EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000014444 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 95497 bases
Position: chrFYBX02010566.1:1534643-1630139
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000023448	TRM13	PF05206.14	2.7e-78	1	1
ENSEBUP00000023464	TRM13	PF05206.14	2.7e-78	1	1
ENSEBUP00000023479	TRM13	PF05206.14	4.2e-78	1	1
ENSEBUP00000023561	TRM13	PF05206.14	2.7e-77	1	1
ENSEBUP00000023549	TRM13	PF05206.14	1.3e-73	1	1
ENSEBUP00000023500	TRM13	PF05206.14	4.2e-61	1	1
ENSEBUP00000023549	zf-U11-48K	PF05253.12	4.2e-09	1	1
ENSEBUP00000023500	zf-U11-48K	PF05253.12	4.6e-09	1	1
ENSEBUP00000023479	zf-U11-48K	PF05253.12	4.9e-09	1	1
ENSEBUP00000023549	zf-TRM13_CCCH	PF11722.8	5.1e-09	1	1
ENSEBUP00000023500	zf-TRM13_CCCH	PF11722.8	5.4e-09	1	1
ENSEBUP00000023479	zf-TRM13_CCCH	PF11722.8	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000024055	-	1631	-	ENSEBUP00000023479	457 (aa)	-	-
ENSEBUT00000024040	-	1902	-	ENSEBUP00000023464	390 (aa)	-	-
ENSEBUT00000024076	-	1556	-	ENSEBUP00000023500	432 (aa)	-	-
ENSEBUT00000024138	-	2045	-	ENSEBUP00000023561	364 (aa)	-	-
ENSEBUT00000024024	-	1645	-	ENSEBUP00000023448	390 (aa)	-	-
ENSEBUT00000024126	-	1481	-	ENSEBUP00000023549	407 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014444	trmt13	96	45.474	ENSG00000122435	TRMT13	95	45.396	Homo_sapiens
ENSEBUG00000014444	trmt13	96	41.393	ENSAPOG00000015131	trmt13	98	41.837	Acanthochromis_polyacanthus
ENSEBUG00000014444	trmt13	96	46.436	ENSAMEG00000008917	TRMT13	94	46.436	Ailuropoda_melanoleuca
ENSEBUG00000014444	trmt13	97	46.154	ENSACIG00000005804	trmt13	94	44.658	Amphilophus_citrinellus
ENSEBUG00000014444	trmt13	96	40.862	ENSAOCG00000023585	trmt13	98	40.862	Amphiprion_ocellaris
ENSEBUG00000014444	trmt13	96	41.068	ENSAPEG00000004025	trmt13	98	41.068	Amphiprion_percula
ENSEBUG00000014444	trmt13	96	45.652	ENSATEG00000006597	trmt13	95	45.435	Anabas_testudineus
ENSEBUG00000014444	trmt13	94	44.703	ENSAPLG00000014924	TRMT13	98	47.981	Anas_platyrhynchos
ENSEBUG00000014444	trmt13	96	47.277	ENSACAG00000003498	TRMT13	96	46.841	Anolis_carolinensis
ENSEBUG00000014444	trmt13	96	45.022	ENSANAG00000019525	TRMT13	95	44.946	Aotus_nancymaae
ENSEBUG00000014444	trmt13	96	44.420	ENSACLG00000020018	trmt13	97	44.420	Astatotilapia_calliptera
ENSEBUG00000014444	trmt13	96	45.532	ENSAMXG00000017963	trmt13	97	45.319	Astyanax_mexicanus
ENSEBUG00000014444	trmt13	96	45.887	ENSBTAG00000015781	TRMT13	94	45.887	Bos_taurus
ENSEBUG00000014444	trmt13	97	44.828	ENSCJAG00000000200	TRMT13	86	57.252	Callithrix_jacchus
ENSEBUG00000014444	trmt13	80	47.152	ENSCAFG00000020021	TRMT13	97	47.152	Canis_familiaris
ENSEBUG00000014444	trmt13	56	50.388	ENSCAFG00020011572	TRMT13	89	50.388	Canis_lupus_dingo
