtcb	96	81.930	ENSAPEG00000024653	rtcb	100	81.930	Amphiprion_percula
ENSEBUG00000014235	rtcb	100	85.545	ENSATEG00000000618	rtcb	100	85.545	Anabas_testudineus
ENSEBUG00000014235	rtcb	100	82.852	ENSACAG00000014817	RTCB	100	82.852	Anolis_carolinensis
ENSEBUG00000014235	rtcb	100	61.649	ENSANAG00000023724	-	100	61.649	Aotus_nancymaae
ENSEBUG00000014235	rtcb	100	76.907	ENSANAG00000018191	-	91	76.907	Aotus_nancymaae
ENSEBUG00000014235	rtcb	100	85.743	ENSACLG00000008367	rtcb	100	86.739	Astatotilapia_calliptera
ENSEBUG00000014235	rtcb	100	86.535	ENSAMXG00000042320	rtcb	100	86.535	Astyanax_mexicanus
ENSEBUG00000014235	rtcb	100	85.743	ENSBTAG00000011070	RTCB	100	85.743	Bos_taurus
ENSEBUG00000014235	rtcb	100	70.495	WBGene00008877	rtcb-1	100	70.495	Caenorhabditis_elegans
ENSEBUG00000014235	rtcb	100	85.545	ENSCJAG00000006128	RTCB	100	85.545	Callithrix_jacchus
ENSEBUG00000014235	rtcb	100	85.743	ENSCAFG00000001785	RTCB	100	85.743	Canis_familiaris
ENSEBUG00000014235	rtcb	100	81.584	ENSCAFG00000010789	-	100	81.584	Canis_familiaris
ENSEBUG00000014235	rtcb	100	85.743	ENSCAFG00020004890	-	100	85.743	Canis_lupus_dingo
ENSEBUG00000014235	rtcb	87	81.591	ENSCAFG00020018953	-	99	81.591	Canis_lupus_dingo
ENSEBUG00000014235	rtcb	100	85.743	ENSCHIG00000027009	-	100	85.743	Capra_hircus
ENSEBUG00000014235	rtcb	100	85.545	ENSTSYG00000012320	RTCB	100	85.545	Carlito_syrichta
ENSEBUG00000014235	rtcb	99	82.341	ENSCAPG00000011647	RTCB	99	82.341	Cavia_aperea
ENSEBUG00000014235	rtcb	100	85.545	ENSCCAG00000000618	RTCB	100	85.545	Cebus_capucinus
ENSEBUG00000014235	rtcb	100	85.545	ENSCATG00000033424	RTCB	100	85.545	Cercocebus_atys
ENSEBUG00000014235	rtcb	100	85.941	ENSCLAG00000007997	RTCB	100	85.941	Chinchilla_lanigera
ENSEBUG00000014235	rtcb	100	85.347	ENSCSAG00000008351	RTCB	100	85.347	Chlorocebus_sabaeus
ENSEBUG00000014235	rtcb	100	72.277	ENSCHOG00000009123	RTCB	100	72.277	Choloepus_hoffmanni
ENSEBUG00000014235	rtcb	100	85.149	ENSCPBG00000023184	RTCB	100	85.149	Chrysemys_picta_bellii
ENSEBUG00000014235	rtcb	100	76.634	ENSCING00000003830	-	100	76.634	Ciona_intestinalis
ENSEBUG00000014235	rtcb	100	77.624	ENSCSAVG00000008124	-	99	77.624	Ciona_savignyi
ENSEBUG00000014235	rtcb	100	81.980	ENSCANG00000001891	RTCB	100	81.980	Colobus_angolensis_palliatus
ENSEBUG00000014235	rtcb	100	85.347	ENSCGRG00001011173	Rtcb	100	85.347	Cricetulus_griseus_chok1gshd
ENSEBUG00000014235	rtcb	93	86.170	ENSCGRG00000009587	-	96	86.170	Cricetulus_griseus_crigri
ENSEBUG00000014235	rtcb	100	85.941	ENSCSEG00000003986	rtcb	100	85.941	Cynoglossus_semilaevis
