EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000014291 (Gene tree)
Gene ID
-
Gene Symbol
puf60b
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Minus strand
Length
156775 bases
Position
chrFYBX02009908.1:13496875-13653649
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000023202RRM_1PF00076.221.7e-4112
ENSEBUP00000023202RRM_1PF00076.221.7e-4122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000023778-4184-ENSEBUP00000023202674 (aa)--
Gene Model
Click here to download ENSEBUG00000014291's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014291's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000014291puf60b8163.603ENSEBUG00000005470-8861.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000014291puf60b8565.739ENSG00000179950PUF6010063.176Homo_sapiens
ENSEBUG00000014291puf60b8463.811ENSAPOG00000001713puf60b9761.739Acanthochromis_polyacanthus
ENSEBUG00000014291puf60b8561.993ENSAMEG00000006406PUF609460.336Ailuropoda_melanoleuca
ENSEBUG00000014291puf60b8459.864ENSACIG00000003263-9957.483Amphilophus_citrinellus
ENSEBUG00000014291puf60b8461.630ENSACIG00000021705puf60b10059.291Amphilophus_citrinellus
ENSEBUG00000014291puf60b8264.187ENSAOCG00000015558-9760.900Amphiprion_ocellaris
ENSEBUG00000014291puf60b8463.811ENSAOCG00000005395puf60b10059.628Amphiprion_ocellaris
ENSEBUG00000014291puf60b8461.888ENSAPEG00000011923puf60b9759.826Amphiprion_percula
ENSEBUG00000014291puf60b8260.000ENSAPEG00000001836-9957.570Amphiprion_percula
ENSEBUG00000014291puf60b8461.630ENSATEG00000001730puf60b9859.291Anabas_testudineus
ENSEBUG00000014291puf60b8462.116ENSATEG00000006303-9861.263Anabas_testudineus
ENSEBUG00000014291puf60b8464.177ENSAPLG00000010150PUF609961.046Anas_platyrhynchos
ENSEBUG00000014291puf60b8464.686ENSACAG00000001645PUF609761.616Anolis_carolinensis
ENSEBUG00000014291puf60b8465.909ENSANAG00000018626PUF6010061.017Aotus_nancymaae
ENSEBUG00000014291puf60b8463.462ENSACLG00000004462puf60b10061.391Astatotilapia_calliptera
ENSEBUG00000014291puf60b8662.649ENSAMXG00000036570puf60a9960.202Astyanax_mexicanus
ENSEBUG00000014291puf60b8158.772ENSAMXG00000041030puf60b9857.746Astyanax_mexicanus
ENSEBUG00000014291puf60b8565.739ENSBTAG00000037493PUF609960.672Bos_taurus
ENSEBUG00000014291puf60b6847.788WBGene00004389rnp-68747.756Caenorhabditis_elegans
ENSEBUG00000014291puf60b8565.739ENSCJAG00000021485PUF609860.672Callithrix_jacchus
ENSEBUG00000014291puf60b8565.739ENSCAFG00000001400PUF609362.651Canis_familiaris
ENSEBUG00000014291puf60b8565.739ENSCAFG00020018754PUF609860.672Canis_lupus_dingo
ENSEBUG00000014291puf60b8563.851ENSCHIG00000001618PUF608760.535Capra_hircus
ENSEBUG00000014291puf60b8564.786ENSTSYG00000011912PUF6010061.017Carlito_syrichta
ENSEBUG00000014291puf60b8561.658ENSCPOG00000014613PUF609458.632Cavia_porcellus
ENSEBUG00000014291puf60b8565.565ENSCCAG00000007744PUF609860.708Cebus_capucinus
ENSEBUG00000014291puf60b8565.739ENSCATG00000035405PUF609860.672Cercocebus_atys
ENSEBUG00000014291puf60b8565.739ENSCLAG00000009154PUF609362.651Chinchilla_lanigera
ENSEBUG00000014291puf60b8464.384ENSCSAG00000008878PUF6010061.017Chlorocebus_sabaeus