ENSEBUG00000014444	trmt13	96	45.671	ENSCHIG00000015395	TRMT13	94	45.671	Capra_hircus
ENSEBUG00000014444	trmt13	99	44.513	ENSTSYG00000010811	TRMT13	98	45.397	Carlito_syrichta
ENSEBUG00000014444	trmt13	67	43.431	ENSCAPG00000009085	TRMT13	87	43.772	Cavia_aperea
ENSEBUG00000014444	trmt13	96	46.421	ENSCPOG00000000694	TRMT13	94	46.421	Cavia_porcellus
ENSEBUG00000014444	trmt13	96	45.455	ENSCCAG00000023772	TRMT13	95	45.376	Cebus_capucinus
ENSEBUG00000014444	trmt13	96	45.455	ENSCATG00000033556	TRMT13	95	45.376	Cercocebus_atys
ENSEBUG00000014444	trmt13	94	43.158	ENSCLAG00000008220	TRMT13	98	45.894	Chinchilla_lanigera
ENSEBUG00000014444	trmt13	96	45.671	ENSCSAG00000001506	TRMT13	95	45.591	Chlorocebus_sabaeus
ENSEBUG00000014444	trmt13	96	47.391	ENSCPBG00000026671	TRMT13	94	47.277	Chrysemys_picta_bellii
ENSEBUG00000014444	trmt13	96	45.671	ENSCANG00000034659	TRMT13	95	45.591	Colobus_angolensis_palliatus
ENSEBUG00000014444	trmt13	97	45.203	ENSCGRG00001021601	Trmt13	95	45.182	Cricetulus_griseus_chok1gshd
ENSEBUG00000014444	trmt13	64	42.745	ENSCGRG00000000093	-	96	42.745	Cricetulus_griseus_crigri
ENSEBUG00000014444	trmt13	96	46.501	ENSCSEG00000000591	trmt13	96	46.501	Cynoglossus_semilaevis
ENSEBUG00000014444	trmt13	96	44.563	ENSCVAG00000017342	trmt13	92	44.563	Cyprinodon_variegatus
ENSEBUG00000014444	trmt13	96	47.007	ENSDARG00000102846	trmt13	95	47.007	Danio_rerio
ENSEBUG00000014444	trmt13	56	50.579	ENSDNOG00000001710	TRMT13	79	50.579	Dasypus_novemcinctus
ENSEBUG00000014444	trmt13	97	44.968	ENSDORG00000015808	Trmt13	95	44.968	Dipodomys_ordii
ENSEBUG00000014444	trmt13	99	33.249	FBgn0037435	CG18048	93	34.354	Drosophila_melanogaster
ENSEBUG00000014444	trmt13	96	41.469	ENSETEG00000005819	TRMT13	95	41.469	Echinops_telfairi
ENSEBUG00000014444	trmt13	96	44.924	ENSEASG00005015918	TRMT13	95	44.924	Equus_asinus_asinus
ENSEBUG00000014444	trmt13	96	44.924	ENSECAG00000022626	TRMT13	95	44.924	Equus_caballus
ENSEBUG00000014444	trmt13	77	54.717	ENSEEUG00000000294	TRMT13	73	54.717	Erinaceus_europaeus
ENSEBUG00000014444	trmt13	96	44.783	ENSELUG00000003803	trmt13	96	45.217	Esox_lucius
ENSEBUG00000014444	trmt13	96	46.320	ENSFCAG00000030618	TRMT13	94	46.320	Felis_catus
ENSEBUG00000014444	trmt13	96	48.696	ENSFALG00000002424	TRMT13	96	48.291	Ficedula_albicollis
ENSEBUG00000014444	trmt13	96	46.336	ENSFDAG00000006342	TRMT13	94	46.336	Fukomys_damarensis
ENSEBUG00000014444	trmt13	82	46.234	ENSFHEG00000022954	trmt13	90	48.238	Fundulus_heteroclitus
ENSEBUG00000014444	trmt13	96	44.671	ENSGMOG00000013223	trmt13	99	44.270	Gadus_morhua
ENSEBUG00000014444	trmt13	96	47.484	ENSGALG00000005290	TRMT13	95	48.148	Gallus_gallus
ENSEBUG00000014444	trmt13	79	46.505	ENSGAFG00000001577	trmt13	80	46.505	Gambusia_affinis