ENSEBUG00000014235	rtcb	82	83.654	ENSCVAG00000000569	rtcb	95	83.654	Cyprinodon_variegatus
ENSEBUG00000014235	rtcb	100	85.941	ENSDARG00000101047	rtcb	100	85.941	Danio_rerio
ENSEBUG00000014235	rtcb	77	88.441	ENSDNOG00000012425	RTCB	91	88.441	Dasypus_novemcinctus
ENSEBUG00000014235	rtcb	100	85.347	ENSDORG00000010855	Rtcb	100	85.347	Dipodomys_ordii
ENSEBUG00000014235	rtcb	99	77.336	FBgn0032781	RtcB	99	77.336	Drosophila_melanogaster
ENSEBUG00000014235	rtcb	100	84.554	ENSETEG00000001988	RTCB	100	84.554	Echinops_telfairi
ENSEBUG00000014235	rtcb	100	85.545	ENSEASG00005019059	RTCB	100	85.545	Equus_asinus_asinus
ENSEBUG00000014235	rtcb	100	85.545	ENSECAG00000023998	RTCB	100	85.545	Equus_caballus
ENSEBUG00000014235	rtcb	88	77.130	ENSEEUG00000006251	RTCB	99	77.130	Erinaceus_europaeus
ENSEBUG00000014235	rtcb	100	80.431	ENSELUG00000009275	rtcb	100	80.431	Esox_lucius
ENSEBUG00000014235	rtcb	100	85.743	ENSFCAG00000026480	RTCB	100	85.743	Felis_catus
ENSEBUG00000014235	rtcb	100	85.743	ENSFALG00000013334	RTCB	100	85.743	Ficedula_albicollis
ENSEBUG00000014235	rtcb	100	85.545	ENSFDAG00000018150	RTCB	100	85.545	Fukomys_damarensis
ENSEBUG00000014235	rtcb	100	85.545	ENSFHEG00000009595	rtcb	100	85.545	Fundulus_heteroclitus
ENSEBUG00000014235	rtcb	100	84.554	ENSGMOG00000018882	rtcb	100	84.554	Gadus_morhua
ENSEBUG00000014235	rtcb	100	85.347	ENSGALG00000012611	RTCB	100	85.347	Gallus_gallus
ENSEBUG00000014235	rtcb	100	85.743	ENSGAFG00000004198	rtcb	100	85.743	Gambusia_affinis
ENSEBUG00000014235	rtcb	100	85.347	ENSGACG00000000586	rtcb	100	85.347	Gasterosteus_aculeatus
ENSEBUG00000014235	rtcb	93	83.830	ENSGAGG00000019133	RTCB	98	83.830	Gopherus_agassizii
ENSEBUG00000014235	rtcb	100	85.743	ENSGGOG00000011402	RTCB	100	85.743	Gorilla_gorilla
ENSEBUG00000014235	rtcb	100	85.743	ENSHBUG00000020571	rtcb	100	85.743	Haplochromis_burtoni
ENSEBUG00000014235	rtcb	100	85.545	ENSHGLG00000004492	RTCB	100	85.545	Heterocephalus_glaber_female
ENSEBUG00000014235	rtcb	93	63.938	ENSHGLG00000001066	-	99	63.938	Heterocephalus_glaber_female
ENSEBUG00000014235	rtcb	100	85.545	ENSHGLG00100008965	RTCB	100	85.545	Heterocephalus_glaber_male
ENSEBUG00000014235	rtcb	100	84.024	ENSHCOG00000006450	rtcb	100	84.024	Hippocampus_comes
ENSEBUG00000014235	rtcb	100	86.139	ENSIPUG00000015443	rtcb	100	86.139	Ictalurus_punctatus
ENSEBUG00000014235	rtcb	100	85.545	ENSSTOG00000003878	RTCB	100	85.545	Ictidomys_tridecemlineatus
ENSEBUG00000014235	rtcb	100	85.347	ENSJJAG00000010667	Rtcb	100	85.347	Jaculus_jaculus
ENSEBUG00000014235	rtcb	100	86.139	ENSKMAG00000013178	rtcb	100	86.139	Kryptolebias_marmoratus