ENSEBUG00000014291puf60b8464.555ENSCPBG00000005595PUF609861.214Chrysemys_picta_bellii
ENSEBUG00000014291puf60b8447.875ENSCING00000008436-9943.866Ciona_intestinalis
ENSEBUG00000014291puf60b8148.174ENSCSAVG00000001385-9948.082Ciona_savignyi
ENSEBUG00000014291puf60b5959.843ENSCSAVG00000004765-9257.959Ciona_savignyi
ENSEBUG00000014291puf60b7064.076ENSCANG00000041843PUF6010058.452Colobus_angolensis_palliatus
ENSEBUG00000014291puf60b8466.314ENSCGRG00001017442Puf609163.398Cricetulus_griseus_chok1gshd
ENSEBUG00000014291puf60b8464.384ENSCGRG00000003717Puf609261.224Cricetulus_griseus_crigri
ENSEBUG00000014291puf60b8460.781ENSCSEG00000019887puf60b9159.122Cynoglossus_semilaevis
ENSEBUG00000014291puf60b8459.860ENSCSEG00000014845-8960.000Cynoglossus_semilaevis
ENSEBUG00000014291puf60b7563.619ENSCVAG00000001560-9262.451Cyprinodon_variegatus
ENSEBUG00000014291puf60b8462.587ENSCVAG00000009386puf60b10061.739Cyprinodon_variegatus
ENSEBUG00000014291puf60b8462.689ENSDARG00000032175puf60a9969.048Danio_rerio
ENSEBUG00000014291puf60b8460.377ENSDARG00000001241puf60b9976.208Danio_rerio
ENSEBUG00000014291puf60b7557.843ENSDNOG00000043278PUF607754.617Dasypus_novemcinctus
ENSEBUG00000014291puf60b8565.739ENSDORG00000004585Puf609562.651Dipodomys_ordii
ENSEBUG00000014291puf60b8565.739ENSEASG00005009695PUF609860.672Equus_asinus_asinus
ENSEBUG00000014291puf60b8565.739ENSECAG00000024681PUF609760.672Equus_caballus
ENSEBUG00000014291puf60b8460.445ENSELUG00000006507puf60b9859.052Esox_lucius
ENSEBUG00000014291puf60b8464.348ENSELUG00000018443-9962.435Esox_lucius
ENSEBUG00000014291puf60b8565.913ENSFCAG00000001045PUF6010061.186Felis_catus
ENSEBUG00000014291puf60b8457.555ENSFALG00000001136PUF609854.622Ficedula_albicollis
ENSEBUG00000014291puf60b8566.087ENSFDAG00000017177PUF609362.995Fukomys_damarensis
ENSEBUG00000014291puf60b7962.857ENSFHEG00000021687PUF6010059.927Fundulus_heteroclitus
ENSEBUG00000014291puf60b8462.413ENSFHEG00000020046puf60b10061.565Fundulus_heteroclitus
ENSEBUG00000014291puf60b8452.931ENSGMOG00000006392puf60b9949.228Gadus_morhua
ENSEBUG00000014291puf60b5862.255ENSGALG00000039901PUF609361.369Gallus_gallus
ENSEBUG00000014291puf60b8460.951ENSGAFG00000021040puf60b10059.459Gambusia_affinis
ENSEBUG00000014291puf60b8462.478ENSGAFG00000004334-9960.638Gambusia_affinis
ENSEBUG00000014291puf60b8356.604ENSGACG00000001484-9954.657Gasterosteus_aculeatus
ENSEBUG00000014291puf60b8452.632ENSGACG00000004717puf60b9750.000Gasterosteus_aculeatus
ENSEBUG00000014291puf60b8466.490ENSGAGG00000013289PUF609562.081Gopherus_agassizii
ENSEBUG00000014291puf60b8565.739ENSGGOG00000004646PUF609860.672Gorilla_gorilla
ENSEBUG00000014291puf60b8463.462ENSHBUG00000015118puf60b10061.391Haplochromis_burtoni
ENSEBUG00000014291puf60b8465.385ENSHBUG00000009634-10062.762Haplochromis_burtoni
ENSEBUG00000014291puf60b8566.087ENSHGLG00000006111PUF609362.995Heterocephalus_glaber_female
ENSEBUG00000014291puf60b8566.087ENSHGLG00100012362PUF609362.995Heterocephalus_glaber_male
ENSEBUG00000014291puf60b8462.565ENSHCOG00000015541puf60b9959.658Hippocampus_comes
ENSEBUG00000014291puf60b8153.534ENSHCOG00000000378-9951.795Hippocampus_comes