ENSEBUG00000014444	trmt13	96	44.130	ENSGACG00000013428	trmt13	82	58.537	Gasterosteus_aculeatus
ENSEBUG00000014444	trmt13	96	48.812	ENSGAGG00000023303	TRMT13	93	54.615	Gopherus_agassizii
ENSEBUG00000014444	trmt13	96	45.474	ENSGGOG00000005616	TRMT13	95	45.396	Gorilla_gorilla
ENSEBUG00000014444	trmt13	96	44.766	ENSHBUG00000007754	trmt13	97	44.766	Haplochromis_burtoni
ENSEBUG00000014444	trmt13	96	45.356	ENSHGLG00000002164	TRMT13	94	45.356	Heterocephalus_glaber_female
ENSEBUG00000014444	trmt13	96	45.356	ENSHGLG00100001618	TRMT13	94	45.356	Heterocephalus_glaber_male
ENSEBUG00000014444	trmt13	96	45.824	ENSHCOG00000020553	trmt13	96	45.824	Hippocampus_comes
ENSEBUG00000014444	trmt13	96	45.098	ENSIPUG00000024787	trmt13	96	45.534	Ictalurus_punctatus
ENSEBUG00000014444	trmt13	96	44.828	ENSSTOG00000013483	TRMT13	95	44.946	Ictidomys_tridecemlineatus
ENSEBUG00000014444	trmt13	96	43.991	ENSJJAG00000018012	Trmt13	95	43.966	Jaculus_jaculus
ENSEBUG00000014444	trmt13	80	46.302	ENSKMAG00000007639	trmt13	92	47.368	Kryptolebias_marmoratus
ENSEBUG00000014444	trmt13	96	41.970	ENSLBEG00000020238	trmt13	98	42.553	Labrus_bergylta
ENSEBUG00000014444	trmt13	96	46.237	ENSLACG00000013153	TRMT13	99	44.665	Latimeria_chalumnae
ENSEBUG00000014444	trmt13	97	47.122	ENSLOCG00000000418	trmt13	96	47.335	Lepisosteus_oculatus
ENSEBUG00000014444	trmt13	88	44.865	ENSLAFG00000002383	TRMT13	97	44.865	Loxodonta_africana
ENSEBUG00000014444	trmt13	96	45.671	ENSMFAG00000034681	TRMT13	95	45.591	Macaca_fascicularis
ENSEBUG00000014444	trmt13	96	45.671	ENSMMUG00000004243	TRMT13	95	45.591	Macaca_mulatta
ENSEBUG00000014444	trmt13	96	45.671	ENSMNEG00000036102	TRMT13	95	45.591	Macaca_nemestrina
ENSEBUG00000014444	trmt13	96	45.671	ENSMLEG00000034258	TRMT13	95	45.591	Mandrillus_leucophaeus
ENSEBUG00000014444	trmt13	96	42.919	ENSMAMG00000016597	trmt13	95	42.919	Mastacembelus_armatus
ENSEBUG00000014444	trmt13	96	44.201	ENSMZEG00005020959	trmt13	97	44.201	Maylandia_zebra
ENSEBUG00000014444	trmt13	94	45.833	ENSMGAG00000006970	TRMT13	98	48.926	Meleagris_gallopavo
ENSEBUG00000014444	trmt13	96	44.872	ENSMAUG00000010448	Trmt13	94	44.850	Mesocricetus_auratus
ENSEBUG00000014444	trmt13	96	45.494	ENSMICG00000005283	TRMT13	95	45.416	Microcebus_murinus
ENSEBUG00000014444	trmt13	96	45.279	ENSMOCG00000019914	Trmt13	94	45.259	Microtus_ochrogaster
ENSEBUG00000014444	trmt13	60	41.522	ENSMMOG00000007762	trmt13	97	40.830	Mola_mola
ENSEBUG00000014444	trmt13	97	45.591	ENSMODG00000003646	TRMT13	95	45.788	Monodelphis_domestica
ENSEBUG00000014444	trmt13	96	43.973	ENSMALG00000020965	trmt13	95	43.973	Monopterus_albus
ENSEBUG00000014444	trmt13	96	45.356	MGP_CAROLIEiJ_G0025568	Trmt13	94	46.429	Mus_caroli
ENSEBUG00000014444	trmt13	96	45.788	ENSMUSG00000033439	Trmt13	94	47.619	Mus_musculus