ENSEBUG00000014235	rtcb	100	84.950	ENSLBEG00000000214	rtcb	100	84.950	Labrus_bergylta
ENSEBUG00000014235	rtcb	100	85.941	ENSLBEG00000010566	RTCB	100	85.941	Labrus_bergylta
ENSEBUG00000014235	rtcb	100	86.535	ENSLACG00000013033	RTCB	100	86.535	Latimeria_chalumnae
ENSEBUG00000014235	rtcb	100	85.545	ENSLOCG00000016515	rtcb	99	85.545	Lepisosteus_oculatus
ENSEBUG00000014235	rtcb	100	85.149	ENSLAFG00000002082	RTCB	100	85.149	Loxodonta_africana
ENSEBUG00000014235	rtcb	100	85.347	ENSMFAG00000034419	RTCB	100	85.347	Macaca_fascicularis
ENSEBUG00000014235	rtcb	100	85.347	ENSMMUG00000006720	RTCB	100	85.347	Macaca_mulatta
ENSEBUG00000014235	rtcb	100	85.347	ENSMNEG00000040669	RTCB	100	85.347	Macaca_nemestrina
ENSEBUG00000014235	rtcb	100	85.545	ENSMLEG00000040505	RTCB	100	85.545	Mandrillus_leucophaeus
ENSEBUG00000014235	rtcb	100	85.743	ENSMAMG00000020676	rtcb	100	85.743	Mastacembelus_armatus
ENSEBUG00000014235	rtcb	100	85.743	ENSMZEG00005018942	rtcb	100	85.743	Maylandia_zebra
ENSEBUG00000014235	rtcb	100	85.010	ENSMGAG00000012805	RTCB	100	85.010	Meleagris_gallopavo
ENSEBUG00000014235	rtcb	62	92.857	ENSMAUG00000008301	Rtcb	100	92.857	Mesocricetus_auratus
ENSEBUG00000014235	rtcb	100	68.663	ENSMICG00000036677	-	100	68.663	Microcebus_murinus
ENSEBUG00000014235	rtcb	100	85.545	ENSMICG00000013303	-	100	85.545	Microcebus_murinus
ENSEBUG00000014235	rtcb	100	85.545	ENSMOCG00000002440	Rtcb	100	85.545	Microtus_ochrogaster
ENSEBUG00000014235	rtcb	100	85.743	ENSMMOG00000005987	rtcb	100	85.743	Mola_mola
ENSEBUG00000014235	rtcb	100	85.149	ENSMODG00000001414	RTCB	100	85.149	Monodelphis_domestica
ENSEBUG00000014235	rtcb	100	85.347	ENSMALG00000007603	rtcb	100	85.347	Monopterus_albus
ENSEBUG00000014235	rtcb	100	85.347	MGP_CAROLIEiJ_G0015689	Rtcb	100	85.347	Mus_caroli
ENSEBUG00000014235	rtcb	100	85.347	ENSMUSG00000001783	Rtcb	100	85.347	Mus_musculus
ENSEBUG00000014235	rtcb	100	85.347	MGP_PahariEiJ_G0031396	Rtcb	100	85.347	Mus_pahari
ENSEBUG00000014235	rtcb	100	85.347	MGP_SPRETEiJ_G0016507	Rtcb	100	85.347	Mus_spretus
ENSEBUG00000014235	rtcb	100	85.743	ENSMPUG00000012285	RTCB	100	85.743	Mustela_putorius_furo
ENSEBUG00000014235	rtcb	100	83.037	ENSMLUG00000007803	RTCB	100	83.037	Myotis_lucifugus
ENSEBUG00000014235	rtcb	81	84.483	ENSNGAG00000005093	Rtcb	100	84.483	Nannospalax_galili
ENSEBUG00000014235	rtcb	100	85.941	ENSNBRG00000017202	rtcb	100	85.941	Neolamprologus_brichardi
ENSEBUG00000014235	rtcb	100	85.743	ENSNLEG00000004960	RTCB	100	85.743	Nomascus_leucogenys
ENSEBUG00000014235	rtcb	92	92.857	ENSMEUG00000007809	-	88	92.857	Notamacropus_eugenii