ENSEBUG00000014291puf60b8459.758ENSIPUG00000004660puf60b9957.414Ictalurus_punctatus
ENSEBUG00000014291puf60b8461.498ENSIPUG00000002453puf60a9957.763Ictalurus_punctatus
ENSEBUG00000014291puf60b8563.851ENSSTOG00000025037PUF609460.535Ictidomys_tridecemlineatus
ENSEBUG00000014291puf60b8565.739ENSJJAG00000001076Puf609362.651Jaculus_jaculus
ENSEBUG00000014291puf60b8461.800ENSKMAG00000016745puf60b10059.291Kryptolebias_marmoratus
ENSEBUG00000014291puf60b8461.760ENSKMAG00000010106-10058.913Kryptolebias_marmoratus
ENSEBUG00000014291puf60b8475.676ENSLBEG00000012505puf60b9975.676Labrus_bergylta
ENSEBUG00000014291puf60b6361.124ENSLACG00000005456PUF609957.042Latimeria_chalumnae
ENSEBUG00000014291puf60b8464.225ENSLOCG00000010106puf60b9860.847Lepisosteus_oculatus
ENSEBUG00000014291puf60b8563.345ENSLAFG00000022929PUF609461.785Loxodonta_africana
ENSEBUG00000014291puf60b8565.739ENSMFAG00000043373PUF609860.672Macaca_fascicularis
ENSEBUG00000014291puf60b8565.739ENSMMUG00000013558PUF609860.672Macaca_mulatta
ENSEBUG00000014291puf60b8565.739ENSMNEG00000031099PUF609860.672Macaca_nemestrina
ENSEBUG00000014291puf60b8466.314ENSMLEG00000040009PUF6010063.176Mandrillus_leucophaeus
ENSEBUG00000014291puf60b8462.351ENSMAMG00000019476-9861.329Mastacembelus_armatus
ENSEBUG00000014291puf60b8561.301ENSMAMG00000010394puf60b10059.191Mastacembelus_armatus
ENSEBUG00000014291puf60b8463.667ENSMZEG00005019425-9861.224Maylandia_zebra
ENSEBUG00000014291puf60b8463.462ENSMZEG00005018515puf60b10061.391Maylandia_zebra
ENSEBUG00000014291puf60b8564.129ENSMGAG00000013070PUF609861.008Meleagris_gallopavo
ENSEBUG00000014291puf60b7955.064ENSMAUG00000018549-9554.512Mesocricetus_auratus
ENSEBUG00000014291puf60b6165.693ENSMAUG00000014267-8861.446Mesocricetus_auratus
ENSEBUG00000014291puf60b8563.851ENSMICG00000012226PUF609960.672Microcebus_murinus
ENSEBUG00000014291puf60b8466.314ENSMOCG00000018780Puf609163.176Microtus_ochrogaster
ENSEBUG00000014291puf60b8460.611ENSMMOG00000004217puf60b10058.953Mola_mola
ENSEBUG00000014291puf60b8460.816ENSMMOG00000018059-9958.250Mola_mola
ENSEBUG00000014291puf60b8565.739ENSMODG00000009161PUF609562.651Monodelphis_domestica
ENSEBUG00000014291puf60b8455.857ENSMALG00000006797puf60b9755.348Monopterus_albus
ENSEBUG00000014291puf60b8461.224ENSMALG00000000200-9860.884Monopterus_albus
ENSEBUG00000014291puf60b8566.087MGP_CAROLIEiJ_G0019910Puf609362.995Mus_caroli
ENSEBUG00000014291puf60b8566.087ENSMUSG00000002524Puf609362.995Mus_musculus
ENSEBUG00000014291puf60b8566.087MGP_PahariEiJ_G0019920Puf609362.995Mus_pahari
ENSEBUG00000014291puf60b8566.087MGP_SPRETEiJ_G0020812Puf609362.995Mus_spretus
ENSEBUG00000014291puf60b8563.682ENSMPUG00000008137PUF609362.963Mustela_putorius_furo
ENSEBUG00000014291puf60b8464.336ENSMLUG00000013032-9861.632Myotis_lucifugus
ENSEBUG00000014291puf60b8563.176ENSMLUG00000000238-9459.866Myotis_lucifugus
ENSEBUG00000014291puf60b8565.739ENSNGAG00000000712Puf6010061.017Nannospalax_galili
ENSEBUG00000014291puf60b8463.667ENSNBRG00000017223-9861.158Neolamprologus_brichardi
ENSEBUG00000014291puf60b7159.481ENSNBRG00000013047puf60b9755.668Neolamprologus_brichardi
