EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000014402 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 62668 bases
Position: chrFYBX02006101.1:90818-153485
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000023384	DEAD	PF00270.29	1.7e-47	1	1
ENSEBUP00000023415	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000023991	-	5534	-	ENSEBUP00000023415	676 (aa)	-	-
ENSEBUT00000023960	-	5853	-	ENSEBUP00000023384	648 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000014402	-	61	34.550	ENSEBUG00000007713	ddx59	64	33.696
ENSEBUG00000014402	-	70	41.739	ENSEBUG00000004340	ddx5	82	40.909
ENSEBUG00000014402	-	59	31.095	ENSEBUG00000001119	zgc:193690	70	31.105
ENSEBUG00000014402	-	59	37.838	ENSEBUG00000003319	ddx23	59	38.142
ENSEBUG00000014402	-	62	50.725	ENSEBUG00000003290	-	81	50.483
ENSEBUG00000014402	-	52	33.053	ENSEBUG00000007071	ddx55	58	32.448
ENSEBUG00000014402	-	64	64.516	ENSEBUG00000007692	ddx3xa	68	73.913
ENSEBUG00000014402	-	58	36.842	ENSEBUG00000004326	ddx27	57	36.842
ENSEBUG00000014402	-	70	40.127	ENSEBUG00000011578	ddx5	61	44.527
ENSEBUG00000014402	-	61	40.488	ENSEBUG00000002053	DDX41	66	40.148
ENSEBUG00000014402	-	65	33.412	ENSEBUG00000003713	eif4a3	92	33.176
ENSEBUG00000014402	-	59	31.250	ENSEBUG00000007794	ddx10	54	31.868
ENSEBUG00000014402	-	72	37.872	ENSEBUG00000001155	ddx42	55	36.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014402	-	75	55.268	WBGene00002244	laf-1	73	57.569	Caenorhabditis_elegans
ENSEBUG00000014402	-	71	67.447	ENSCING00000007637	-	71	66.809	Ciona_intestinalis
ENSEBUG00000014402	-	72	63.617	FBgn0263231	bel	60	63.825	Drosophila_melanogaster
ENSEBUG00000014402	-	71	77.542	ENSPMAG00000003524	-	87	76.744	Petromyzon_marinus
ENSEBUG00000014402	-	70	58.030	YOR204W	DED1	85	53.686	Saccharomyces_cerevisiae