ENSEBUG00000014444	trmt13	96	44.946	MGP_PahariEiJ_G0027014	Trmt13	83	58.182	Mus_pahari
ENSEBUG00000014444	trmt13	96	46.220	MGP_SPRETEiJ_G0026518	Trmt13	94	47.619	Mus_spretus
ENSEBUG00000014444	trmt13	88	47.143	ENSMPUG00000002078	-	94	47.143	Mustela_putorius_furo
ENSEBUG00000014444	trmt13	96	45.223	ENSMLUG00000002124	TRMT13	94	45.416	Myotis_lucifugus
ENSEBUG00000014444	trmt13	96	43.379	ENSNBRG00000006783	trmt13	95	43.379	Neolamprologus_brichardi
ENSEBUG00000014444	trmt13	97	45.376	ENSNLEG00000035917	TRMT13	95	45.376	Nomascus_leucogenys
ENSEBUG00000014444	trmt13	53	43.723	ENSMEUG00000013346	-	92	43.723	Notamacropus_eugenii
ENSEBUG00000014444	trmt13	65	58.974	ENSOPRG00000012048	TRMT13	61	58.974	Ochotona_princeps
ENSEBUG00000014444	trmt13	96	44.866	ENSONIG00000004574	trmt13	97	44.866	Oreochromis_niloticus
ENSEBUG00000014444	trmt13	94	42.159	ENSOANG00000012057	TRMT13	97	45.390	Ornithorhynchus_anatinus
ENSEBUG00000014444	trmt13	96	45.824	ENSOCUG00000023095	TRMT13	95	46.022	Oryctolagus_cuniculus
ENSEBUG00000014444	trmt13	96	42.161	ENSORLG00000003320	trmt13	97	42.950	Oryzias_latipes
ENSEBUG00000014444	trmt13	96	43.601	ENSORLG00020005972	trmt13	96	42.950	Oryzias_latipes_hni
ENSEBUG00000014444	trmt13	96	45.356	ENSORLG00015002270	trmt13	97	45.356	Oryzias_latipes_hsok
ENSEBUG00000014444	trmt13	96	46.039	ENSOMEG00000006724	trmt13	92	46.581	Oryzias_melastigma
ENSEBUG00000014444	trmt13	96	45.022	ENSOGAG00000005618	TRMT13	92	45.022	Otolemur_garnettii
ENSEBUG00000014444	trmt13	96	45.671	ENSOARG00000017983	TRMT13	94	45.671	Ovis_aries
ENSEBUG00000014444	trmt13	96	45.474	ENSPPAG00000043736	TRMT13	95	45.396	Pan_paniscus
ENSEBUG00000014444	trmt13	96	46.104	ENSPPRG00000003424	TRMT13	94	46.104	Panthera_pardus
ENSEBUG00000014444	trmt13	96	46.104	ENSPTIG00000018598	TRMT13	94	46.104	Panthera_tigris_altaica
ENSEBUG00000014444	trmt13	96	45.690	ENSPTRG00000001001	TRMT13	95	45.610	Pan_troglodytes
ENSEBUG00000014444	trmt13	96	45.671	ENSPANG00000007598	TRMT13	95	45.591	Papio_anubis
ENSEBUG00000014444	trmt13	97	47.484	ENSPKIG00000001514	trmt13	97	47.253	Paramormyrops_kingsleyae
ENSEBUG00000014444	trmt13	88	44.917	ENSPSIG00000012703	TRMT13	99	44.917	Pelodiscus_sinensis
ENSEBUG00000014444	trmt13	96	46.275	ENSPMGG00000013298	trmt13	92	46.275	Periophthalmus_magnuspinnatus
ENSEBUG00000014444	trmt13	96	44.968	ENSPEMG00000000275	Trmt13	94	44.035	Peromyscus_maniculatus_bairdii
ENSEBUG00000014444	trmt13	96	43.305	ENSPMAG00000000823	trmt13	96	43.305	Petromyzon_marinus
ENSEBUG00000014444	trmt13	97	46.237	ENSPCIG00000007699	TRMT13	95	46.652	Phascolarctos_cinereus
ENSEBUG00000014444	trmt13	96	44.934	ENSPFOG00000008675	trmt13	94	44.714	Poecilia_formosa
ENSEBUG00000014444	trmt13	96	43.844	ENSPLAG00000009709	trmt13	98	43.844	Poecilia_latipinna