ENSEBUG00000014291puf60b8565.739ENSNLEG00000002156PUF609862.803Nomascus_leucogenys
ENSEBUG00000014291puf60b5671.667ENSOPRG00000002147PUF607072.222Ochotona_princeps
ENSEBUG00000014291puf60b8146.655ENSODEG00000015513-9546.935Octodon_degus
ENSEBUG00000014291puf60b6468.571ENSODEG00000014024-9068.571Octodon_degus
ENSEBUG00000014291puf60b8461.630ENSONIG00000006247puf60b9759.291Oreochromis_niloticus
ENSEBUG00000014291puf60b8463.837ENSONIG00000014030-9761.395Oreochromis_niloticus
ENSEBUG00000014291puf60b5970.800ENSOANG00000006962PUF608470.000Ornithorhynchus_anatinus
ENSEBUG00000014291puf60b8463.636ENSORLG00000012279puf60b10059.291Oryzias_latipes
ENSEBUG00000014291puf60b8460.811ENSORLG00000028655-9958.545Oryzias_latipes
ENSEBUG00000014291puf60b8461.800ENSORLG00020007333puf6010059.291Oryzias_latipes_hni
ENSEBUG00000014291puf60b8461.224ENSORLG00020018144-9758.944Oryzias_latipes_hni
ENSEBUG00000014291puf60b8461.929ENSORLG00015007718puf60b10059.259Oryzias_latipes_hsok
ENSEBUG00000014291puf60b8461.224ENSORLG00015016833-9758.944Oryzias_latipes_hsok
ENSEBUG00000014291puf60b8462.309ENSOMEG00000001643puf60b10059.478Oryzias_melastigma
ENSEBUG00000014291puf60b8464.035ENSOMEG00000022185-9759.556Oryzias_melastigma
ENSEBUG00000014291puf60b8563.851ENSOGAG00000006259PUF609460.535Otolemur_garnettii
ENSEBUG00000014291puf60b8462.906ENSOARG00000016235PUF609863.158Ovis_aries
ENSEBUG00000014291puf60b8565.739ENSPPAG00000029933PUF609860.672Pan_paniscus
ENSEBUG00000014291puf60b8466.490ENSPPRG00000003257PUF6010063.351Panthera_pardus
ENSEBUG00000014291puf60b8466.434ENSPTIG00000009795PUF609961.616Panthera_tigris_altaica
ENSEBUG00000014291puf60b8565.739ENSPTRG00000043963-9860.672Pan_troglodytes
ENSEBUG00000014291puf60b8565.739ENSPTRG00000020670PUF609860.672Pan_troglodytes
ENSEBUG00000014291puf60b8565.739ENSPANG00000021936PUF609860.672Papio_anubis
ENSEBUG00000014291puf60b8762.689ENSPKIG00000004295puf60a9959.866Paramormyrops_kingsleyae
ENSEBUG00000014291puf60b8364.851ENSPKIG00000012204puf60b9962.105Paramormyrops_kingsleyae
ENSEBUG00000014291puf60b8464.177ENSPSIG00000004679PUF609961.046Pelodiscus_sinensis
ENSEBUG00000014291puf60b8462.544ENSPMGG00000013444puf60b9960.417Periophthalmus_magnuspinnatus
ENSEBUG00000014291puf60b8466.314ENSPEMG00000008820Puf609163.176Peromyscus_maniculatus_bairdii
ENSEBUG00000014291puf60b8864.214ENSPCIG00000020270PUF609861.017Phascolarctos_cinereus
ENSEBUG00000014291puf60b8462.264ENSPFOG00000011118-9760.481Poecilia_formosa
ENSEBUG00000014291puf60b8462.087ENSPFOG00000019217puf60b10061.246Poecilia_formosa
ENSEBUG00000014291puf60b8462.413ENSPLAG00000010754puf60b10061.565Poecilia_latipinna
ENSEBUG00000014291puf60b8461.815ENSPLAG00000017025-9060.137Poecilia_latipinna
ENSEBUG00000014291puf60b8462.413ENSPMEG00000000838puf60b10061.565Poecilia_mexicana
ENSEBUG00000014291puf60b8462.436ENSPMEG00000009767-9060.653Poecilia_mexicana
ENSEBUG00000014291puf60b8461.969ENSPREG00000005440puf60b10060.174Poecilia_reticulata
ENSEBUG00000014291puf60b6961.031ENSPPYG00000018951-9556.735Pongo_abelii
ENSEBUG00000014291puf60b6962.680ENSPCAG00000014837PUF6010058.656Procavia_capensis