ENSEBUG00000014235	rtcb	76	90.000	ENSOPRG00000003488	RTCB	79	90.000	Ochotona_princeps
ENSEBUG00000014235	rtcb	100	57.624	ENSODEG00000005042	-	100	57.624	Octodon_degus
ENSEBUG00000014235	rtcb	82	90.037	ENSODEG00000013033	-	100	90.037	Octodon_degus
ENSEBUG00000014235	rtcb	100	85.941	ENSONIG00000007474	rtcb	100	85.941	Oreochromis_niloticus
ENSEBUG00000014235	rtcb	100	85.545	ENSOANG00000005524	RTCB	100	85.545	Ornithorhynchus_anatinus
ENSEBUG00000014235	rtcb	93	85.106	ENSOCUG00000008270	RTCB	96	85.106	Oryctolagus_cuniculus
ENSEBUG00000014235	rtcb	100	86.139	ENSORLG00000020093	rtcb	100	86.139	Oryzias_latipes
ENSEBUG00000014235	rtcb	100	86.535	ENSORLG00020003706	rtcb	100	86.535	Oryzias_latipes_hni
ENSEBUG00000014235	rtcb	100	86.337	ENSORLG00015002968	rtcb	100	86.337	Oryzias_latipes_hsok
ENSEBUG00000014235	rtcb	100	86.337	ENSOMEG00000021278	rtcb	100	86.337	Oryzias_melastigma
ENSEBUG00000014235	rtcb	100	85.347	ENSOGAG00000001425	RTCB	100	85.347	Otolemur_garnettii
ENSEBUG00000014235	rtcb	100	85.743	ENSOARG00000018008	RTCB	100	85.743	Ovis_aries
ENSEBUG00000014235	rtcb	100	85.743	ENSPPAG00000028667	RTCB	100	85.743	Pan_paniscus
ENSEBUG00000014235	rtcb	100	85.743	ENSPPRG00000004038	RTCB	100	85.743	Panthera_pardus
ENSEBUG00000014235	rtcb	94	81.474	ENSPTIG00000020499	RTCB	97	82.526	Panthera_tigris_altaica
ENSEBUG00000014235	rtcb	100	85.743	ENSPTRG00000014287	RTCB	100	85.743	Pan_troglodytes
ENSEBUG00000014235	rtcb	100	85.347	ENSPANG00000016035	RTCB	100	85.347	Papio_anubis
ENSEBUG00000014235	rtcb	100	85.941	ENSPKIG00000001881	rtcb	100	85.941	Paramormyrops_kingsleyae
ENSEBUG00000014235	rtcb	91	85.652	ENSPSIG00000011690	RTCB	100	85.652	Pelodiscus_sinensis
ENSEBUG00000014235	rtcb	100	85.743	ENSPMGG00000016672	rtcb	100	85.743	Periophthalmus_magnuspinnatus
ENSEBUG00000014235	rtcb	100	85.347	ENSPEMG00000019548	Rtcb	100	85.347	Peromyscus_maniculatus_bairdii
ENSEBUG00000014235	rtcb	100	87.129	ENSPMAG00000005657	rtcb	100	87.129	Petromyzon_marinus
ENSEBUG00000014235	rtcb	100	85.545	ENSPCIG00000009467	RTCB	100	85.545	Phascolarctos_cinereus
ENSEBUG00000014235	rtcb	100	86.139	ENSPFOG00000003058	rtcb	100	86.139	Poecilia_formosa
ENSEBUG00000014235	rtcb	100	86.337	ENSPLAG00000017663	rtcb	100	86.337	Poecilia_latipinna
ENSEBUG00000014235	rtcb	100	86.139	ENSPMEG00000006227	rtcb	100	86.139	Poecilia_mexicana
ENSEBUG00000014235	rtcb	100	86.139	ENSPREG00000018467	rtcb	100	86.139	Poecilia_reticulata
ENSEBUG00000014235	rtcb	100	85.743	ENSPPYG00000011752	RTCB	100	85.743	Pongo_abelii