ENSEBUG00000014444	trmt13	96	44.565	ENSPMEG00000022954	trmt13	98	44.565	Poecilia_mexicana
ENSEBUG00000014444	trmt13	82	45.596	ENSPREG00000005645	trmt13	90	46.099	Poecilia_reticulata
ENSEBUG00000014444	trmt13	96	45.671	ENSPPYG00000001120	TRMT13	95	45.591	Pongo_abelii
ENSEBUG00000014444	trmt13	97	44.968	ENSPCAG00000002340	TRMT13	95	44.968	Procavia_capensis
ENSEBUG00000014444	trmt13	96	46.121	ENSPCOG00000017984	TRMT13	94	46.121	Propithecus_coquereli
ENSEBUG00000014444	trmt13	96	46.220	ENSPVAG00000017430	TRMT13	95	46.137	Pteropus_vampyrus
ENSEBUG00000014444	trmt13	96	43.833	ENSPNYG00000013690	trmt13	97	43.833	Pundamilia_nyererei
ENSEBUG00000014444	trmt13	96	45.534	ENSPNAG00000022130	trmt13	97	45.534	Pygocentrus_nattereri
ENSEBUG00000014444	trmt13	96	44.872	ENSRNOG00000015140	Trmt13	92	44.872	Rattus_norvegicus
ENSEBUG00000014444	trmt13	96	45.671	ENSRBIG00000037686	TRMT13	95	45.591	Rhinopithecus_bieti
ENSEBUG00000014444	trmt13	96	45.671	ENSRROG00000044057	TRMT13	95	45.591	Rhinopithecus_roxellana
ENSEBUG00000014444	trmt13	97	45.376	ENSSBOG00000026541	TRMT13	95	45.376	Saimiri_boliviensis_boliviensis
ENSEBUG00000014444	trmt13	94	44.872	ENSSHAG00000005213	TRMT13	95	47.086	Sarcophilus_harrisii
ENSEBUG00000014444	trmt13	96	45.111	ENSSFOG00015017560	trmt13	96	45.333	Scleropages_formosus
ENSEBUG00000014444	trmt13	96	43.723	ENSSMAG00000014592	trmt13	94	43.723	Scophthalmus_maximus
ENSEBUG00000014444	trmt13	96	44.156	ENSSDUG00000015508	trmt13	79	59.259	Seriola_dumerili
ENSEBUG00000014444	trmt13	96	43.290	ENSSLDG00000019060	trmt13	80	59.259	Seriola_lalandi_dorsalis
ENSEBUG00000014444	trmt13	96	42.333	ENSSARG00000010344	TRMT13	96	42.333	Sorex_araneus
ENSEBUG00000014444	trmt13	96	48.261	ENSSPUG00000016339	TRMT13	98	48.261	Sphenodon_punctatus
ENSEBUG00000014444	trmt13	99	43.006	ENSSPAG00000011922	trmt13	98	43.006	Stegastes_partitus
ENSEBUG00000014444	trmt13	97	44.946	ENSSSCG00000006869	TRMT13	95	44.946	Sus_scrofa
ENSEBUG00000014444	trmt13	96	48.478	ENSTGUG00000005253	TRMT13	97	48.478	Taeniopygia_guttata
ENSEBUG00000014444	trmt13	96	44.060	ENSTRUG00000008400	trmt13	96	44.060	Takifugu_rubripes
ENSEBUG00000014444	trmt13	94	32.990	ENSTBEG00000008911	TRMT13	98	35.122	Tupaia_belangeri
ENSEBUG00000014444	trmt13	96	45.119	ENSUAMG00000017251	TRMT13	95	45.376	Ursus_americanus
ENSEBUG00000014444	trmt13	96	46.220	ENSUMAG00000007901	TRMT13	97	46.934	Ursus_maritimus
ENSEBUG00000014444	trmt13	84	59.259	ENSVPAG00000001034	TRMT13	82	69.048	Vicugna_pacos
ENSEBUG00000014444	trmt13	96	45.396	ENSVVUG00000021996	TRMT13	94	45.396	Vulpes_vulpes
ENSEBUG00000014444	trmt13	96	45.556	ENSXETG00000013204	trmt13	96	45.556	Xenopus_tropicalis
ENSEBUG00000014444	trmt13	96	44.902	ENSXMAG00000010765	trmt13	98	44.902	Xiphophorus_maculatus