ENSEBUG00000014291puf60b8565.913ENSPCOG00000027981PUF609960.840Propithecus_coquereli
ENSEBUG00000014291puf60b7873.333ENSPVAG00000016167PUF608172.121Pteropus_vampyrus
ENSEBUG00000014291puf60b8461.630ENSPNYG00000002556puf60b10059.291Pundamilia_nyererei
ENSEBUG00000014291puf60b8463.667ENSPNYG00000004273-9861.224Pundamilia_nyererei
ENSEBUG00000014291puf60b8463.103ENSPNAG00000019909puf60a9960.825Pygocentrus_nattereri
ENSEBUG00000014291puf60b8161.191ENSPNAG00000019415puf60b8759.747Pygocentrus_nattereri
ENSEBUG00000014291puf60b8566.087ENSRNOG00000009960Puf609362.995Rattus_norvegicus
ENSEBUG00000014291puf60b8565.739ENSRBIG00000035274PUF609860.672Rhinopithecus_bieti
ENSEBUG00000014291puf60b8565.739ENSRROG00000029360PUF609960.672Rhinopithecus_roxellana
ENSEBUG00000014291puf60b8464.860ENSSBOG00000027089PUF609761.485Saimiri_boliviensis_boliviensis
ENSEBUG00000014291puf60b7763.080ENSSHAG00000006668PUF609059.779Sarcophilus_harrisii
ENSEBUG00000014291puf60b8463.283ENSSFOG00015019371puf60a9960.642Scleropages_formosus
ENSEBUG00000014291puf60b8460.633ENSSFOG00015019619puf60b10057.895Scleropages_formosus
ENSEBUG00000014291puf60b5575.758ENSSMAG00000016381puf60b7175.758Scophthalmus_maximus
ENSEBUG00000014291puf60b8462.479ENSSDUG00000009935puf60b10058.957Seriola_dumerili
ENSEBUG00000014291puf60b8363.248ENSSDUG00000007048-9760.171Seriola_dumerili
ENSEBUG00000014291puf60b8463.959ENSSLDG00000007366-9960.914Seriola_lalandi_dorsalis
ENSEBUG00000014291puf60b8463.986ENSSLDG00000024011puf60b9861.285Seriola_lalandi_dorsalis
ENSEBUG00000014291puf60b5859.343ENSSPUG00000013518PUF609256.171Sphenodon_punctatus
ENSEBUG00000014291puf60b8463.986ENSSPAG00000012144puf60b9861.285Stegastes_partitus
ENSEBUG00000014291puf60b8462.712ENSSPAG00000020285-10061.591Stegastes_partitus
ENSEBUG00000014291puf60b8565.739ENSSSCG00000038800PUF609763.176Sus_scrofa
ENSEBUG00000014291puf60b8463.203ENSTGUG00000012797-9959.560Taeniopygia_guttata
ENSEBUG00000014291puf60b8463.811ENSTRUG00000005420puf60b9861.111Takifugu_rubripes
ENSEBUG00000014291puf60b8463.958ENSTRUG00000008843-10062.367Takifugu_rubripes
ENSEBUG00000014291puf60b8461.800ENSTNIG00000013675puf60b9959.122Tetraodon_nigroviridis
ENSEBUG00000014291puf60b8459.622ENSTNIG00000003069-9959.310Tetraodon_nigroviridis
ENSEBUG00000014291puf60b5263.143ENSTBEG00000002751-9662.571Tupaia_belangeri
ENSEBUG00000014291puf60b6550.739ENSTBEG00000001899-10049.020Tupaia_belangeri
ENSEBUG00000014291puf60b8463.527ENSTTRG00000017088PUF6010061.499Tursiops_truncatus
ENSEBUG00000014291puf60b8565.739ENSUAMG00000024917PUF609860.672Ursus_americanus
ENSEBUG00000014291puf60b8559.628ENSUMAG00000000272PUF609456.471Ursus_maritimus
ENSEBUG00000014291puf60b8565.739ENSVVUG00000022527PUF6010061.017Vulpes_vulpes
ENSEBUG00000014291puf60b8465.729ENSXETG00000012469puf609863.130Xenopus_tropicalis
ENSEBUG00000014291puf60b8462.413ENSXCOG00000012355puf60b10061.565Xiphophorus_couchianus
ENSEBUG00000014291puf60b8463.796ENSXMAG00000010507-9862.148Xiphophorus_maculatus
ENSEBUG00000014291puf60b8462.587ENSXMAG00000001862puf60b10059.459Xiphophorus_maculatus

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