ENSEBUG00000014235	rtcb	93	68.008	ENSPCAG00000013641	RTCB	100	68.008	Procavia_capensis
ENSEBUG00000014235	rtcb	100	85.545	ENSPCOG00000017243	RTCB	100	85.545	Propithecus_coquereli
ENSEBUG00000014235	rtcb	93	84.255	ENSPVAG00000002380	RTCB	100	84.255	Pteropus_vampyrus
ENSEBUG00000014235	rtcb	100	85.743	ENSPNYG00000022760	rtcb	100	85.743	Pundamilia_nyererei
ENSEBUG00000014235	rtcb	100	86.337	ENSPNAG00000009209	rtcb	100	86.337	Pygocentrus_nattereri
ENSEBUG00000014235	rtcb	100	85.347	ENSRNOG00000004813	Rtcb	100	85.347	Rattus_norvegicus
ENSEBUG00000014235	rtcb	100	77.909	ENSRBIG00000042090	RTCB	100	77.909	Rhinopithecus_bieti
ENSEBUG00000014235	rtcb	100	81.386	ENSSBOG00000020085	-	100	81.386	Saimiri_boliviensis_boliviensis
ENSEBUG00000014235	rtcb	94	86.076	ENSSHAG00000016277	RTCB	100	86.076	Sarcophilus_harrisii
ENSEBUG00000014235	rtcb	100	85.149	ENSSFOG00015011572	RTCB	100	85.149	Scleropages_formosus
ENSEBUG00000014235	rtcb	100	85.743	ENSSFOG00015000763	rtcb	100	85.743	Scleropages_formosus
ENSEBUG00000014235	rtcb	100	84.356	ENSSMAG00000005096	rtcb	100	84.356	Scophthalmus_maximus
ENSEBUG00000014235	rtcb	100	85.149	ENSSDUG00000012605	rtcb	100	85.149	Seriola_dumerili
ENSEBUG00000014235	rtcb	100	85.149	ENSSLDG00000019458	rtcb	100	85.149	Seriola_lalandi_dorsalis
ENSEBUG00000014235	rtcb	69	94.286	ENSSARG00000004799	-	70	94.286	Sorex_araneus
ENSEBUG00000014235	rtcb	100	85.149	ENSSPUG00000012814	RTCB	100	85.149	Sphenodon_punctatus
ENSEBUG00000014235	rtcb	100	86.337	ENSSPAG00000004623	rtcb	100	86.337	Stegastes_partitus
ENSEBUG00000014235	rtcb	100	85.743	ENSSSCG00000000158	RTCB	100	85.743	Sus_scrofa
ENSEBUG00000014235	rtcb	100	85.743	ENSTGUG00000010947	RTCB	99	85.743	Taeniopygia_guttata
ENSEBUG00000014235	rtcb	91	86.522	ENSTRUG00000009880	rtcb	100	87.952	Takifugu_rubripes
ENSEBUG00000014235	rtcb	100	85.347	ENSTNIG00000002484	rtcb	100	85.347	Tetraodon_nigroviridis
ENSEBUG00000014235	rtcb	100	73.069	ENSTBEG00000004418	RTCB	100	73.069	Tupaia_belangeri
ENSEBUG00000014235	rtcb	93	84.681	ENSTTRG00000006417	RTCB	100	84.681	Tursiops_truncatus
ENSEBUG00000014235	rtcb	100	85.743	ENSUAMG00000022792	RTCB	100	85.743	Ursus_americanus
ENSEBUG00000014235	rtcb	100	85.743	ENSUMAG00000017225	RTCB	100	85.743	Ursus_maritimus
ENSEBUG00000014235	rtcb	100	85.545	ENSVPAG00000005375	RTCB	100	85.545	Vicugna_pacos
ENSEBUG00000014235	rtcb	100	85.743	ENSVVUG00000023408	RTCB	100	85.743	Vulpes_vulpes
ENSEBUG00000014235	rtcb	100	84.356	ENSXETG00000011523	rtcb	100	84.356	Xenopus_tropicalis
ENSEBUG00000014235	rtcb	100	85.743	ENSXMAG00000002855	rtcb	100	85.743	Xiphophorus_maculatus